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Moc08g28320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g28320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:20385642..20386124
RNA-Seq ExpressionMoc08g28320
SyntenyMoc08g28320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]1.1e-4873.2Show/hide
Query:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PA
        M +ME MY+EMV AAGA SRSENRV R D+ EQRG HLGP ++  PE  E E YT QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+N   P 
Subjt:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PA

Query:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        G+ITREEFDQL+ + DAQVEALKAKCE+K+ S +DGDLGESPFTSD+LEA IP
Subjt:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]2.2e-3190.7Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        +RGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITREEFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGESPFTSDVLEAPIP
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.4e-3055.56Show/hide
Query:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PA
        MR+ME MYN+MV  AGA SRS ++V   DV EQ   H  P +EE              GDLR+HLNRKR SS R  ++ +  H++SNQQAESS+N   P 
Subjt:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PA

Query:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        G+ITREEF+QL+ + DAQVEALK +CE+K+ + +DGDLGESPFTSD+LEA IP
Subjt:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]1.2e-3496.47Show/hide
Query:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        + KRGSSLRKGQSPSRSHRSSNQQAESSHNPAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGE PFTSDVLEAPIP
Subjt:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]4.4e-3257.52Show/hide
Query:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA---
        M +ME MYNEMV A GAGSRSE+R  R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP    
Subjt:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA---

Query:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        G+ITREEFDQL+ + DAQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP
Subjt:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198421.1e-3190.7Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        +RGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITREEFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGESPFTSDVLEAPIP
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

A0A6J1DDW5 uncharacterized protein LOC1110196345.5e-4973.2Show/hide
Query:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PA
        M +ME MY+EMV AAGA SRSENRV R D+ EQRG HLGP ++  PE  E E YT QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+N   P 
Subjt:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PA

Query:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        G+ITREEFDQL+ + DAQVEALKAKCE+K+ S +DGDLGESPFTSD+LEA IP
Subjt:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

A0A6J1DPN4 uncharacterized protein LOC1110230606.8e-3155.56Show/hide
Query:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PA
        MR+ME MYN+MV  AGA SRS ++V   DV EQ   H  P +EE              GDLR+HLNRKR SS R  ++ +  H++SNQQAESS+N   P 
Subjt:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN---PA

Query:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        G+ITREEF+QL+ + DAQVEALK +CE+K+ + +DGDLGESPFTSD+LEA IP
Subjt:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

A0A6J1DXR9 uncharacterized protein LOC1110251096.0e-3596.47Show/hide
Query:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        + KRGSSLRKGQSPSRSHRSSNQQAESSHNPAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGE PFTSDVLEAPIP
Subjt:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

A0A6J1DZJ1 uncharacterized protein LOC1110257382.1e-3257.52Show/hide
Query:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA---
        M +ME MYNEMV A GAGSRSE+R  R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP    
Subjt:  MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA---

Query:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP
        G+ITREEFDQL+ + DAQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP
Subjt:  GIITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTCCATGGAGGCAATGTATAACGAAATGGTGCTAGCTGCAGGCGCAGGGTCCCGATCTGAGAATCGAGTGACGCGCATGGACGTACGCGAGCAAAGGGGT
TCCCACCTCGGCCCAACCGAGGAAGAACGTCCCGAAGACAACGAGAGTGAGGGGTACACTCGCCAGAGGGGAGACCTCCGTGAGCATCTCAACAGAAAGAGAGGC
TCGTCTCTCCGAAAAGGGCAGTCACCATCCCGCTCCCACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAATCCCGCAGGGATAATCACAAGGGAGGAGTTC
GACCAGCTGAGGGGGGAGCTCGATGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGACGATTCACTGAACGATGGCGACTTGGGAGAATCGCCTTTC
ACCTCGGACGTTTTGGAAGCACCAATCCCTGAAGTTCAAAGCTCCTACCGTGAAGCCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTCCATGGAGGCAATGTATAACGAAATGGTGCTAGCTGCAGGCGCAGGGTCCCGATCTGAGAATCGAGTGACGCGCATGGACGTACGCGAGCAAAGGGGT
TCCCACCTCGGCCCAACCGAGGAAGAACGTCCCGAAGACAACGAGAGTGAGGGGTACACTCGCCAGAGGGGAGACCTCCGTGAGCATCTCAACAGAAAGAGAGGC
TCGTCTCTCCGAAAAGGGCAGTCACCATCCCGCTCCCACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAATCCCGCAGGGATAATCACAAGGGAGGAGTTC
GACCAGCTGAGGGGGGAGCTCGATGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGACGATTCACTGAACGATGGCGACTTGGGAGAATCGCCTTTC
ACCTCGGACGTTTTGGAAGCACCAATCCCTGAAGTTCAAAGCTCCTACCGTGAAGCCTTATGA
Protein sequenceShow/hide protein sequence
MRSMEAMYNEMVLAAGAGSRSENRVTRMDVREQRGSHLGPTEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGIITREEF
DQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPEVQSSYREAL