; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g28110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g28110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionexopolygalacturonase-like
Genome locationchr8:20272157..20273242
RNA-Seq ExpressionMoc08g28110
SyntenyMoc08g28110
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039364.1 exopolygalacturonase-like [Cucumis melo var. makuwa]4.0e-11278.04Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        M+L+FSFI N+IVSDITSKDSKNFH+Q+LGCNNLTFQHVNVNAP  SINTDGIHIGRS GINIL+TNIGTGDDCISLGDGSKQVTITN+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY  EEPVEG++  NCT+  T+NG+RIKTWPASP A G ASDMH+ED++M NV NPILIDQEYCPYNQCNK+ PSKVKISKVSFKN+RG+S NA A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP
         LVCS+  PC+ VE+ +IDLTY+G+EGPI+S+C NVKP +SGKQNP AC+SPA P
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP

XP_008459709.2 PREDICTED: exopolygalacturonase-like [Cucumis melo]4.0e-11278.04Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        M+L+FSFI N+IVSDITSKDSKNFH+Q+LGCNNLTFQHVNVNAP  SINTDGIHIGRS GINIL+TNIGTGDDCISLGDGSKQVTITN+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY  EEPVEG++  NCT+  T+NG+RIKTWPASP A G ASDMH+ED++M NV NPILIDQEYCPYNQCNK+ PSKVKISKVSFKN+RG+S NA A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP
         LVCS+  PC+ VE+ +IDLTY+G+EGPI+S+C NVKP +SGKQNP AC+SPA P
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP

XP_022150984.1 exopolygalacturonase-like [Momordica charantia]1.0e-11581.25Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        MSL+FSFITNSIVS+ITSKDSKNFHV +LGCNNLTF+HV ++APG SINTDGIHIGRS  +N+LST IGTGDDCISLGDGSK VTI N+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRYT EEPVEGI   NCT  NT NGVRIKTWPASPT  GTA++MH+ED+IMVNVSNPILIDQEYCPYNQCNKK PSKVKISKVSFKN+RGSSANALA+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA
        K++CS++ PCE VE+ +IDLTYNG+EGPI+SQC NVKPIISGKQNP ACSS AP A
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA

XP_022157387.1 exopolygalacturonase-like [Momordica charantia]3.3e-13898.05Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITN+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTA GTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALA+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA
        KLVCSAEVPCEDVEV +IDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA

XP_038889253.1 exopolygalacturonase-like [Benincasa hispida]7.1e-10975.78Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        ++LRF+FITNSIVSDITSKDSK+FHV +LGC NLTFQHVN+NAPG S NTDGIHI RS GIN+ +TNI TGDDCISLGDGS+QVTITN+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLG+Y AE PV+G+ A NCT++NT+NGVRIKTWP+SP + GTASDMHFED+IMVNVSNPI+IDQ+YCP+NQC+K +PSKVKIS VSFKN+RG++ANALA+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA
          VCS++ PCED+EV +I+LTYNG+ GPISSQCKNVKPI SG Q+P ACSSP+  A
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA

TrEMBL top hitse value%identityAlignment
A0A1S3CC08 exopolygalacturonase-like1.9e-11278.04Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        M+L+FSFI N+IVSDITSKDSKNFH+Q+LGCNNLTFQHVNVNAP  SINTDGIHIGRS GINIL+TNIGTGDDCISLGDGSKQVTITN+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY  EEPVEG++  NCT+  T+NG+RIKTWPASP A G ASDMH+ED++M NV NPILIDQEYCPYNQCNK+ PSKVKISKVSFKN+RG+S NA A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP
         LVCS+  PC+ VE+ +IDLTY+G+EGPI+S+C NVKP +SGKQNP AC+SPA P
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP

