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Moc08g26340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g26340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr8:18900872..18903088
RNA-Seq ExpressionMoc08g26340
SyntenyMoc08g26340
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]2.5e-1974.63Show/hide
Query:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        +   +FVLQEDCPQA APNAT+AVR AYD+WIKAND AK+YILA IS+VLAKKHED +TAKEI+ SL
Subjt:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]7.0e-2280.6Show/hide
Query:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        +   RFVLQEDCPQAPAPNATMAVRNAYD+WIKAND AK+YIL+ IS+VLAKKHED VTAKEI+ SL
Subjt:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

XP_022156751.1 uncharacterized protein LOC111023591 [Momordica charantia]4.4e-1673.02Show/hide
Query:  RFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        RFVL E CPQAP  NA  A ++AYD+WIKAND AKIYILA ISNVLAKKH+ MVTA+EI+ SL
Subjt:  RFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]2.8e-1873.13Show/hide
Query:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        +   RFVLQEDCPQAPAPNAT+AVRN YD+WIKAND AK+ ILA IS+VLAKKHE+ V  KEI+ SL
Subjt:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]1.5e-1974.63Show/hide
Query:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        +   RFVLQEDCPQAP  NAT+AVRNAYD+WIK+ND AK+YILA IS+VLAKKHED VT KEI+ SL
Subjt:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200951.2e-1974.63Show/hide
Query:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        +   +FVLQEDCPQA APNAT+AVR AYD+WIKAND AK+YILA IS+VLAKKHED +TAKEI+ SL
Subjt:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

A0A6J1DMS3 uncharacterized protein LOC1110220003.4e-2280.6Show/hide
Query:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        +   RFVLQEDCPQAPAPNATMAVRNAYD+WIKAND AK+YIL+ IS+VLAKKHED VTAKEI+ SL
Subjt:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

A0A6J1DW68 uncharacterized protein LOC1110246371.3e-1873.13Show/hide
Query:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        +   RFVLQEDCPQAPAPNAT+AVRN YD+WIKAND AK+ ILA IS+VLAKKHE+ V  KEI+ SL
Subjt:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

A0A6J1DWI4 uncharacterized protein LOC1110241452.1e-1668.25Show/hide
Query:  RFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        RF+L E+CPQAP PNA  A R+AYD+WIKAND A +YIL  IS+VL+KKHE MVTA+EI+ SL
Subjt:  RFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

A0A6J1DWL0 uncharacterized protein LOC1110247347.1e-2074.63Show/hide
Query:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL
        +   RFVLQEDCPQAP  NAT+AVRNAYD+WIK+ND AK+YILA IS+VLAKKHED VT KEI+ SL
Subjt:  LSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCTCCGTCCCTGTCCCCATTTAGGTTCGTCTTACAAGAGGATTGTCCTCAAGCTCCTGCGCCTAACGCTACTATGGCGGTGCGTAACGCCTATGACCAG
TGGATCAAGGCCAACGACAACGCTAAGATCTACATCTTGGCAAGAATATCTAATGTGCTTGCTAAGAAGCACGAGGACATGGTCACTGCCAAGGAGATCATAGGC
TCGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTCTCCGTCCCTGTCCCCATTTAGGTTCGTCTTACAAGAGGATTGTCCTCAAGCTCCTGCGCCTAACGCTACTATGGCGGTGCGTAACGCCTATGACCAG
TGGATCAAGGCCAACGACAACGCTAAGATCTACATCTTGGCAAGAATATCTAATGTGCTTGCTAAGAAGCACGAGGACATGGTCACTGCCAAGGAGATCATAGGC
TCGTTGTAG
Protein sequenceShow/hide protein sequence
MHSPSLSPFRFVLQEDCPQAPAPNATMAVRNAYDQWIKANDNAKIYILARISNVLAKKHEDMVTAKEIIGSL