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Moc08g28030 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g28030
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr8:20208909..20213123
RNA-Seq ExpressionMoc08g28030
SyntenyMoc08g28030
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148559.1 uncharacterized protein LOC111017193 [Momordica charantia]5.9e-0867.86Show/hide
Query:  KAHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
        KAH+        +RHPKKNQSKTK  N GP+ND NKRI AIC VCGKSGHIAAN R
Subjt:  KAHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
XP_022150041.1 uncharacterized protein LOC111018314 [Momordica charantia]9.7e-1184.09Show/hide
Query:  QRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
        +RHPKKNQ KTKNVNLGP+ND NKRI AIC VCG SGHIAANCR
Subjt:  QRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
XP_022152118.1 uncharacterized protein LOC111019908 [Momordica charantia]4.2e-0662.5Show/hide
Query:  KAHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
        KAH    ++   + HPKK  SKTKNVNLG +ND NKRI  I  VCGKSGHIAAN R
Subjt:  KAHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
XP_022155402.1 uncharacterized protein LOC111022547 [Momordica charantia]6.9e-0969.09Show/hide
Query:  AHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
        AH+A       +RHPKKNQ KTKNVNLGP+N+ NKRI AI  VCGKS HIAANCR
Subjt:  AHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
TrEMBL top hitse value%identityAlignment
A0A6J1D4C8 uncharacterized protein LOC1110171932.8e-0867.86Show/hide
Query:  KAHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
        KAH+        +RHPKKNQSKTK  N GP+ND NKRI AIC VCGKSGHIAAN R
Subjt:  KAHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
A0A6J1DA93 uncharacterized protein LOC1110183144.7e-1184.09Show/hide
Query:  QRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
        +RHPKKNQ KTKNVNLGP+ND NKRI AIC VCG SGHIAANCR
Subjt:  QRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
A0A6J1DE03 uncharacterized protein LOC1110199082.0e-0662.5Show/hide
Query:  KAHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
        KAH    ++   + HPKK  SKTKNVNLG +ND NKRI  I  VCGKSGHIAAN R
Subjt:  KAHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
A0A6J1DP87 uncharacterized protein LOC1110225473.4e-0969.09Show/hide
Query:  AHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
        AH+A       +RHPKKNQ KTKNVNLGP+N+ NKRI AI  VCGKS HIAANCR
Subjt:  AHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACCCGGTTATGGTCCAACCAATAACCGGAAGTCCCTCTCGGGCAATGAGAGGGTGGGGCCCCTTGTTCATGTCCCGGAGTCAGCATTTAAAGGAACAC
TCATCTACTCCCCTAAAGTCGGGGAGGAGTGAATTCCATCTTGTGAAGTTATGTTCCCAACTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATATTGAGTCG
GCGACTCGGGCCACTCTCACCCATACAGATCAAAGGACGAGCCCTCACGGGCAGGAATCCATAACTCACTCAGGATTGAGAATGAGTTGCCTGGTCATCCTAAGA
AATAGCAATCTATTAGTTAACGGTGTTATACCTAAAGATTGCCTATTTCGCGGATGTGTTTGGCTTCAACTCATGCTAGATCTACTTGAGTTTAGAGTGTGGGTA
CTTAGGAATAAGGCTCACCTAGCAAGGGTTCTAAACCGTAACCAACAACGTCATCCCAAAAAGAATCAGTCCAAGACAAAGAATGTGAATCTTGGCCCAAAGAAT
GATGTTAACAAGCGCATCTGTGCAATTTGCCGAGTTTGTGGCAAGAGTGGCCATATAGCTGCAAACTGTAGACTGACTGGAATGTTTATGCTGAACGCACGCGCT
AAGCGTGGTCCTAAAACGATGGTGAATCACCCATTTCCAACTCCTTTGACTGACCAAATCGTGCTCAAACTGATAGTGGAACACTTCTTCTACACGTATGCATCG
GTTGGAACCGCCAAAACGCATTGGAAGACGCGTTTCATTAAGGGCAAAGTTGGAAGAAAACCTGTTTTTCTGCAGGCATCCCAGGCGCCTGGCGCCTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACCCGGTTATGGTCCAACCAATAACCGGAAGTCCCTCTCGGGCAATGAGAGGGTGGGGCCCCTTGTTCATGTCCCGGAGTCAGCATTTAAAGGAACAC
TCATCTACTCCCCTAAAGTCGGGGAGGAGTGAATTCCATCTTGTGAAGTTATGTTCCCAACTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATATTGAGTCG
GCGACTCGGGCCACTCTCACCCATACAGATCAAAGGACGAGCCCTCACGGGCAGGAATCCATAACTCACTCAGGATTGAGAATGAGTTGCCTGGTCATCCTAAGA
AATAGCAATCTATTAGTTAACGGTGTTATACCTAAAGATTGCCTATTTCGCGGATGTGTTTGGCTTCAACTCATGCTAGATCTACTTGAGTTTAGAGTGTGGGTA
CTTAGGAATAAGGCTCACCTAGCAAGGGTTCTAAACCGTAACCAACAACGTCATCCCAAAAAGAATCAGTCCAAGACAAAGAATGTGAATCTTGGCCCAAAGAAT
GATGTTAACAAGCGCATCTGTGCAATTTGCCGAGTTTGTGGCAAGAGTGGCCATATAGCTGCAAACTGTAGACTGACTGGAATGTTTATGCTGAACGCACGCGCT
AAGCGTGGTCCTAAAACGATGGTGAATCACCCATTTCCAACTCCTTTGACTGACCAAATCGTGCTCAAACTGATAGTGGAACACTTCTTCTACACGTATGCATCG
GTTGGAACCGCCAAAACGCATTGGAAGACGCGTTTCATTAAGGGCAAAGTTGGAAGAAAACCTGTTTTTCTGCAGGCATCCCAGGCGCCTGGCGCCTCCTGA
Protein sequenceShow/hide protein sequence
MNNPVMVQPITGSPSRAMRGWGPLFMSRSQHLKEHSSTPLKSGRSEFHLVKLCSQLPTRSRPQNGRNIESATRATLTHTDQRTSPHGQESITHSGLRMSCLVILR
NSNLLVNGVIPKDCLFRGCVWLQLMLDLLEFRVWVLRNKAHLARVLNRNQQRHPKKNQSKTKNVNLGPKNDVNKRICAICRVCGKSGHIAANCRLTGMFMLNARA
KRGPKTMVNHPFPTPLTDQIVLKLIVEHFFYTYASVGTAKTHWKTRFIKGKVGRKPVFLQASQAPGAS