A0A5A7T7B3 Exopolygalacturonase-like1.9e-11278.04Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        M+L+FSFI N+IVSDITSKDSKNFH+Q+LGCNNLTFQHVNVNAP  SINTDGIHIGRS GINIL+TNIGTGDDCISLGDGSKQVTITN+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY  EEPVEG++  NCT+  T+NG+RIKTWPASP A G ASDMH+ED++M NV NPILIDQEYCPYNQCNK+ PSKVKISKVSFKN+RG+S NA A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP
         LVCS+  PC+ VE+ +IDLTY+G+EGPI+S+C NVKP +SGKQNP AC+SPA P
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP

A0A6J1DBN7 exopolygalacturonase-like4.9e-11681.25Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        MSL+FSFITNSIVS+ITSKDSKNFHV +LGCNNLTF+HV ++APG SINTDGIHIGRS  +N+LST IGTGDDCISLGDGSK VTI N+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRYT EEPVEGI   NCT  NT NGVRIKTWPASPT  GTA++MH+ED+IMVNVSNPILIDQEYCPYNQCNKK PSKVKISKVSFKN+RGSSANALA+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA
        K++CS++ PCE VE+ +IDLTYNG+EGPI+SQC NVKPIISGKQNP ACSS AP A
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA

A0A6J1DUC6 exopolygalacturonase-like1.6e-13898.05Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITN+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTA GTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALA+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA
        KLVCSAEVPCEDVEV +IDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA

A0A6J1HYN0 exopolygalacturonase-like2.4e-10273.02Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        +SLRF+FITNSIV  ITS DSKNFH+ +LGCNNLTF +VN+ AP +S NTDGIHIGRS  I I  + I TGDDCISLGDGSKQ+ ITN+TCGPGHGIS+G
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRYT EEPVEG+   NCTI+NT+NGVRIKTWPAS  A+GTA++M F D+IMVNVSNPILIDQEYCP+NQCN+K PSK+KISKVSFKN+RGS A  +A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSP
        KL+CS  +PC++V+V +IDLTYNG  GPI+SQC NV+PIISGKQNP+ CSSP
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSP

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)1.0e-8661.33Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        M+LR   +TNSI+ D+T+ DSKNFHV ++GC NLTF+   ++A   SINTDGIHIGRS G+NI++T I TGDDCISLGDGSK + ITN+TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY  EE V GI   NCTI  + NGVRIKTWP S    G AS+MHF+D+ M +V  PILIDQ YCPYNQC  + PS VK+SK+SFKN++G+S    A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA
        KLVCS   PC  VE+ +IDLTY+G  GP +S C+N+KP I GKQ P  CS  A  A
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA

Q05967 Polygalacturonase3.8e-8157.54Show/hide
Query:  SLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVGS
        +L F+ +TNS + DIT+ DSK+FHV +  C NLTF   NV+AP +S NTDGIH+ RS+ +NI  +N  TGDDCIS+GD ++Q+ IT +TCGPGHGISVGS
Subjt:  SLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVGS

Query:  LGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALALK
        LG    E+PV G+   NCT  NT NGVRIKTWPAS    G  +D+HFED+I+ NVSNP++IDQ YCP+N+CNK  PS+VKISKVSF+N++G+S    A+ 
Subjt:  LGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALALK

Query:  LVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPA
        L+ S  VPCE +EV +ID+TY+G EGP  S C+N+KP + GKQNP  C++ A
Subjt:  LVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPA

Q39766 Polygalacturonase5.7e-8557.09Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        +++RF F+TN+++ DITSKDSK FH+ +  C N+T + + + AP +S NTDGIH+G+S G+NI++++I TGDDCIS+GDG+K + I  +TCGPGHGIS+G
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLG++  EEPVEGI+ +NCTI NTSNG RIKTWP      G  S++HFED+ M NVS+PILIDQ+YCP+N+C K   SKVK+S +SFKN+RG+SA   A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAP
        K +CS   PC++VE+ +ID+ +NG E P +SQC NVKPI  GK NP  CS P P
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAP

Q39786 Polygalacturonase1.5e-8557.48Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        +++RF F+TN+++ DITSKDSK FH+ +  C N+T + + + AP +S NTDGIH+G+S G+NI++++I TGDDCIS+GDG+K + I  +TCGPGHGIS+G
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLG++  EEPVEGI+ +NCTI NTSNG RIKTWP      G  S++HFED+ M NVS+PILIDQ+YCP+N+C K   SKVK+S +SFKN+RG+SA   A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAP
        K +CS   PC++VE+ +ID+ +NG E P +SQC NVKPI SGK NP  CS P P
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAP

Q40312 Polygalacturonase3.0e-8658.2Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        M+  F+F+ NSIV  +TSKDSKNFHV + GC N+TF    + APGDS NTDGIH+G+ST + IL+TNIGTGDDC+S+GDGSKQ+T+  + CGPGHG+SVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLG++T EE VEGI   NCT+  T NGVRIKTWP +P  T T SD+HFED+ M NV NP++IDQEY P+NQC+KK+PSK+K+SK+SFKNV+G+S  A  +
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA
         L+CS+ VPC+ VE+  +DL +NG   P +++C NVKP+++G      C +P  PA
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein9.0e-8657.71Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        +S+RF FI NS + DI+S D+KNFH+ +LG  N+T  ++ + AP DS NTDGIH+GRS G+ IL++ I TGDDCIS+GDG K + +  +TCGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY  E+ V GI+  NCT+  T NG+RIKTWP++  +T TASD+HFED+I+ +VSNPILIDQEYCP+NQCNK+  S +K+  +SFKN+RG+S N  A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPA
        KL+CS   PC++VE+ +ID+ YNG +GP +  C NV P I G Q+P+ACS+PA
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPA

AT3G07830.1 Pectin lyase-like superfamily protein1.2e-8253.97Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        +S+RF F+TN+ + DI+S D+KNFH+ ++G  N+TF +V + AP +S NTDGIH+GRS G++I+++ I TGDDC+S+GDG   + + N+ CGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY  E+ V GIR  NCT+  T NG+RIKTWP++  +T TAS++HFE++I+ NVSNPILIDQEYCP+NQCNK+  S +K++ +SF+ +RG+S N  A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSP
        KL+CS   PCE+V+V +I++ Y G +GP +  C NV+P + G Q P+AC++P
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSP

AT3G07840.1 Pectin lyase-like superfamily protein1.9e-8356.86Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        +S+RF F+ N+ + DI+S D+KNFH+ +LG  N+TF +V V AP +S NTDGIH+GRS G+ IL++ I TGDDCIS+GDG K + + N+ CGPGHGISVG
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY  E+ V GI   NCT+  T NG+RIKTWP++  AT TAS +HFE++I+ NVSNPILIDQEYCP+NQCNK+ PS +K+  +SFKN+RG+S N  A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP
        KL+CS   PC +VE+  I+L Y G +GP +  C NV P + G QNP+ACS+   P
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP

AT3G14040.1 Pectin lyase-like superfamily protein2.5e-8054.12Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        +++RF+ +TNS ++ ITS +SK FH+ IL C N+T   + ++AP +S+NTDGIHIGRS G+N++   I TGDDC+S+GDG++ + + N+ CGPGHGIS+G
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY  E+PV+G+    C I NT NGVRIKTWP SP   G AS++ FED+ M NVS P+LIDQEYCPY  C    PSKVK+S V+ KN++G+SA  +A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP
        KL+CS  VPC ++ + +I+L +NG EGP  S C N+KPI+SGK  P AC+  A P
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPP

AT5G48140.1 Pectin lyase-like superfamily protein1.1e-8355.25Show/hide
Query:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG
        +S+RF F+T++ +  ITS D+K+FH+ ++G  N+TF+ V + AP +S NTDGIH+GRS GI I+++ I TGDDC+S+GDG K + +  +TCGPGHGIS+G
Subjt:  MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVG

Query:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL
        SLGRY+ EE V GI+  NCT+  T NG+RIKTWP S   T TASD+HFE++++ NVSNPILIDQEYCP+NQCNK+ PS +K++ +SFK +RG+S N  A+
Subjt:  SLGRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALAL

Query:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPA--PP
        KL+CS   PC++VEV ++++ Y G +GP + QC NV P + G Q P+ACSSP   PP
Subjt:  KLVCSAEVPCEDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPA--PP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTGAGGTTTAGCTTCATCACAAATTCGATCGTGAGTGACATAACTTCTAAAGATAGCAAAAATTTTCATGTACAAATTTTGGGTTGTAACAACCTTACC
TTCCAACACGTGAATGTCAATGCGCCGGGAGATAGTATCAATACAGATGGAATTCATATTGGTCGTTCTACTGGGATTAATATCCTAAGTACAAACATCGGTACC
GGAGATGATTGTATCTCACTTGGAGATGGTAGTAAGCAAGTAACAATTACTAATATGACATGCGGTCCTGGACATGGTATAAGCGTAGGAAGTCTTGGAAGGTAC
ACTGCCGAAGAACCAGTTGAAGGAATCAGAGCTACAAATTGTACAATAATGAATACATCCAATGGTGTTAGAATCAAAACTTGGCCAGCTTCTCCTACTGCTACT
GGAACCGCTTCTGATATGCATTTCGAAGATATGATAATGGTTAATGTTAGCAATCCGATTCTTATAGACCAAGAATATTGTCCATACAACCAATGTAACAAAAAG
AGTCCATCAAAAGTGAAGATTAGCAAGGTTAGCTTCAAGAATGTCAGAGGTTCTTCAGCCAATGCACTTGCACTCAAACTTGTCTGTAGTGCCGAAGTTCCATGT
GAAGATGTAGAAGTTGTTGAAATTGATCTCACTTACAATGGAAACGAAGGCCCTATTTCATCTCAGTGTAAAAACGTGAAGCCCATCATTTCTGGAAAACAAAAC
CCTCGTGCTTGTTCTTCCCCTGCTCCACCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTGAGGTTTAGCTTCATCACAAATTCGATCGTGAGTGACATAACTTCTAAAGATAGCAAAAATTTTCATGTACAAATTTTGGGTTGTAACAACCTTACC
TTCCAACACGTGAATGTCAATGCGCCGGGAGATAGTATCAATACAGATGGAATTCATATTGGTCGTTCTACTGGGATTAATATCCTAAGTACAAACATCGGTACC
GGAGATGATTGTATCTCACTTGGAGATGGTAGTAAGCAAGTAACAATTACTAATATGACATGCGGTCCTGGACATGGTATAAGCGTAGGAAGTCTTGGAAGGTAC
ACTGCCGAAGAACCAGTTGAAGGAATCAGAGCTACAAATTGTACAATAATGAATACATCCAATGGTGTTAGAATCAAAACTTGGCCAGCTTCTCCTACTGCTACT
GGAACCGCTTCTGATATGCATTTCGAAGATATGATAATGGTTAATGTTAGCAATCCGATTCTTATAGACCAAGAATATTGTCCATACAACCAATGTAACAAAAAG
AGTCCATCAAAAGTGAAGATTAGCAAGGTTAGCTTCAAGAATGTCAGAGGTTCTTCAGCCAATGCACTTGCACTCAAACTTGTCTGTAGTGCCGAAGTTCCATGT
GAAGATGTAGAAGTTGTTGAAATTGATCTCACTTACAATGGAAACGAAGGCCCTATTTCATCTCAGTGTAAAAACGTGAAGCCCATCATTTCTGGAAAACAAAAC
CCTCGTGCTTGTTCTTCCCCTGCTCCACCAGCATAA
Protein sequenceShow/hide protein sequence
MSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNMTCGPGHGISVGSLGRY
TAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTATGTASDMHFEDMIMVNVSNPILIDQEYCPYNQCNKKSPSKVKISKVSFKNVRGSSANALALKLVCSAEVPC
EDVEVVEIDLTYNGNEGPISSQCKNVKPIISGKQNPRACSSPAPPA