CuGenDBv2

Gene ID	Moc08g29880
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111019515
Genome location	chr8:21348753..21350235
RNA-Seq Expression	Moc08g29880
Synteny	Moc08g29880
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]

2.9e-102

74.3

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Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        MPE EDTENEVVRTDTQEPSPLDTP +G FCSHQALPTGATGSTPLAT+EY T MATLPGVRDAH IPSNAVNPL C TGR KVGENSTQE  REED ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSKRRAVQTKKPTVPVNEPKTRAAKAKAAKAKTKVVAPGPVDTIELDLSEGEEVETKWNAANLATQTSLMKSRKIMTELGFDLN
        TQT+REMFQYKR+E KSSKRRAVQ  KPTVP+NEPKTRAAKAKAA+AK KVVAPGPVD IELDLSEGE+VET WNAANLAT+TSLMK  KIMTELGFDL 
Subjt:  TQTLREMFQYKRQEKKSSKRRAVQTKKPTVPVNEPKTRAAKAKAAKAKTKVVAPGPVDTIELDLSEGEEVETKWNAANLATQTSLMKSRKIMTELGFDLN

Query:  LGDVPDDWRETARDKEWRPLIQPIQY---------------QLHL-------------------QLENIGDAVGNKMLVTQTLE
        LGDVPDDWR+TAR KEWRPLIQPIQ                Q H+                    ++NI DAVGNKMLVT TLE
Subjt:  LGDVPDDWRETARDKEWRPLIQPIQY---------------QLHL-------------------QLENIGDAVGNKMLVTQTLE

XP_022152366.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111020110 [Momordica charantia]

1.0e-46

86.55

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Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        MPE EDTENEVVRTDTQEPSPLDTPT+G FCSHQ LPTGATGS PLATDEYVT MATLPGVRDAH IPSN VNPL CDTGRS+VGENSTQEPT EED ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSK
         QT+REMFQYKR+EK SSK
Subjt:  TQTLREMFQYKRQEKKSSK

XP_022158357.1 uncharacterized protein LOC111024860 [Momordica charantia]

1.4e-48

88.24

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Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        MPE EDTENEVVRTDTQEPSPLDTPT+G FCSHQ LPTGATGSTPLATDEYVTPMATLPGVRDAH IPSN VNPL CDTGRSKVGENSTQEPT EED ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSK
        TQT+R+MFQYKR+EKK  K
Subjt:  TQTLREMFQYKRQEKKSSK

XP_022158852.1 uncharacterized protein LOC111025316 [Momordica charantia]

1.8e-51

91.06

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Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        MPE EDTENEVVRTDTQEPS LDTPT+G FCSHQ LPTGATGSTPLATDEYVTPMATLPGVRDAH IPSNAVNPL CDTGRSKVGENSTQEPT EED ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSKRRAV
        TQT+REMFQYKR+EKKSSKRRAV
Subjt:  TQTLREMFQYKRQEKKSSKRRAV

XP_022158884.1 uncharacterized protein LOC111025345 [Momordica charantia]

4.5e-55

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Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        M EMEDTENEVVR DTQEPSPLDTPTDG F SHQALPTGATGSTPLATDEY+TPMATLPGVRDAHAIPSNAVN L CDTGR KVGENSTQEPTR++D ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSKRRAVQTKKPTVPVNEPKTRAAKAKAAKAKTK
        TQTLREMFQYKR+EKKSSK RAVQTKKPTVP+N   TR      A   T+
Subjt:  TQTLREMFQYKRQEKKSSKRRAVQTKKPTVPVNEPKTRAAKAKAAKAKTK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515

8.3e-103

74.65

Show/hide

Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        MPE EDTENEVVRTDTQEPSPLDTP +G FCSHQALPTGATGSTPLATDEY T MATLPGVRDAH IPSNAVNPL C TGR KVGENSTQE  REED ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSKRRAVQTKKPTVPVNEPKTRAAKAKAAKAKTKVVAPGPVDTIELDLSEGEEVETKWNAANLATQTSLMKSRKIMTELGFDLN
        TQT+REMFQYKR+E KSSKRRAVQ  KPTVP+NEPKTRAAKAKAA+AK KVVAPGPVD IELDLSEGE+VET WNAANLAT+TSLMK  KIMTELGFDL 
Subjt:  TQTLREMFQYKRQEKKSSKRRAVQTKKPTVPVNEPKTRAAKAKAAKAKTKVVAPGPVDTIELDLSEGEEVETKWNAANLATQTSLMKSRKIMTELGFDLN

Query:  LGDVPDDWRETARDKEWRPLIQPIQY---------------QLHL-------------------QLENIGDAVGNKMLVTQTLE
        LGDVPDDWR+TAR KEWRPLIQPIQ                Q H+                    ++NI DAVGNKMLVT TLE
Subjt:  LGDVPDDWRETARDKEWRPLIQPIQY---------------QLHL-------------------QLENIGDAVGNKMLVTQTLE

A0A6J1DHH9 LOW QUALITY PROTEIN: uncharacterized protein LOC111020110

4.9e-47

86.55

Show/hide

Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        MPE EDTENEVVRTDTQEPSPLDTPT+G FCSHQ LPTGATGS PLATDEYVT MATLPGVRDAH IPSN VNPL CDTGRS+VGENSTQEPT EED ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSK
         QT+REMFQYKR+EK SSK
Subjt:  TQTLREMFQYKRQEKKSSK

A0A6J1DX11 uncharacterized protein LOC111024860

6.9e-49

88.24

Show/hide

Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        MPE EDTENEVVRTDTQEPSPLDTPT+G FCSHQ LPTGATGSTPLATDEYVTPMATLPGVRDAH IPSN VNPL CDTGRSKVGENSTQEPT EED ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSK
        TQT+R+MFQYKR+EKK  K
Subjt:  TQTLREMFQYKRQEKKSSK

A0A6J1DY94 uncharacterized protein LOC111025316

8.7e-52

91.06

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Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        MPE EDTENEVVRTDTQEPS LDTPT+G FCSHQ LPTGATGSTPLATDEYVTPMATLPGVRDAH IPSNAVNPL CDTGRSKVGENSTQEPT EED ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSKRRAV
        TQT+REMFQYKR+EKKSSKRRAV
Subjt:  TQTLREMFQYKRQEKKSSKRRAV

A0A6J1E0Q9 uncharacterized protein LOC111025345

2.2e-55

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Query:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED
        M EMEDTENEVVR DTQEPSPLDTPTDG F SHQALPTGATGSTPLATDEY+TPMATLPGVRDAHAIPSNAVN L CDTGR KVGENSTQEPTR++D ED
Subjt:  MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHED

Query:  TQTLREMFQYKRQEKKSSKRRAVQTKKPTVPVNEPKTRAAKAKAAKAKTK
        TQTLREMFQYKR+EKKSSK RAVQTKKPTVP+N   TR      A   T+
Subjt:  TQTLREMFQYKRQEKKSSKRRAVQTKKPTVPVNEPKTRAAKAKAAKAKTK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCCGGAAATGGAGGATACCGAAAACGAAGTGGTAAGAACAGATACTCAGGAACCTTCCCCATTGGATACACCTACAGACGGAACATTTTGTAGTCATCAAGCGTTGCC
TACTGGGGCAACTGGATCAACTCCGTTGGCAACGGATGAGTATGTCACACCGATGGCCACTCTACCAGGGGTAAGGGATGCTCACGCTATTCCTTCTAATGCCGTTAACC
CGCTTGAGTGTGATACAGGTAGATCCAAGGTTGGGGAGAATAGTACTCAAGAACCTACCAGAGAAGAAGATCATGAGGACACGCAGACGTTAAGGGAAATGTTCCAATAC
AAGAGGCAGGAGAAAAAGAGTTCAAAACGTCGTGCAGTTCAGACTAAGAAGCCGACAGTGCCTGTGAATGAACCTAAAACGAGAGCTGCGAAAGCTAAAGCAGCTAAAGC
TAAGACAAAGGTAGTGGCACCTGGGCCAGTTGATACAATCGAACTAGACTTGTCTGAGGGAGAGGAGGTCGAGACGAAATGGAACGCGGCGAATTTAGCCACTCAAACTT
CATTAATGAAATCCCGTAAGATTATGACAGAATTGGGATTCGACCTCAATCTAGGAGATGTACCTGACGATTGGAGGGAGACCGCTAGAGATAAAGAATGGAGACCACTT
ATTCAGCCAATACAATATCAACTACACCTTCAACTTGAGAATATCGGAGATGCTGTGGGAAATAAGATGTTAGTGACTCAAACTCTAGAACAGCTCGGTGAGGCTCTAGA
ATGTGTTGGGAAGCCCTCTGCCACTTGGGATTTGACTACTCATGGCAAGGTACGACTAAAACTCGAGGATGTTTCACTAGCTGCTGCAGGATGGTTATATATAGTCAAAA
ACAGAATTCTGCCAACGGAGCATGATGAGCATGTCACTCAGGATAGGGCACTGCTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACC
AGTACCATGAGTGTGCCCACCGAACACGTGCTCCCTGCGGATCAAATTAAGAGAGATGCCCCAGTTGTGGAAGAGAAGAATATTCGGAGAATTATCGCCCATGCGTTACA
AAGAAGGGAAGGTACTGGGACTCCTACATCGGAGATCCGTCGTCTCCGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATATACAACTTGA
GGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTGGCTGCTATCCTTGGTCATCCATCTTCCAGTATCGCCACTGATCCTAGTCCACAACCTCCAACT
TCATGA

mRNA sequence

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Protein sequence

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MPEMEDTENEVVRTDTQEPSPLDTPTDGTFCSHQALPTGATGSTPLATDEYVTPMATLPGVRDAHAIPSNAVNPLECDTGRSKVGENSTQEPTREEDHEDTQTLREMFQY
KRQEKKSSKRRAVQTKKPTVPVNEPKTRAAKAKAAKAKTKVVAPGPVDTIELDLSEGEEVETKWNAANLATQTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPL
IQPIQYQLHLQLENIGDAVGNKMLVTQTLEQLGEALECVGKPSATWDLTTHGKVRLKLEDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINT
STMSVPTEHVLPADQIKRDAPVVEEKNIRRIIAHALQRREGTGTPTSEIRRLREENQQLRDQVREVVQHIYNLRASLDFAVLPSWPPALAAILGHPSSSIATDPSPQPPT
S

Moc08g29880 (gene) of Bitter gourd (OHB3-1) v2 genome