; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g27490 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g27490
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:19877174..19880376
RNA-Seq ExpressionMoc08g27490
SyntenyMoc08g27490
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR021109 - Aspartic peptidase domain superfamily
IPR036397 - Ribonuclease H superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]1.0e-29158.25Show/hide
Query:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
        MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITS YSFLLGR WIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
Subjt:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV

Query:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS
        EAAEEAFESSFQSFEIANATTLHGKFGRPK RLLE AFKG+N SLDKLLRMAKNT++FGLGYKP+RGDIIRVRS+EKAKRLSRFEN ERDY RRT+PPLS
Subjt:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS

Query:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------
        HSF SAGTIHQEYD SSVVAA+TEEREQV PFVYPCPD                                                              
Subjt:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------

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Query:  ---------------ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTD
                       ATCEPIFKLLRKNNDGVWSE+CQAA DKIKQYL DPPILVPPTPGRP ILYL VTENSMGCVLGQHDDSGRKEQAIYYLSKKFTD
Subjt:  ---------------ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTD

Query:  CETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDE
        CETRYSQVEKTCCALAW  RRLRQYMLYYTTWLISKMDPIKYIFEK SLS RIAR QVLLSEYDIVYVT+KAIKGSALADYLAQQPINDYIPVKFDFPDE
Subjt:  CETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDE

Query:  YISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRD
        YISTITASEESLDPQTWTMMFDGASNELGHGIG ILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRD
Subjt:  YISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRD

Query:  VKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        VKLLPYKQLITELSQEFDE+SFDYLPRENNQV DALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPDGNPWFH+IK
Subjt:  VKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]6.0e-29257.55Show/hide
Query:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
        MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSR ASM YV
Subjt:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV

Query:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS
        E AEEAFESSFQSFEIANATTLHGKFGRPK RLLE AFKG+NGSLDKLLRMAKNT++FGLGYKP+RGDIIRVRS+EKAKRLSRFEN ERDY RR +PPL+
Subjt:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS

Query:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------
        HSF SAGTIHQEYDESSVVAA+TEEREQVGPFVY CPD                                                              
Subjt:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------

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Query:  ---------------------------ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKE
                                   ATCEPIFKLLRKNNDGV SEDCQAAFDK+KQYLQDPP+LVPPTPGR LILYLTVTENSMGCVLGQHDDSGRKE
Subjt:  ---------------------------ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKE

Query:  QAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPIN
        QAIYYLSKKFTDCETRYSQVEKTCCALAWA RRLRQYMLYYTTWLISKMDPIKYIFEKPSLSG IARWQVLLSEYDIVYVT+KAIKGSALADYLAQQPIN
Subjt:  QAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPIN

Query:  DYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLV
        DYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIG ILISPKGELYPL ARLCFDC HNMAEYEACSMGVQAA+DMKVKKLKVFGDSMLV
Subjt:  DYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLV

Query:  IHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        IHQLRGEWETRDVKLLPYKQ ITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPDG PWFH+IK
Subjt:  IHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]1.5e-29860.08Show/hide
Query:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
        MSHMRPSTVIVRAFDGAR+AVVGDIEIPIQIG CTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
Subjt:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV

Query:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS
        EAAEEAFESSFQSFEIANATTLHGKFGRPK RLLEAAFK NNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRT+PPLS
Subjt:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS

Query:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------
        HS  SAGTIHQEYDESSV AA+TEEREQV PFVYPCPD                                                              
Subjt:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------

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Query:  ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL
        ATCEPIFKLL KNNDGVWSEDCQA+FDKIKQYLQDPPILVPPTPGRPLILYLTVTENS+GCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL
Subjt:  ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL

Query:  AWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ
        AW  RRLRQYMLYYTTWLISKMDPI+YIFEKPSLSGRIARWQVLLSEYDIVYVT+KAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ
Subjt:  AWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ

Query:  TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ
        TWTMMFDGASNELGHGIG ILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKV K KVFGDSMLVIHQLRGEWE RDVKLLPYKQLITELSQ
Subjt:  TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ

Query:  EFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        EFDEISFDYLPRENNQVADALATLAVMFNLELNEDV PIKVGRRDV ASCMSIEEEPDGNPWFH+IK
Subjt:  EFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]7.5e-21096.46Show/hide
Query:  ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL
        ATCEPIFKLLRKNNDGVWSEDCQAAF+KIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL
Subjt:  ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL

Query:  AWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ
        AW  RRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVT+KAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ
Subjt:  AWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ

Query:  TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ
        TWTMMFDGASNELGH IG ILISPKGELYPLT +LCFDCTHNMAEYEACSMGVQAA+DMKVKK KVFGDS LVIHQLRGEWETRDVKLLPYKQLITELSQ
Subjt:  TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ

Query:  EFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        EFDEISFDYLPRENNQVADALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPDGNPWFH+IK
Subjt:  EFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]7.0e-25673.83Show/hide
Query:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
        MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQ  V              S+P++
Subjt:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV

Query:  EAAEE--------AFESSFQSF-------EIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLL------RMAKNTRRF--GLGYKPNRGDIIRVRSMEK
        +   +        +F   F  +       E    TTL   +G    +++    K    +  + +       M K    +   +  K  +G+       + 
Subjt:  EAAEE--------AFESSFQSF-------EIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLL------RMAKNTRRF--GLGYKPNRGDIIRVRSMEK

Query:  AKRLSRFE---NGERDYSRRTIPPLSHSFISAGTIHQEYDESSVVAAL------TEEREQVGPFVYPCP-----DATCEPIFKLLRKNNDGVWSEDCQAA
          RL +F+   N  +     T   L    +S   I  + D+   +  +       E RE +G   Y         ATCEPIFKLLRKNNDGVWSEDCQAA
Subjt:  AKRLSRFE---NGERDYSRRTIPPLSHSFISAGTIHQEYDESSVVAAL------TEEREQVGPFVYPCP-----DATCEPIFKLLRKNNDGVWSEDCQAA

Query:  FDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPI
        FDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPI
Subjt:  FDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPI

Query:  KYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPK
        KYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPK
Subjt:  KYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPK

Query:  GELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLA
        GELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLA
Subjt:  GELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLA

Query:  VMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        VMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
Subjt:  VMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H5.0e-29258.25Show/hide
Query:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
        MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITS YSFLLGR WIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
Subjt:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV

Query:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS
        EAAEEAFESSFQSFEIANATTLHGKFGRPK RLLE AFKG+N SLDKLLRMAKNT++FGLGYKP+RGDIIRVRS+EKAKRLSRFEN ERDY RRT+PPLS
Subjt:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS

Query:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------
        HSF SAGTIHQEYD SSVVAA+TEEREQV PFVYPCPD                                                              
Subjt:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------

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Query:  ---------------ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTD
                       ATCEPIFKLLRKNNDGVWSE+CQAA DKIKQYL DPPILVPPTPGRP ILYL VTENSMGCVLGQHDDSGRKEQAIYYLSKKFTD
Subjt:  ---------------ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTD

Query:  CETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDE
        CETRYSQVEKTCCALAW  RRLRQYMLYYTTWLISKMDPIKYIFEK SLS RIAR QVLLSEYDIVYVT+KAIKGSALADYLAQQPINDYIPVKFDFPDE
Subjt:  CETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDE

Query:  YISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRD
        YISTITASEESLDPQTWTMMFDGASNELGHGIG ILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRD
Subjt:  YISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRD

Query:  VKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        VKLLPYKQLITELSQEFDE+SFDYLPRENNQV DALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPDGNPWFH+IK
Subjt:  VKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

A0A6J1D099 Ribonuclease H2.9e-29257.55Show/hide
Query:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
        MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSR ASM YV
Subjt:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV

Query:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS
        E AEEAFESSFQSFEIANATTLHGKFGRPK RLLE AFKG+NGSLDKLLRMAKNT++FGLGYKP+RGDIIRVRS+EKAKRLSRFEN ERDY RR +PPL+
Subjt:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS

Query:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------
        HSF SAGTIHQEYDESSVVAA+TEEREQVGPFVY CPD                                                              
Subjt:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------

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Query:  ---------------------------ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKE
                                   ATCEPIFKLLRKNNDGV SEDCQAAFDK+KQYLQDPP+LVPPTPGR LILYLTVTENSMGCVLGQHDDSGRKE
Subjt:  ---------------------------ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKE

Query:  QAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPIN
        QAIYYLSKKFTDCETRYSQVEKTCCALAWA RRLRQYMLYYTTWLISKMDPIKYIFEKPSLSG IARWQVLLSEYDIVYVT+KAIKGSALADYLAQQPIN
Subjt:  QAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPIN

Query:  DYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLV
        DYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIG ILISPKGELYPL ARLCFDC HNMAEYEACSMGVQAA+DMKVKKLKVFGDSMLV
Subjt:  DYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLV

Query:  IHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        IHQLRGEWETRDVKLLPYKQ ITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPDG PWFH+IK
Subjt:  IHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

A0A6J1D7C7 Ribonuclease H7.2e-29960.08Show/hide
Query:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
        MSHMRPSTVIVRAFDGAR+AVVGDIEIPIQIG CTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
Subjt:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV

Query:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS
        EAAEEAFESSFQSFEIANATTLHGKFGRPK RLLEAAFK NNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRT+PPLS
Subjt:  EAAEEAFESSFQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLS

Query:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------
        HS  SAGTIHQEYDESSV AA+TEEREQV PFVYPCPD                                                              
Subjt:  HSFISAGTIHQEYDESSVVAALTEEREQVGPFVYPCPD--------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL
        ATCEPIFKLL KNNDGVWSEDCQA+FDKIKQYLQDPPILVPPTPGRPLILYLTVTENS+GCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL
Subjt:  ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL

Query:  AWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ
        AW  RRLRQYMLYYTTWLISKMDPI+YIFEKPSLSGRIARWQVLLSEYDIVYVT+KAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ
Subjt:  AWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ

Query:  TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ
        TWTMMFDGASNELGHGIG ILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKV K KVFGDSMLVIHQLRGEWE RDVKLLPYKQLITELSQ
Subjt:  TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ

Query:  EFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        EFDEISFDYLPRENNQVADALATLAVMFNLELNEDV PIKVGRRDV ASCMSIEEEPDGNPWFH+IK
Subjt:  EFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

A0A6J1DZ90 Ribonuclease H3.6e-21096.46Show/hide
Query:  ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL
        ATCEPIFKLLRKNNDGVWSEDCQAAF+KIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL
Subjt:  ATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCAL

Query:  AWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ
        AW  RRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVT+KAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ
Subjt:  AWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQ

Query:  TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ
        TWTMMFDGASNELGH IG ILISPKGELYPLT +LCFDCTHNMAEYEACSMGVQAA+DMKVKK KVFGDS LVIHQLRGEWETRDVKLLPYKQLITELSQ
Subjt:  TWTMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQ

Query:  EFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        EFDEISFDYLPRENNQVADALATLAVMFNLELNEDV PIKVGRRDVPASCMSIEEEPDGNPWFH+IK
Subjt:  EFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

A0A6J1E2J7 Ribonuclease H3.4e-25673.83Show/hide
Query:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV
        MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQ  V              S+P++
Subjt:  MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYV

Query:  EAAEE--------AFESSFQSF-------EIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLL------RMAKNTRRF--GLGYKPNRGDIIRVRSMEK
        +   +        +F   F  +       E    TTL   +G    +++    K    +  + +       M K    +   +  K  +G+       + 
Subjt:  EAAEE--------AFESSFQSF-------EIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLL------RMAKNTRRF--GLGYKPNRGDIIRVRSMEK

Query:  AKRLSRFE---NGERDYSRRTIPPLSHSFISAGTIHQEYDESSVVAAL------TEEREQVGPFVYPCP-----DATCEPIFKLLRKNNDGVWSEDCQAA
          RL +F+   N  +     T   L    +S   I  + D+   +  +       E RE +G   Y         ATCEPIFKLLRKNNDGVWSEDCQAA
Subjt:  AKRLSRFE---NGERDYSRRTIPPLSHSFISAGTIHQEYDESSVVAAL------TEEREQVGPFVYPCP-----DATCEPIFKLLRKNNDGVWSEDCQAA

Query:  FDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPI
        FDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPI
Subjt:  FDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDPI

Query:  KYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPK
        KYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPK
Subjt:  KYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPK

Query:  GELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLA
        GELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLA
Subjt:  GELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLA

Query:  VMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
        VMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK
Subjt:  VMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.8e-1228.4Show/hide
Query:  EPIFKLLRKN-NDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAW
        +P+ K L+KN      + +  +AF K+K  + + PIL  P   +   L    ++ ++G VL Q          + Y+S+   + E  YS +EK   A+ W
Subjt:  EPIFKLLRKN-NDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAW

Query:  ATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKG--SALADYLAQ
        AT+  R Y+L     + S   P+ +++     + ++ RW+V LSE+D      K IKG  + +AD L++
Subjt:  ATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKG--SALADYLAQ

P10394 Retrovirus-related Pol polyprotein from transposon 4122.9e-1027.49Show/hide
Query:  IFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATR
        I +L +KN    W+++CQ AF  +K  L +P +L  P   +   +    ++ + G VL Q+ +    +  + Y S+ FT  E+  S  E+   A+ WA  
Subjt:  IFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATR

Query:  RLRQYMLYYTTWLISKMD--PIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPIND
          R Y+  Y      K D  P+ Y+F   + S ++ R ++ L EY+      K  K + +AD L++  I +
Subjt:  RLRQYMLYYTTWLISKMD--PIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPIND

P20825 Retrovirus-related Pol polyprotein from transposon 2971.7e-1028.67Show/hide
Query:  AFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDP
        AF+K+K  +   PIL  P   +  +L    +  ++G VL Q+         I ++S+   D E  YS +EK   A+ WAT+  R Y+L     + S   P
Subjt:  AFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQVEKTCCALAWATRRLRQYMLYYTTWLISKMDP

Query:  IKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPIND
        ++++        ++ RW+V LSEY       K  K +++AD L++  I +
Subjt:  IKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPIND

P9WLH5 Bifunctional protein Rv2228c3.0e-0730.63Show/hide
Query:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLE-LNEDVSP
        T+N+AEY     G+  AV +   +  V  DS LV+ Q+ G W+ +   LL        L+ +F  I+++++PR  N  AD LA  A+    +    D  P
Subjt:  THNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLE-LNEDVSP

Query:  IKVGRRDVPAS
         K+   + P S
Subjt:  IKVGRRDVPAS

Q9HSF6 Ribonuclease HI2.6e-1136.59Show/hide
Query:  FDGAS--NELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFD
        FDGAS  N     +G +L+S  G +           T+N AEY+A    ++AA D     +++ GDS LV  QL G W+T D  L   +    EL   FD
Subjt:  FDGAS--NELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFD

Query:  EISFDYLPRENNQVADALATLAV
        + S  ++PR  N+ ADALA  A+
Subjt:  EISFDYLPRENNQVADALATLAV

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein1.6e-0828.09Show/hide
Query:  TRKAIKGSALADYLAQQPINDYIP---VKFDFPDEYISTITASEESLDPQTWTMMFDGAS--NELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEA
        T K  +    ++  ++    D +P   + +D P E +S +  S    D +T  + FDGAS  N    G   +L +  G L     +     T+N AEY A
Subjt:  TRKAIKGSALADYLAQQPINDYIP---VKFDFPDEYISTITASEESLDPQTWTMMFDGAS--NELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEA

Query:  CSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAV
          +G++ A++   K +KV GDS LV  Q++G+W+     L    +    L  +       ++ R  N  AD  A LAV
Subjt:  CSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAV

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.3e-0528.26Show/hide
Query:  PQTWTMMFDGASNELGH---GIGGILISPKGELYPLTARLCFDCTHNM--AEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGE--WETRDVKLLPY
        P  W      A+ +L +   GIG IL +  G +  + AR     T N+  AE EA    V        K++    D+  +++ L  +  W T    L P 
Subjt:  PQTWTMMFDGASNELGH---GIGGILISPKGELYPLTARLCFDCTHNM--AEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGE--WETRDVKLLPY

Query:  KQLITELSQEFDEISFDYLPRENNQVADALATLAVMFN
         + I +L   F+E+ F++ PR  N+VAD +A  ++ F+
Subjt:  KQLITELSQEFDEISFDYLPRENNQVADALATLAVMFN

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-1227.81Show/hide
Query:  GSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGAS--NELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAV
        GS  +   +  P    + ++ D      S++          + T+ FDGAS  N    G G +L +    +         + T+N+AEY A  +G+++A+
Subjt:  GSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGAS--NELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAV

Query:  DMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAV
        D   K + V GDSMLV  Q++G W+T   K+    +   EL   F      ++ RE N  AD  A  A+
Subjt:  DMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAV

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-1227.81Show/hide
Query:  GSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGAS--NELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAV
        GS  +   +  P    + ++ D      S++          + T+ FDGAS  N    G G +L +    +         + T+N+AEY A  +G+++A+
Subjt:  GSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGAS--NELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAV

Query:  DMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAV
        D   K + V GDSMLV  Q++G W+T   K+    +   EL   F      ++ RE N  AD  A  A+
Subjt:  DMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPRENNQVADALATLAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCATATGAGACCTAGTACTGTGATAGTAAGAGCTTTCGATGGAGCTCGCAGCGCTGTTGTTGGGGATATTGAGATCCCGATCCAGATAGGTCCTTGCACCTTTGA
CATAACATTTCAGGTTATGGACATCACATCAGCTTATAGTTTCTTGTTGGGGCGACCGTGGATACATTCGGCAGGAGCAGTTCCATCCACTTTACATCAGAAAATTAAGT
TTGCGGTTGACCAAAAGTTAGTGATCATATCGGGACAAGAAGACATTCTAGTCTCAAGGCTTGCTTCGATGCCATACGTTGAAGCAGCAGAAGAAGCTTTTGAGTCTTCA
TTCCAATCATTCGAGATTGCAAATGCTACAACTTTACATGGGAAGTTTGGAAGACCTAAGTCACGACTTTTAGAGGCCGCCTTTAAAGGAAACAACGGGAGTTTAGACAA
GCTGCTGAGGATGGCTAAAAACACAAGGAGGTTCGGGCTAGGATATAAGCCAAATAGAGGTGACATTATTAGAGTGCGGAGTATGGAAAAAGCAAAACGCCTCTCAAGAT
TTGAGAATGGGGAGCGTGATTACTCTAGGAGGACTATTCCACCTCTCAGTCACTCTTTCATAAGTGCCGGCACAATCCATCAAGAGTACGATGAGAGCTCTGTAGTGGCA
GCATTGACAGAAGAAAGAGAGCAAGTTGGACCTTTTGTCTACCCGTGCCCAGACGCAACTTGCGAACCCATCTTTAAATTGCTCCGCAAGAACAACGATGGGGTATGGAG
TGAAGATTGTCAAGCAGCATTCGATAAGATTAAGCAGTATTTGCAAGACCCTCCAATTCTTGTGCCACCAACTCCAGGACGACCCCTTATTTTGTATCTCACAGTGACTG
AAAACTCAATGGGATGTGTACTGGGGCAGCATGATGATTCAGGCAGGAAAGAACAGGCTATATATTATTTAAGTAAGAAGTTCACCGATTGCGAGACTAGATACTCTCAA
GTAGAAAAAACTTGTTGTGCTCTAGCTTGGGCTACTCGACGTCTAAGACAATACATGTTGTATTATACCACATGGCTCATTTCAAAGATGGACCCCATAAAGTACATTTT
TGAAAAGCCGTCTCTCTCGGGTCGAATTGCAAGGTGGCAGGTCCTCTTGTCCGAATATGATATTGTTTATGTTACTCGAAAGGCTATTAAGGGGAGTGCTTTGGCCGACT
ACCTAGCTCAACAACCTATAAATGACTACATACCGGTAAAGTTCGATTTTCCAGATGAGTATATCTCCACCATAACTGCAAGTGAGGAAAGTTTAGACCCGCAAACTTGG
ACCATGATGTTTGATGGTGCCTCTAACGAGTTAGGTCATGGGATTGGGGGTATTTTGATATCACCCAAAGGGGAACTATACCCTCTTACCGCTAGATTATGTTTTGACTG
CACACATAATATGGCCGAGTATGAAGCATGCTCGATGGGCGTCCAAGCTGCTGTTGATATGAAGGTTAAGAAACTTAAAGTTTTTGGGGATTCTATGCTAGTAATTCATC
AACTAAGAGGAGAATGGGAAACAAGAGACGTTAAGTTGTTGCCTTACAAACAACTCATAACAGAATTGTCACAAGAATTTGATGAAATCTCATTTGATTATTTGCCAAGA
GAAAATAATCAAGTAGCAGATGCATTGGCCACATTAGCGGTGATGTTCAATTTAGAACTCAATGAGGATGTCAGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTC
TTGTATGAGCATTGAGGAAGAACCCGACGGTAACCCCTGGTTTCATAACATCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCATATGAGACCTAGTACTGTGATAGTAAGAGCTTTCGATGGAGCTCGCAGCGCTGTTGTTGGGGATATTGAGATCCCGATCCAGATAGGTCCTTGCACCTTTGA
CATAACATTTCAGGTTATGGACATCACATCAGCTTATAGTTTCTTGTTGGGGCGACCGTGGATACATTCGGCAGGAGCAGTTCCATCCACTTTACATCAGAAAATTAAGT
TTGCGGTTGACCAAAAGTTAGTGATCATATCGGGACAAGAAGACATTCTAGTCTCAAGGCTTGCTTCGATGCCATACGTTGAAGCAGCAGAAGAAGCTTTTGAGTCTTCA
TTCCAATCATTCGAGATTGCAAATGCTACAACTTTACATGGGAAGTTTGGAAGACCTAAGTCACGACTTTTAGAGGCCGCCTTTAAAGGAAACAACGGGAGTTTAGACAA
GCTGCTGAGGATGGCTAAAAACACAAGGAGGTTCGGGCTAGGATATAAGCCAAATAGAGGTGACATTATTAGAGTGCGGAGTATGGAAAAAGCAAAACGCCTCTCAAGAT
TTGAGAATGGGGAGCGTGATTACTCTAGGAGGACTATTCCACCTCTCAGTCACTCTTTCATAAGTGCCGGCACAATCCATCAAGAGTACGATGAGAGCTCTGTAGTGGCA
GCATTGACAGAAGAAAGAGAGCAAGTTGGACCTTTTGTCTACCCGTGCCCAGACGCAACTTGCGAACCCATCTTTAAATTGCTCCGCAAGAACAACGATGGGGTATGGAG
TGAAGATTGTCAAGCAGCATTCGATAAGATTAAGCAGTATTTGCAAGACCCTCCAATTCTTGTGCCACCAACTCCAGGACGACCCCTTATTTTGTATCTCACAGTGACTG
AAAACTCAATGGGATGTGTACTGGGGCAGCATGATGATTCAGGCAGGAAAGAACAGGCTATATATTATTTAAGTAAGAAGTTCACCGATTGCGAGACTAGATACTCTCAA
GTAGAAAAAACTTGTTGTGCTCTAGCTTGGGCTACTCGACGTCTAAGACAATACATGTTGTATTATACCACATGGCTCATTTCAAAGATGGACCCCATAAAGTACATTTT
TGAAAAGCCGTCTCTCTCGGGTCGAATTGCAAGGTGGCAGGTCCTCTTGTCCGAATATGATATTGTTTATGTTACTCGAAAGGCTATTAAGGGGAGTGCTTTGGCCGACT
ACCTAGCTCAACAACCTATAAATGACTACATACCGGTAAAGTTCGATTTTCCAGATGAGTATATCTCCACCATAACTGCAAGTGAGGAAAGTTTAGACCCGCAAACTTGG
ACCATGATGTTTGATGGTGCCTCTAACGAGTTAGGTCATGGGATTGGGGGTATTTTGATATCACCCAAAGGGGAACTATACCCTCTTACCGCTAGATTATGTTTTGACTG
CACACATAATATGGCCGAGTATGAAGCATGCTCGATGGGCGTCCAAGCTGCTGTTGATATGAAGGTTAAGAAACTTAAAGTTTTTGGGGATTCTATGCTAGTAATTCATC
AACTAAGAGGAGAATGGGAAACAAGAGACGTTAAGTTGTTGCCTTACAAACAACTCATAACAGAATTGTCACAAGAATTTGATGAAATCTCATTTGATTATTTGCCAAGA
GAAAATAATCAAGTAGCAGATGCATTGGCCACATTAGCGGTGATGTTCAATTTAGAACTCAATGAGGATGTCAGTCCGATTAAAGTTGGGAGGAGAGATGTCCCAGCTTC
TTGTATGAGCATTGAGGAAGAACCCGACGGTAACCCCTGGTTTCATAACATCAAGTAA
Protein sequenceShow/hide protein sequence
MSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFDITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYVEAAEEAFESS
FQSFEIANATTLHGKFGRPKSRLLEAAFKGNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTIPPLSHSFISAGTIHQEYDESSVVA
ALTEEREQVGPFVYPCPDATCEPIFKLLRKNNDGVWSEDCQAAFDKIKQYLQDPPILVPPTPGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSQ
VEKTCCALAWATRRLRQYMLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQPINDYIPVKFDFPDEYISTITASEESLDPQTW
TMMFDGASNELGHGIGGILISPKGELYPLTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLPYKQLITELSQEFDEISFDYLPR
ENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASCMSIEEEPDGNPWFHNIK