; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g29510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g29510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:21179955..21181023
RNA-Seq ExpressionMoc08g29510
SyntenyMoc08g29510
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151473.1 uncharacterized protein LOC111019405 [Momordica charantia]8.4e-15590.71Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYIT QERSL ALL QE EKGKERA YYLSRTLIGAELNYS IEKMCLSLFF VDKLRHYIQAFTVHL AKADPMKYILSRPIISGRLAKWAILLQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVYVPQKAMKGQ LAD LANH VPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGA RRN  G GVVFVSPEKHMLPYSFTLGELC NNA EYQ LIIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQIAIEIGITYIEI GDSKLIINQLLLEYDVKHEDLKPYFVYARRLLE F+GVTLEHVPR ENKKADALANLA    VS DETLHISLCQKWVTPPIESE
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
        HQEANAISV II
Subjt:  HQEANAISVCII

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.3e-13977.24Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYI AQERSL ALLAQE  KGKER+LYYLSRTLIGAE+NYSPIEKMCL+LFFA+DKLRHY+QAFTVHLVAKADP+KY+LSRPIISGRLAKWA+LLQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVY+PQKA+KGQALAD LA+H +PSDWKLC+DLPD+EVF+ EV EPWTMYFDGAARR+ AGAG+V +SPEKHMLPYSF L ELCSNN AEYQ LIIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQIA+EIG+++IE+YGDSKLIINQL L+YDVKHEDLKPYF YAR+L+E F+ V LEHVPR+ENK+ADALANLAT L + +D TL+I LCQ+W+ PP+  E
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
         QE N  +  +I
Subjt:  HQEANAISVCII

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]2.9e-13976.92Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYI AQERSL ALLAQE  KGKER+LYYLSRTLIGAE+NYSPIEKMCL+LFFA+DKLRHY+QAFTVHLVAKADP+KY+LSRPII+GRLAKWA+LLQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVY+PQKA+KGQALAD LA+H +PSDWKLC+DLPD+EVF+ EV EPWTMYFDGAARR+ AGAG+V +SPEKHMLPYSF L ELCSNN AEYQ LIIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQIA+EIG+++IE+YGDSKLIINQL L+YDVKHEDLKPYF YAR+L+E F+ V LEHVPR+ENK+ADALANLAT L + +D TL+I LCQ+W+ PP+  E
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
         QE N  +  +I
Subjt:  HQEANAISVCII

XP_031742390.1 uncharacterized protein LOC116401672 [Cucumis sativus]2.9e-13976.92Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYI AQERSL ALLAQE  KGKER+LYYLSRTLIGAE+NYSPIEKMCL+LFFA+DKLRHY+QAFTVHLVAKADP+KY+LSRPII+GRLAKWA+LLQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVY+PQKA+KGQALAD LA+H +PSDWKLC+DLPD+EVF+ EV EPWTMYFDGAARR+ AGAG+V +SPEKHMLPYSF L ELCSNN AEYQ LIIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQIA+EIG+++IE+YGDSKLIINQL L+YDVKHEDLKPYF YAR+L+E F+ V LEHVPR+ENK+ADALANLAT L + +D TL+I LCQ+W+ PP+  E
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
         QE N  +  +I
Subjt:  HQEANAISVCII

XP_031742888.1 uncharacterized protein LOC116404510 [Cucumis sativus]1.3e-13977.24Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYI AQERSL ALLAQE  KGKER+LYYLSRTLIGAE+NYSPIEKMCL+LFFA+DKLRHY+QAFTVHLVAKADP+KY+LSRPIISGRLAKWA+LLQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVY+PQKA+KGQALAD LA+H +PSDWKLC+DLPD+EVF+ EV EPWTMYFDGAARR+ AGAG+V +SPEKHMLPYSF L ELCSNN AEYQ LIIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQIA+EIG+++IE+YGDSKLIINQL L+YDVKHEDLKPYF YAR+L+E F+ V LEHVPR+ENK+ADALANLAT L + +D TL+I LCQ+W+ PP+  E
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
         QE N  +  +I
Subjt:  HQEANAISVCII

TrEMBL top hitse value%identityAlignment
A0A5A7SKZ3 Ribonuclease H1.9e-13676.6Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYI AQE SL ALLAQE +KGKE ALYYLSRTL GAELNYSPIEKMCL+LFFA+DKLRHY+QAFT+HLVAKADP+KYILSRP+ISGRLAKWAI+LQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVY+PQKA+KGQALAD LA+H VPS+WKLC+DLPDEEV +VE  EPW M+FDGAARR+ AG G+VF+SPEKHMLPYSFTLGELCSNN AEYQ  IIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQ+A E GI  IEI+GDSKLIINQL  +Y+VKH+DLKPYF YARRL++ F+ + LEH+PR ENKKADALANLAT L VSED  ++ISLCQKW+ P IES+
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
        ++EA+ ISV  I
Subjt:  HQEANAISVCII

A0A5A7TZU9 Ribonuclease H1.9e-13676.6Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYI AQE SL ALLAQE +KGKE ALYYLSRTL GAELNYSPIEKMCL+LFFA+DKLRHY+QAFT+HLVAKADP+KYILSRP+ISGRLAKWAI+LQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVY+PQKA+KGQALAD LA+H VPS+WKLC+DLPDEEV +VE  EPW M+FDGAARR+ AG G+VF+SPEKHMLPYSFTLGELCSNN AEYQ  IIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQ+A E GI  IEI+GDSKLIINQL  +Y+VKH+DLKPYF YARRL++ F+ + LEH+PR ENKKADALANLAT L VSED  ++ISLCQKW+ P IES+
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
        ++EA+ ISV  I
Subjt:  HQEANAISVCII

A0A5D3BTY1 Ribonuclease H1.9e-13676.6Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYI AQE SL ALLAQE +KGKE ALYYLSRTL GAELNYSPIEKMCL+LFFA+DKLRHY+QAFT+HLVAKADP+KYILSRP+ISGRLAKWAI+LQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVY+PQKA+KGQALAD LA+H VPS+WKLC+DLPDEEV +VE  EPW M+FDGAARR+ AG G+VF+SPEKHMLPYSFTLGELCSNN AEYQ  IIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQ+A E GI  IEI+GDSKLIINQL  +Y+VKH+DLKPYF YARRL++ F+ + LEH+PR ENKKADALANLAT L VSED  ++ISLCQKW+ P IES+
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
        ++EA+ ISV  I
Subjt:  HQEANAISVCII

A0A5D3D1E5 Ribonuclease H1.9e-13676.6Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYI AQE SL ALLAQE +KGKE ALYYLSRTL GAELNYSPIEKMCL+LFFA+DKLRHY+QAFT+HLVAKADP+KYILSRP+ISGRLAKWAI+LQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVY+PQKA+KGQALAD LA+H VPS+WKLC+DLPDEEV +VE  EPW M+FDGAARR+ AG G+VF+SPEKHMLPYSFTLGELCSNN AEYQ  IIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQ+A E GI  IEI+GDSKLIINQL  +Y+VKH+DLKPYF YARRL++ F+ + LEH+PR ENKKADALANLAT L VSED  ++ISLCQKW+ P IES+
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
        ++EA+ ISV  I
Subjt:  HQEANAISVCII

A0A6J1DC95 Ribonuclease H4.1e-15590.71Show/hide
Query:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ
        K LILYIT QERSL ALL QE EKGKERA YYLSRTLIGAELNYS IEKMCLSLFF VDKLRHYIQAFTVHL AKADPMKYILSRPIISGRLAKWAILLQ
Subjt:  KSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGRLAKWAILLQ

Query:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG
        QYDIVYVPQKAMKGQ LAD LANH VPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGA RRN  G GVVFVSPEKHMLPYSFTLGELC NNA EYQ LIIG
Subjt:  QYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIG

Query:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE
        LQIAIEIGITYIEI GDSKLIINQLLLEYDVKHEDLKPYFVYARRLLE F+GVTLEHVPR ENKKADALANLA    VS DETLHISLCQKWVTPPIESE
Subjt:  LQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESE

Query:  HQEANAISVCII
        HQEANAISV II
Subjt:  HQEANAISVCII

SwissProt top hitse value%identityAlignment
F9VN79 Ribonuclease HI7.2e-0834.33Show/hide
Query:  YFDGAARRNEAGA----GVVFVSPEKHMLPYS-----FTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYA
        YFDG       G     G V     + +  Y      F++    +NN AEY  LI  ++  + +GI+   I GDS+L+I Q+  EY VK + + P +  A
Subjt:  YFDGAARRNEAGA----GVVFVSPEKHMLPYS-----FTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYA

Query:  RRLLETFNGVTLEHVPRLENKKADALANLATVLM
          L +  N  TL  VPR ENK+AD L+ +A  L+
Subjt:  RRLLETFNGVTLEHVPRLENKKADALANLATVLM

P64956 Uncharacterized protein Mb2253c7.5e-1338.33Show/hide
Query:  DGAARRNEAGAG---VVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFN
        DG +R N   AG   VV+ +    +L  S       +NN AEY+ LI GL  A+++G T   +  DSKL++ Q+   + VKH DL   +V A+ L   F 
Subjt:  DGAARRNEAGAG---VVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFN

Query:  GVTLEHVPRLENKKADALAN
         +  E VPR  N  AD LAN
Subjt:  GVTLEHVPRLENKKADALAN

P9WLH4 Uncharacterized protein MT22877.5e-1338.33Show/hide
Query:  DGAARRNEAGAG---VVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFN
        DG +R N   AG   VV+ +    +L  S       +NN AEY+ LI GL  A+++G T   +  DSKL++ Q+   + VKH DL   +V A+ L   F 
Subjt:  DGAARRNEAGAG---VVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFN

Query:  GVTLEHVPRLENKKADALAN
         +  E VPR  N  AD LAN
Subjt:  GVTLEHVPRLENKKADALAN

P9WLH5 Bifunctional protein Rv2228c7.5e-1338.33Show/hide
Query:  DGAARRNEAGAG---VVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFN
        DG +R N   AG   VV+ +    +L  S       +NN AEY+ LI GL  A+++G T   +  DSKL++ Q+   + VKH DL   +V A+ L   F 
Subjt:  DGAARRNEAGAG---VVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFN

Query:  GVTLEHVPRLENKKADALAN
         +  E VPR  N  AD LAN
Subjt:  GVTLEHVPRLENKKADALAN

Q9HSF6 Ribonuclease HI1.8e-1441.46Show/hide
Query:  YFDGAARRN--EAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETF
        YFDGA+R N   A  G V VS +  ++          +NN AEY  LI  L+ A + G   IE+ GDS+L+  QL   +D    DL+   V AR LL  F
Subjt:  YFDGAARRN--EAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETF

Query:  NGVTLEHVPRLENKKADALANLA
        +  ++ HVPR  N++ADALAN A
Subjt:  NGVTLEHVPRLENKKADALANLA

Arabidopsis top hitse value%identityAlignment
AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-1230.15Show/hide
Query:  TMYFDGAARRN--EAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLE
        T+ FDGA++ N  +AGAG V  + +  +L Y        +NN AEY+ L++GL+ A++ G   + + GDS L+  Q+   +   H  +      A+ L+ 
Subjt:  TMYFDGAARRN--EAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLE

Query:  TFNGVTLEHVPRLENKKADALANLATVLMVSEDETL
        +F    ++H+ R +N +AD  AN A  L   + + +
Subjt:  TFNGVTLEHVPRLENKKADALANLATVLMVSEDETL

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-1230.15Show/hide
Query:  TMYFDGAARRN--EAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLE
        T+ FDGA++ N  +AGAG V  + +  +L Y        +NN AEY+ L++GL+ A++ G   + + GDS L+  Q+   +   H  +      A+ L+ 
Subjt:  TMYFDGAARRN--EAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGLQIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLE

Query:  TFNGVTLEHVPRLENKKADALANLATVLMVSEDETL
        +F    ++H+ R +N +AD  AN A  L   + + +
Subjt:  TFNGVTLEHVPRLENKKADALANLATVLMVSEDETL

AT5G51080.1 RNase H family protein2.0e-1334.32Show/hide
Query:  ALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFV-SPEKHMLPYSFTLG-ELCSNNAAEYQTLIIGLQIAIEIGITYIE
        AL   L   ++PS     E L + E       E   + FDGA++ N   +G   V   E   L +    G  + +NNAAEY  LI+GL+ AIE G T I+
Subjt:  ALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFV-SPEKHMLPYSFTLG-ELCSNNAAEYQTLIIGLQIAIEIGITYIE

Query:  IYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDE
        +  DSKL+  Q+  ++ V HE L      A++L +      + HV R  N  AD  AN+A  L   E E
Subjt:  IYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDE

AT5G51080.2 RNase H family protein2.0e-1334.32Show/hide
Query:  ALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFV-SPEKHMLPYSFTLG-ELCSNNAAEYQTLIIGLQIAIEIGITYIE
        AL   L   ++PS     E L + E       E   + FDGA++ N   +G   V   E   L +    G  + +NNAAEY  LI+GL+ AIE G T I+
Subjt:  ALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFV-SPEKHMLPYSFTLG-ELCSNNAAEYQTLIIGLQIAIEIGITYIE

Query:  IYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDE
        +  DSKL+  Q+  ++ V HE L      A++L +      + HV R  N  AD  AN+A  L   E E
Subjt:  IYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDE

AT5G51080.3 RNase H family protein2.0e-1334.32Show/hide
Query:  ALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFV-SPEKHMLPYSFTLG-ELCSNNAAEYQTLIIGLQIAIEIGITYIE
        AL   L   ++PS     E L + E       E   + FDGA++ N   +G   V   E   L +    G  + +NNAAEY  LI+GL+ AIE G T I+
Subjt:  ALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFV-SPEKHMLPYSFTLG-ELCSNNAAEYQTLIIGLQIAIEIGITYIE

Query:  IYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDE
        +  DSKL+  Q+  ++ V HE L      A++L +      + HV R  N  AD  AN+A  L   E E
Subjt:  IYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACCTTTCCAGAGATTGATGAGGAAGGATACAAGTTTCTAGTGGGATCAAGAAAGTCGTTGATATTATATATCACGGCGCAAGAAAGATCGCTCGTAGCGTTGTT
GGCACAAGAAGGAGAAAAGGGGAAAGAACGAGCCCTTTATTACTTGAGTAGAACCTTAATCGGAGCTGAGTTAAACTACTCTCCAATTGAGAAGATGTGTCTTTCTCTCT
TCTTCGCTGTCGATAAATTAAGGCACTATATACAAGCCTTTACGGTGCATCTAGTTGCTAAGGCTGATCCAATGAAATATATCTTGTCGAGGCCGATCATTTCGGGACGT
TTGGCAAAATGGGCTATTTTGCTCCAACAGTACGATATTGTTTACGTACCGCAAAAGGCAATGAAAGGGCAAGCATTGGCAGACTTACTAGCGAATCATCGAGTCCCATC
AGATTGGAAATTGTGCGAGGATTTGCCTGATGAAGAAGTATTCTATGTTGAAGTAAAGGAACCTTGGACCATGTACTTTGATGGTGCAGCACGAAGAAATGAAGCGGGGG
CAGGTGTTGTCTTTGTCTCACCTGAGAAACATATGTTACCCTATAGCTTCACACTTGGTGAATTGTGTTCAAACAACGCTGCTGAATATCAAACGCTCATCATAGGACTT
CAAATTGCCATAGAAATCGGAATAACATACATTGAGATCTACGGCGATTCGAAGTTGATAATCAACCAACTTCTGCTGGAGTATGATGTGAAGCACGAAGACCTTAAGCC
TTACTTCGTTTATGCTAGACGACTACTGGAGACGTTTAATGGTGTAACACTAGAGCATGTTCCTCGTTTGGAGAACAAAAAGGCAGATGCCCTAGCAAATTTGGCTACTG
TTCTTATGGTTTCAGAAGATGAGACGTTGCACATTTCACTCTGCCAGAAATGGGTCACCCCACCAATCGAAAGTGAACATCAAGAAGCAAATGCTATATCAGTTTGCATT
ATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACCTTTCCAGAGATTGATGAGGAAGGATACAAGTTTCTAGTGGGATCAAGAAAGTCGTTGATATTATATATCACGGCGCAAGAAAGATCGCTCGTAGCGTTGTT
GGCACAAGAAGGAGAAAAGGGGAAAGAACGAGCCCTTTATTACTTGAGTAGAACCTTAATCGGAGCTGAGTTAAACTACTCTCCAATTGAGAAGATGTGTCTTTCTCTCT
TCTTCGCTGTCGATAAATTAAGGCACTATATACAAGCCTTTACGGTGCATCTAGTTGCTAAGGCTGATCCAATGAAATATATCTTGTCGAGGCCGATCATTTCGGGACGT
TTGGCAAAATGGGCTATTTTGCTCCAACAGTACGATATTGTTTACGTACCGCAAAAGGCAATGAAAGGGCAAGCATTGGCAGACTTACTAGCGAATCATCGAGTCCCATC
AGATTGGAAATTGTGCGAGGATTTGCCTGATGAAGAAGTATTCTATGTTGAAGTAAAGGAACCTTGGACCATGTACTTTGATGGTGCAGCACGAAGAAATGAAGCGGGGG
CAGGTGTTGTCTTTGTCTCACCTGAGAAACATATGTTACCCTATAGCTTCACACTTGGTGAATTGTGTTCAAACAACGCTGCTGAATATCAAACGCTCATCATAGGACTT
CAAATTGCCATAGAAATCGGAATAACATACATTGAGATCTACGGCGATTCGAAGTTGATAATCAACCAACTTCTGCTGGAGTATGATGTGAAGCACGAAGACCTTAAGCC
TTACTTCGTTTATGCTAGACGACTACTGGAGACGTTTAATGGTGTAACACTAGAGCATGTTCCTCGTTTGGAGAACAAAAAGGCAGATGCCCTAGCAAATTTGGCTACTG
TTCTTATGGTTTCAGAAGATGAGACGTTGCACATTTCACTCTGCCAGAAATGGGTCACCCCACCAATCGAAAGTGAACATCAAGAAGCAAATGCTATATCAGTTTGCATT
ATTTAA
Protein sequenceShow/hide protein sequence
MQTFPEIDEEGYKFLVGSRKSLILYITAQERSLVALLAQEGEKGKERALYYLSRTLIGAELNYSPIEKMCLSLFFAVDKLRHYIQAFTVHLVAKADPMKYILSRPIISGR
LAKWAILLQQYDIVYVPQKAMKGQALADLLANHRVPSDWKLCEDLPDEEVFYVEVKEPWTMYFDGAARRNEAGAGVVFVSPEKHMLPYSFTLGELCSNNAAEYQTLIIGL
QIAIEIGITYIEIYGDSKLIINQLLLEYDVKHEDLKPYFVYARRLLETFNGVTLEHVPRLENKKADALANLATVLMVSEDETLHISLCQKWVTPPIESEHQEANAISVCI
I