; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g26570 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g26570
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr8:19155127..19164653
RNA-Seq ExpressionMoc08g26570
SyntenyMoc08g26570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6513861.1 hypothetical protein ZIOFF_024198 [Zingiber officinale]1.7e-0833.77Show/hide
Query:  PMAPAIEGESAVPPVLGAGETLVCGSHFAALTL-DQGNGKTIGLAKEKGGLYY--LDESIGKDSVGKDVQVYSRKNTEKDKQVQESEHISGTEIDEKNIS
        P     E ES    +LG G   +    F +  L D    +TIG  +E GGLYY  L+ +    S  K       K      ++ ES+ ++   + + + S
Subjt:  PMAPAIEGESAVPPVLGAGETLVCGSHFAALTL-DQGNGKTIGLAKEKGGLYY--LDESIGKDSVGKDVQVYSRKNTEKDKQVQESEHISGTEIDEKNIS

Query:  NEPDTIVSTNDMDLPIALRKGKRTCTQYPLSYFVSYDKLSSQYRSFMVNLT
         EP T ++ N++DLP+A+RKG R+CTQ+P+S  VSY +LS  Y +F+  L+
Subjt:  NEPDTIVSTNDMDLPIALRKGKRTCTQYPLSYFVSYDKLSSQYRSFMVNLT

KAG6519635.1 hypothetical protein ZIOFF_023132 [Zingiber officinale]6.4e-0831.54Show/hide
Query:  IEGESAVPPVLGAGETLVCGSHFAALTL-DQGNGKTIGLAKEKGGLYY--LDESIGKDSVGKDVQVYSRKNTEKDKQVQ---ESEHISGTEIDEKNISNE
        ++G  A+  V G G   +    F +  L D    +TIG  +E GGLYY  L+ +    S  K +  Y R+  ++   +    ES+ ++   + + + S E
Subjt:  IEGESAVPPVLGAGETLVCGSHFAALTL-DQGNGKTIGLAKEKGGLYY--LDESIGKDSVGKDVQVYSRKNTEKDKQVQ---ESEHISGTEIDEKNISNE

Query:  PDTIVSTNDMDLPIALRKGKRTCTQYPLSYFVSYDKLSSQYRSFMVNLT
        P   ++ N+++LP+A+RKG R+CTQ+P+S  +SY +LS  Y  F+  L+
Subjt:  PDTIVSTNDMDLPIALRKGKRTCTQYPLSYFVSYDKLSSQYRSFMVNLT

RVW27193.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.4e-0733.87Show/hide
Query:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQ-----VYSRKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTN--DMDLPIALRKGKRTCTQY
        LDQ  GKTIG A+   GLYY ++++  + + + +      +++  +   D  +  S      EI       E   I+ T   D+DLPIALRKG + CT++
Subjt:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQ-----VYSRKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTN--DMDLPIALRKGKRTCTQY

Query:  PLSYFVSYDKLSSQYRSFMVNLTR
        P++ ++SY+ LS  YRSF  N+++
Subjt:  PLSYFVSYDKLSSQYRSFMVNLTR

RVW73416.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.4e-0733.87Show/hide
Query:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQ-----VYSRKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTN--DMDLPIALRKGKRTCTQY
        LDQ  GKTIG A+   GLYY ++++  + + + +      +++  +   D  +  S      EI       E   I+ T   D+DLPIALRKG + CT++
Subjt:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQ-----VYSRKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTN--DMDLPIALRKGKRTCTQY

Query:  PLSYFVSYDKLSSQYRSFMVNLTR
        P++ ++SY+ LS  YRSF  N+++
Subjt:  PLSYFVSYDKLSSQYRSFMVNLTR

RVW85259.1 hypothetical protein CK203_046582 [Vitis vinifera]3.8e-0830.95Show/hide
Query:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGK------DVQVYSRKNTEKDKQVQESEHISGT---EIDEKNISNEPDTIVSTNDMDLPIALRKGKRTCT
        LDQ +GKTIG A+   GLYY ++++  + + +       +  +   ++     +    H   +      E  +   P  +    D+DLPIALRKG R CT
Subjt:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGK------DVQVYSRKNTEKDKQVQESEHISGT---EIDEKNISNEPDTIVSTNDMDLPIALRKGKRTCT

Query:  QYPLSYFVSYDKLSSQYRSFMVNLTR
        ++P+S ++SY  LS  YR+F  N+++
Subjt:  QYPLSYFVSYDKLSSQYRSFMVNLTR

TrEMBL top hitse value%identityAlignment
A0A371GUQ7 Uncharacterized protein (Fragment)1.5e-0736.3Show/hide
Query:  HFAALTLD---QGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQVYSRK-NTEKDKQVQE----------------SEHISGTEIDEKNISNEPDTIVST
        H + L LD   Q   + IG+AKE+GGLYYL  +  +    +DVQV  ++    +D QVQE                   I    I+E+    EP+  +  
Subjt:  HFAALTLD---QGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQVYSRK-NTEKDKQVQE----------------SEHISGTEIDEKNISNEPDTIVST

Query:  NDM-----DLPIALRKGKRTCTQYPLSYFVSYDKLSSQYRSFMVNL
        N +     D+PIALRKGKR+C +YP+S  VS D LS Q++SF+  +
Subjt:  NDM-----DLPIALRKGKRTCTQYPLSYFVSYDKLSSQYRSFMVNL

A0A438CSK0 Retrovirus-related Pol polyprotein from transposon RE11.2e-0733.33Show/hide
Query:  DQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQVYS----RKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTNDMDLPIALRKGKRTCTQYPLSY
        DQ  GKTIG A+   GLYY ++++  + + + +   S    R     D  +  S  I+         +   + +    D+DLPIALRKG R CT++P+S 
Subjt:  DQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQVYS----RKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTNDMDLPIALRKGKRTCTQYPLSY

Query:  FVSYDKLSSQYRSFMVNLTR
        ++SY  LS  YR+F  N+++
Subjt:  FVSYDKLSSQYRSFMVNLTR

A0A438CVG4 Retrovirus-related Pol polyprotein from transposon RE16.9e-0833.87Show/hide
Query:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQ-----VYSRKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTN--DMDLPIALRKGKRTCTQY
        LDQ  GKTIG A+   GLYY ++++  + + + +      +++  +   D  +  S      EI       E   I+ T   D+DLPIALRKG + CT++
Subjt:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQ-----VYSRKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTN--DMDLPIALRKGKRTCTQY

Query:  PLSYFVSYDKLSSQYRSFMVNLTR
        P++ ++SY+ LS  YRSF  N+++
Subjt:  PLSYFVSYDKLSSQYRSFMVNLTR

A0A438GMH7 Retrovirus-related Pol polyprotein from transposon RE16.9e-0833.87Show/hide
Query:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQ-----VYSRKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTN--DMDLPIALRKGKRTCTQY
        LDQ  GKTIG A+   GLYY ++++  + + + +      +++  +   D  +  S      EI       E   I+ T   D+DLPIALRKG + CT++
Subjt:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQ-----VYSRKNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTN--DMDLPIALRKGKRTCTQY

Query:  PLSYFVSYDKLSSQYRSFMVNLTR
        P++ ++SY+ LS  YRSF  N+++
Subjt:  PLSYFVSYDKLSSQYRSFMVNLTR

A0A438HLI3 Uncharacterized protein1.8e-0830.95Show/hide
Query:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGK------DVQVYSRKNTEKDKQVQESEHISGT---EIDEKNISNEPDTIVSTNDMDLPIALRKGKRTCT
        LDQ +GKTIG A+   GLYY ++++  + + +       +  +   ++     +    H   +      E  +   P  +    D+DLPIALRKG R CT
Subjt:  LDQGNGKTIGLAKEKGGLYYLDESIGKDSVGK------DVQVYSRKNTEKDKQVQESEHISGT---EIDEKNISNEPDTIVSTNDMDLPIALRKGKRTCT

Query:  QYPLSYFVSYDKLSSQYRSFMVNLTR
        ++P+S ++SY  LS  YR+F  N+++
Subjt:  QYPLSYFVSYDKLSSQYRSFMVNLTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAGTCGTCTAGTGGAAGGGGTGGTGGTGGTTCGATGAGGCCTGTCCTGCGACACATTGATTTCGTGGTTGCATCGGTACAGAAGGCTCCAGCACCGGTC
AAGTTGATAGTTGGTGGCACTGTGTTGAGGTTGAGGCAGTGGATAGTATCGGAGACGAGGCTAGGGTTTCAGTGTATGGGTCGGGGCTACGGGGGTGTACCTGAT
GGGCTACTTGTTGATGGGTTGGTCCGGTTTGGGTCGGGTGACTGGTCTAGCCTAATCCGGCCTGGTTCTGATGGACCCACATCCGGTTCGGCGACTTTGGGAGTG
TTAGGGGCCAATTTTTTGCCGATTAATATTGGTTTCGTGTCACCACTTGTTGATTCTTTGTTGGTTTATGGTGATTCTTCGTGGGTGTTTGATAAGGGCAAGCTG
GCTCAAGGTGACACATTGTCTTGGCGTGGTGTTTTTGGGTCTTCTTCTGTTTTGGCTTCTGTTCTTGATTATTTTCCCCTAGTGTTGGTGGATGGGGAGTCCATT
GCGGTTCCTTCAGCTGAGATAGTATGTGAGGAAGAGAAGCTTTGGGCCAATTTTTGGATTCTCGTCCTCCGTATGCAGTGGTTTCTCGTGTGGTTGAGACTCCTT
TATGTCTTGATATGTCTTGATAAGGCTACTGAGGAGCAGAGCCGGCTTTCTTTTTGCCCGGGTTTGGGTGCCGAAATCCCAGTTGTTGTTCCTCCTAAGGCCCCT
ATGGCCCCGGCTATTGAGGGGGAGTCTGCTGTGCCTCCAGTTTTGGGAGCAGGAGAGACTTTAGTGTGTGGGAGTCATTTTGCTGCACTGACTTTGGACCAGGGC
AATGGGAAGACAATTGGACTTGCTAAAGAAAAAGGTGGACTTTATTATCTTGATGAATCTATTGGCAAGGATAGTGTTGGGAAGGATGTTCAAGTTTATTCGAGA
AAGAACACTGAAAAAGATAAGCAAGTCCAAGAGTCTGAACATATCTCTGGAACTGAAATTGACGAGAAAAATATCAGTAATGAGCCTGACACTATAGTATCTACT
AATGATATGGATTTGCCTATTGCTTTAAGGAAGGGAAAACGAACTTGTACTCAATATCCATTATCTTACTTTGTATCATATGACAAGCTCTCAAGTCAGTATAGA
AGCTTTATGGTGAACCTTACTCGGAAGTATAAGATGGTGGCAAGTGGGAAGTTGTCTCCAATTTCTGGGGGCGGTTTTGCCCCAGATTCGGTGTTCGTGGAATGT
GTAAGGCTTGAATGCCGCCGTCATTCTTTTGAGGTTTTGGGTGGTAATCCGAATTTGATAGAAATGGTGCGGTTTGACGAGACATTGCTTCAGGCTGATCTTGTT
GAGCCTCGTATGTCTGAGCGTTGGTTCATGAGTGGGGCGTTTCTGATCATTGCCCTCTTGTGTTTCCTGTGGGTGTTGTTATTCCGAAAAGGTGGCCTTCCTTTA
GGTTTTGCCCTTTTGAGCTTTTGCTACAATCTCATGGCGCTTAAGCCTATGTTGCGTCGTTTGGGCCATACTCTAAGTGCTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAGTCGTCTAGTGGAAGGGGTGGTGGTGGTTCGATGAGGCCTGTCCTGCGACACATTGATTTCGTGGTTGCATCGGTACAGAAGGCTCCAGCACCGGTC
AAGTTGATAGTTGGTGGCACTGTGTTGAGGTTGAGGCAGTGGATAGTATCGGAGACGAGGCTAGGGTTTCAGTGTATGGGTCGGGGCTACGGGGGTGTACCTGAT
GGGCTACTTGTTGATGGGTTGGTCCGGTTTGGGTCGGGTGACTGGTCTAGCCTAATCCGGCCTGGTTCTGATGGACCCACATCCGGTTCGGCGACTTTGGGAGTG
TTAGGGGCCAATTTTTTGCCGATTAATATTGGTTTCGTGTCACCACTTGTTGATTCTTTGTTGGTTTATGGTGATTCTTCGTGGGTGTTTGATAAGGGCAAGCTG
GCTCAAGGTGACACATTGTCTTGGCGTGGTGTTTTTGGGTCTTCTTCTGTTTTGGCTTCTGTTCTTGATTATTTTCCCCTAGTGTTGGTGGATGGGGAGTCCATT
GCGGTTCCTTCAGCTGAGATAGTATGTGAGGAAGAGAAGCTTTGGGCCAATTTTTGGATTCTCGTCCTCCGTATGCAGTGGTTTCTCGTGTGGTTGAGACTCCTT
TATGTCTTGATATGTCTTGATAAGGCTACTGAGGAGCAGAGCCGGCTTTCTTTTTGCCCGGGTTTGGGTGCCGAAATCCCAGTTGTTGTTCCTCCTAAGGCCCCT
ATGGCCCCGGCTATTGAGGGGGAGTCTGCTGTGCCTCCAGTTTTGGGAGCAGGAGAGACTTTAGTGTGTGGGAGTCATTTTGCTGCACTGACTTTGGACCAGGGC
AATGGGAAGACAATTGGACTTGCTAAAGAAAAAGGTGGACTTTATTATCTTGATGAATCTATTGGCAAGGATAGTGTTGGGAAGGATGTTCAAGTTTATTCGAGA
AAGAACACTGAAAAAGATAAGCAAGTCCAAGAGTCTGAACATATCTCTGGAACTGAAATTGACGAGAAAAATATCAGTAATGAGCCTGACACTATAGTATCTACT
AATGATATGGATTTGCCTATTGCTTTAAGGAAGGGAAAACGAACTTGTACTCAATATCCATTATCTTACTTTGTATCATATGACAAGCTCTCAAGTCAGTATAGA
AGCTTTATGGTGAACCTTACTCGGAAGTATAAGATGGTGGCAAGTGGGAAGTTGTCTCCAATTTCTGGGGGCGGTTTTGCCCCAGATTCGGTGTTCGTGGAATGT
GTAAGGCTTGAATGCCGCCGTCATTCTTTTGAGGTTTTGGGTGGTAATCCGAATTTGATAGAAATGGTGCGGTTTGACGAGACATTGCTTCAGGCTGATCTTGTT
GAGCCTCGTATGTCTGAGCGTTGGTTCATGAGTGGGGCGTTTCTGATCATTGCCCTCTTGTGTTTCCTGTGGGTGTTGTTATTCCGAAAAGGTGGCCTTCCTTTA
GGTTTTGCCCTTTTGAGCTTTTGCTACAATCTCATGGCGCTTAAGCCTATGTTGCGTCGTTTGGGCCATACTCTAAGTGCTATTTAG
Protein sequenceShow/hide protein sequence
MRKSSSGRGGGGSMRPVLRHIDFVVASVQKAPAPVKLIVGGTVLRLRQWIVSETRLGFQCMGRGYGGVPDGLLVDGLVRFGSGDWSSLIRPGSDGPTSGSATLGV
LGANFLPINIGFVSPLVDSLLVYGDSSWVFDKGKLAQGDTLSWRGVFGSSSVLASVLDYFPLVLVDGESIAVPSAEIVCEEEKLWANFWILVLRMQWFLVWLRLL
YVLICLDKATEEQSRLSFCPGLGAEIPVVVPPKAPMAPAIEGESAVPPVLGAGETLVCGSHFAALTLDQGNGKTIGLAKEKGGLYYLDESIGKDSVGKDVQVYSR
KNTEKDKQVQESEHISGTEIDEKNISNEPDTIVSTNDMDLPIALRKGKRTCTQYPLSYFVSYDKLSSQYRSFMVNLTRKYKMVASGKLSPISGGGFAPDSVFVEC
VRLECRRHSFEVLGGNPNLIEMVRFDETLLQADLVEPRMSERWFMSGAFLIIALLCFLWVLLFRKGGLPLGFALLSFCYNLMALKPMLRRLGHTLSAI