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Moc08g29470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g29470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr8:21156641..21157535
RNA-Seq ExpressionMoc08g29470
SyntenyMoc08g29470
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]2.2e-2284.81Show/hide
Query:  AAACLAAQKEAEAGPSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEP
        A A LAAQKEAEAGPSKKAK A+VQR AEEPL+EANEEEP+STEQT SRVKRVRLEVRRP FT  DILLERGF EAQEP
Subjt:  AAACLAAQKEAEAGPSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEP

XP_022156786.1 uncharacterized protein LOC111023620 [Momordica charantia]1.7e-1468.29Show/hide
Query:  TRAA-ACLAAQKEAEAGPSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEP
        TRA  A LAAQKEAEAGP KKAKR K  R +EEPL E N+EE +S EQT S+ KRVR EV+R NFTA +IL+E+GF EAQEP
Subjt:  TRAA-ACLAAQKEAEAGPSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEP

TrEMBL top hitse value%identityAlignment
A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220071.1e-2284.81Show/hide
Query:  AAACLAAQKEAEAGPSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEP
        A A LAAQKEAEAGPSKKAK A+VQR AEEPL+EANEEEP+STEQT SRVKRVRLEVRRP FT  DILLERGF EAQEP
Subjt:  AAACLAAQKEAEAGPSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEP

A0A6J1DW11 uncharacterized protein LOC1110236208.1e-1568.29Show/hide
Query:  TRAA-ACLAAQKEAEAGPSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEP
        TRA  A LAAQKEAEAGP KKAKR K  R +EEPL E N+EE +S EQT S+ KRVR EV+R NFTA +IL+E+GF EAQEP
Subjt:  TRAA-ACLAAQKEAEAGPSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEP

A0A6J1DW79 uncharacterized protein LOC1110249646.4e-0439.36Show/hide
Query:  PSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEPAGVEADDANIVTPKKPVTSLRKVRGYSIV
        P++   ++      +   +E NEEEP STEQ  S+ KRV LE     F A    +     +A    G++A+D ++VTPKK  TS+R+VRGY IV
Subjt:  PSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEPAGVEADDANIVTPKKPVTSLRKVRGYSIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCGAGCCGCAGCATGTTTGGCTGCCCAAAAAGAGGCCGAGGCTGGTCCATCTAAAAAAGCCAAGAGGGCTAAGGTGCAAAGAGGGGCAGAAGAGCCACTT
AAGGAGGCCAATGAAGAAGAGCCCAATTCTACCGAACAAACACTATCAAGAGTAAAAAGGGTGAGATTGGAGGTGCGAAGGCCCAACTTCACAGCACATGATATC
CTCCTTGAGAGGGGCTTTGTTGAAGCGCAAGAGCCCGCGGGAGTGGAGGCCGATGATGCCAATATTGTGACGCCCAAGAAGCCGGTCACATCCCTAAGAAAAGTT
CGGGGGTATTCCATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCGAGCCGCAGCATGTTTGGCTGCCCAAAAAGAGGCCGAGGCTGGTCCATCTAAAAAAGCCAAGAGGGCTAAGGTGCAAAGAGGGGCAGAAGAGCCACTT
AAGGAGGCCAATGAAGAAGAGCCCAATTCTACCGAACAAACACTATCAAGAGTAAAAAGGGTGAGATTGGAGGTGCGAAGGCCCAACTTCACAGCACATGATATC
CTCCTTGAGAGGGGCTTTGTTGAAGCGCAAGAGCCCGCGGGAGTGGAGGCCGATGATGCCAATATTGTGACGCCCAAGAAGCCGGTCACATCCCTAAGAAAAGTT
CGGGGGTATTCCATTGTTTGA
Protein sequenceShow/hide protein sequence
MTRAAACLAAQKEAEAGPSKKAKRAKVQRGAEEPLKEANEEEPNSTEQTLSRVKRVRLEVRRPNFTAHDILLERGFVEAQEPAGVEADDANIVTPKKPVTSLRKV
RGYSIV