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Moc08g26510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g26510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr8:19075933..19077210
RNA-Seq ExpressionMoc08g26510
SyntenyMoc08g26510
Gene Ontology termsGO:0006396 - RNA processing (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN72054.1 hypothetical protein VITISV_031315 [Vitis vinifera]4.6e-0460.87Show/hide
Query:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIM
        DQ+SGKT   ARM++GLYYF+E   S KI Q  SS SS SV++QIM
Subjt:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIM

CAN79134.1 hypothetical protein VITISV_000843 [Vitis vinifera]1.2e-0457.41Show/hide
Query:  LDQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIML--CILG
        LDQ+SGKT   ARM+DGLYYF++   S KI Q  SS SS+ V++QIM+  C LG
Subjt:  LDQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIML--CILG

RVW88529.1 hypothetical protein CK203_032984 [Vitis vinifera]1.6e-0459.18Show/hide
Query:  IDLDQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIM
        I LDQ+SGKT   ARM++GLYYF++   S KI Q  SS SS+SV++QIM
Subjt:  IDLDQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIM

RVW92973.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]6.0e-0456.6Show/hide
Query:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIML--CILG
        DQ+SGKT   ARM++GLYYF +   S KI Q  SS SS+SV++QIM+  C LG
Subjt:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIML--CILG

XP_022155160.1 squamous cell carcinoma antigen recognized by T-cells 3-like [Momordica charantia]1.3e-1180.85Show/hide
Query:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIML
        D++SGKTF CARMLDGLYYFDE SGS KITQCFSS+S +SVKE+IML
Subjt:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIML

TrEMBL top hitse value%identityAlignment
A0A2N9EE05 Uncharacterized protein2.6e-0560.78Show/hide
Query:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIMLCILG
        DQ+SG+T   ARM++GLYYFD+   S K  Q FSS SSISV+EQIM  I+G
Subjt:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIMLCILG

A0A2N9FDL4 Reverse transcriptase Ty1/copia-type domain-containing protein2.6e-0560.78Show/hide
Query:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIMLCILG
        DQ+SG+T   ARM++GLYYFD+   S K  Q FSS SSISV+EQIM  I+G
Subjt:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIMLCILG

A0A2N9G304 Reverse transcriptase Ty1/copia-type domain-containing protein9.0e-0659.26Show/hide
Query:  IDLDQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIMLCILG
        I+ DQ+SG+T   ARM++GLYYFD+   S K  Q FSS SSISV+EQIM  I+G
Subjt:  IDLDQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIMLCILG

A0A2N9I543 Uncharacterized protein2.6e-0560.78Show/hide
Query:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIMLCILG
        DQ+SG+T   ARM++GLYYFD+   S K  Q FSS SSISV+EQIM  I+G
Subjt:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIMLCILG

A0A6J1DLN0 squamous cell carcinoma antigen recognized by T-cells 3-like6.4e-1280.85Show/hide
Query:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIML
        D++SGKTF CARMLDGLYYFDE SGS KITQCFSS+S +SVKE+IML
Subjt:  DQTSGKTFVCARMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCATCCTACTTCCGGCATGGTAGGTTACTATTCCAACACTCTAGTTCACGTCGCCACCTTCACCTTCGGTCCCTTCGTGCGTGATCCGCTGCCGTACGAG
CCTCAAGTCTCCGTTTTGCCGCCGTCTGCCATTGTGCGCGCCGCCGCATCATCTGTTCATCGCAGATCTGCAACGCTTCCGTTCCAACGTCGTCTACCGTTGCGC
TCACCGCCGCTATCCTCTATTCGTCGTAGATCTGCCGTGATAGAACCCCTCCGCCCCTCTTTCATAGATCTGGACCAGACCTCGGGGAAGACGTTTGTATGTGCT
AGAATGCTGGATGGCCTCTACTACTTTGATGAGCCTTCTGGTAGTACTAAAATAACTCAGTGCTTTAGTAGTGATAGTTCTATCTCTGTTAAAGAACAAATTATG
CTATGCATTTTAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGCATCCTACTTCCGGCATGGTAGGTTACTATTCCAACACTCTAGTTCACGTCGCCACCTTCACCTTCGGTCCCTTCGTGCGTGATCCGCTGCCGTACGAG
CCTCAAGTCTCCGTTTTGCCGCCGTCTGCCATTGTGCGCGCCGCCGCATCATCTGTTCATCGCAGATCTGCAACGCTTCCGTTCCAACGTCGTCTACCGTTGCGC
TCACCGCCGCTATCCTCTATTCGTCGTAGATCTGCCGTGATAGAACCCCTCCGCCCCTCTTTCATAGATCTGGACCAGACCTCGGGGAAGACGTTTGTATGTGCT
AGAATGCTGGATGGCCTCTACTACTTTGATGAGCCTTCTGGTAGTACTAAAATAACTCAGTGCTTTAGTAGTGATAGTTCTATCTCTGTTAAAGAACAAATTATG
CTATGCATTTTAGGCTAG
Protein sequenceShow/hide protein sequence
MVHPTSGMVGYYSNTLVHVATFTFGPFVRDPLPYEPQVSVLPPSAIVRAAASSVHRRSATLPFQRRLPLRSPPLSSIRRRSAVIEPLRPSFIDLDQTSGKTFVCA
RMLDGLYYFDEPSGSTKITQCFSSDSSISVKEQIMLCILG