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Moc08g29460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g29460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr8:21155694..21156491
RNA-Seq ExpressionMoc08g29460
SyntenyMoc08g29460
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144472.1 LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like [Momordica charantia]1.0e-1785.48Show/hide
Query:  ILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGEL
        ILTKKP+VF D EQERTT KI  ILVALNEARGEDPLEDDGN+GA QGQLNVD EDEDLGEL
Subjt:  ILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGEL

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]5.6e-2483.54Show/hide
Query:  QLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSSS
        QLNVDREDED GEL QEVHGDEFE+EE+NDDISQYEV+VRTP+HESQQ D+EPP + QEGTSGPV VPSE MEESSSSS
Subjt:  QLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSSS

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]5.4e-1941.57Show/hide
Query:  QVSGDSEHDMEPFEHSDPATIEIQCQIAPGAILDETPPATLQGILSPSFLGHILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQG
        +VSGDSEHDMEP EHSD AT++I+CQIAP  I+ ETPPATLQ                                 +LVALNEARGEDPL+DDGNSG    
Subjt:  QVSGDSEHDMEPFEHSDPATIEIQCQIAPGAILDETPPATLQGILSPSFLGHILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQG

Query:  QLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSS
                                                       QDD+EP  Q QEGTSGP+ V SE MEESSSS
Subjt:  QLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSS

XP_022158483.1 uncharacterized protein LOC111024964 [Momordica charantia]8.6e-3341.06Show/hide
Query:  SKNNEIRDKENERVYVKIEELSIKWQKFMENSEKVNDEIQLELNSMRIRRRMNVSQDNLVSEYLELSIPSPLSTTVAMHVEGKEQVSGDSEHDMEPFEHS
        +K  EI DK+NE +  KI EL+ KWQ+FMENS ++++EIQ+ELN                                                        
Subjt:  SKNNEIRDKENERVYVKIEELSIKWQKFMENSEKVNDEIQLELNSMRIRRRMNVSQDNLVSEYLELSIPSPLSTTVAMHVEGKEQVSGDSEHDMEPFEHS

Query:  DPATIEIQCQIAPGAILDETPPATLQGILSPSFLGHILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGELSQ
                                                        EQERTT KI  ILVALNEA GEDPLEDDGNS   QG+LNVD EDEDLG+L Q
Subjt:  DPATIEIQCQIAPGAILDETPPATLQGILSPSFLGHILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGELSQ

Query:  EVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSSS
        EVHGDE EEEEENDDISQYEVR+   +HESQ+D  E P++V EG S PV VP+E   +SSSSS
Subjt:  EVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSSS

TrEMBL top hitse value%identityAlignment
A0A6J1CL76 uncharacterized protein LOC1110121885.3e-0443.9Show/hide
Query:  KPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQ
        K +   D E E    KIA     LNE            S  +Q +L+ +  DEDLG+L QEV  +E EEEEEN+DISQY             D++E PVQ
Subjt:  KPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQ

Query:  VQEGTSGPVGVPSEVMEESSSSS
        VQEG S P  VP+E  +ESSSSS
Subjt:  VQEGTSGPVGVPSEVMEESSSSS

A0A6J1CL76 uncharacterized protein LOC1110121889.0e-0456.52Show/hide
Query:  SKNNEIRDKENERVYVKIEELSIKWQKFMENSEKVNDEIQLELNSM
        +K  EIRDKENE +  KI EL+ KWQ+FMENS ++++EIQ+EL+ +
Subjt:  SKNNEIRDKENERVYVKIEELSIKWQKFMENSEKVNDEIQLELNSM

A0A6J1CTS8 LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like4.9e-1885.48Show/hide
Query:  ILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGEL
        ILTKKP+VF D EQERTT KI  ILVALNEARGEDPLEDDGN+GA QGQLNVD EDEDLGEL
Subjt:  ILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGEL

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220072.7e-2483.54Show/hide
Query:  QLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSSS
        QLNVDREDED GEL QEVHGDEFE+EE+NDDISQYEV+VRTP+HESQQ D+EPP + QEGTSGPV VPSE MEESSSSS
Subjt:  QLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSSS

A0A6J1DRR9 uncharacterized protein LOC1110237612.6e-1941.57Show/hide
Query:  QVSGDSEHDMEPFEHSDPATIEIQCQIAPGAILDETPPATLQGILSPSFLGHILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQG
        +VSGDSEHDMEP EHSD AT++I+CQIAP  I+ ETPPATLQ                                 +LVALNEARGEDPL+DDGNSG    
Subjt:  QVSGDSEHDMEPFEHSDPATIEIQCQIAPGAILDETPPATLQGILSPSFLGHILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQG

Query:  QLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSS
                                                       QDD+EP  Q QEGTSGP+ V SE MEESSSS
Subjt:  QLNVDREDEDLGELSQEVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSS

A0A6J1DW79 uncharacterized protein LOC1110249644.1e-3341.06Show/hide
Query:  SKNNEIRDKENERVYVKIEELSIKWQKFMENSEKVNDEIQLELNSMRIRRRMNVSQDNLVSEYLELSIPSPLSTTVAMHVEGKEQVSGDSEHDMEPFEHS
        +K  EI DK+NE +  KI EL+ KWQ+FMENS ++++EIQ+ELN                                                        
Subjt:  SKNNEIRDKENERVYVKIEELSIKWQKFMENSEKVNDEIQLELNSMRIRRRMNVSQDNLVSEYLELSIPSPLSTTVAMHVEGKEQVSGDSEHDMEPFEHS

Query:  DPATIEIQCQIAPGAILDETPPATLQGILSPSFLGHILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGELSQ
                                                        EQERTT KI  ILVALNEA GEDPLEDDGNS   QG+LNVD EDEDLG+L Q
Subjt:  DPATIEIQCQIAPGAILDETPPATLQGILSPSFLGHILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGELSQ

Query:  EVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSSS
        EVHGDE EEEEENDDISQYEVR+   +HESQ+D  E P++V EG S PV VP+E   +SSSSS
Subjt:  EVHGDEFEEEEENDDISQYEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGTAAAAATAACGAAATTAGGGATAAAGAGAATGAGAGAGTTTATGTGAAAATTGAGGAATTAAGCATAAAATGGCAAAAATTCATGGAAAACTCAGAGAAAGT
GAATGATGAGATTCAACTTGAGTTAAATAGCATGAGGATACGTCGTAGGATGAATGTGTCTCAAGATAACCTTGTTTCCGAGTATTTAGAACTGTCTATCCCTTCTCCTC
TTTCCACTACGGTTGCTATGCATGTTGAAGGTAAAGAACAGGTTAGTGGGGACTCTGAACACGACATGGAGCCCTTTGAGCATTCAGATCCGGCCACGATTGAAATTCAG
TGCCAAATTGCGCCTGGCGCAATTTTGGATGAGACTCCACCAGCCACTCTACAAGGTATTTTGTCTCCATCTTTTCTAGGTCATATCTTGACTAAAAAGCCCCTAGTTTT
TTATGATTCAGAACAGGAAAGGACAACGCAGAAAATTGCCGGAATTTTGGTGGCGTTGAATGAAGCAAGGGGAGAAGATCCATTAGAGGATGATGGAAACAGTGGGGCAG
TGCAAGGACAATTGAATGTTGATAGAGAGGATGAAGATCTTGGAGAATTATCCCAAGAAGTGCATGGAGATGAGTTTGAAGAGGAAGAAGAAAATGACGATATATCTCAA
TATGAAGTGAGAGTACGAACTCCAATGCACGAATCTCAGCAAGATGATAAAGAGCCCCCTGTACAAGTGCAAGAAGGAACATCCGGTCCTGTGGGTGTCCCTAGTGAGGT
CATGGAGGAATCATCTTCCTCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGTAAAAATAACGAAATTAGGGATAAAGAGAATGAGAGAGTTTATGTGAAAATTGAGGAATTAAGCATAAAATGGCAAAAATTCATGGAAAACTCAGAGAAAGT
GAATGATGAGATTCAACTTGAGTTAAATAGCATGAGGATACGTCGTAGGATGAATGTGTCTCAAGATAACCTTGTTTCCGAGTATTTAGAACTGTCTATCCCTTCTCCTC
TTTCCACTACGGTTGCTATGCATGTTGAAGGTAAAGAACAGGTTAGTGGGGACTCTGAACACGACATGGAGCCCTTTGAGCATTCAGATCCGGCCACGATTGAAATTCAG
TGCCAAATTGCGCCTGGCGCAATTTTGGATGAGACTCCACCAGCCACTCTACAAGGTATTTTGTCTCCATCTTTTCTAGGTCATATCTTGACTAAAAAGCCCCTAGTTTT
TTATGATTCAGAACAGGAAAGGACAACGCAGAAAATTGCCGGAATTTTGGTGGCGTTGAATGAAGCAAGGGGAGAAGATCCATTAGAGGATGATGGAAACAGTGGGGCAG
TGCAAGGACAATTGAATGTTGATAGAGAGGATGAAGATCTTGGAGAATTATCCCAAGAAGTGCATGGAGATGAGTTTGAAGAGGAAGAAGAAAATGACGATATATCTCAA
TATGAAGTGAGAGTACGAACTCCAATGCACGAATCTCAGCAAGATGATAAAGAGCCCCCTGTACAAGTGCAAGAAGGAACATCCGGTCCTGTGGGTGTCCCTAGTGAGGT
CATGGAGGAATCATCTTCCTCTTCTTGA
Protein sequenceShow/hide protein sequence
MFSKNNEIRDKENERVYVKIEELSIKWQKFMENSEKVNDEIQLELNSMRIRRRMNVSQDNLVSEYLELSIPSPLSTTVAMHVEGKEQVSGDSEHDMEPFEHSDPATIEIQ
CQIAPGAILDETPPATLQGILSPSFLGHILTKKPLVFYDSEQERTTQKIAGILVALNEARGEDPLEDDGNSGAVQGQLNVDREDEDLGELSQEVHGDEFEEEEENDDISQ
YEVRVRTPMHESQQDDKEPPVQVQEGTSGPVGVPSEVMEESSSSS