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Moc08g30130 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g30130
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr8:21551513..21554179
RNA-Seq ExpressionMoc08g30130
SyntenyMoc08g30130
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026069.1 gag/pol protein [Cucumis melo var. makuwa]8.7e-2462.93Show/hide
Query:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS
        V  +NG VIDE SQVSFIL+SLP+SFLQF SN +MNK+ Y LT +LNEL  F+SLMK KG + +ANVAT  ++FHRGST GTKS+ SSSG+K ++KK   
Subjt:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS

Query:  GKGPKAD-PTATTTKK
        G+G KA+  TA TTKK
Subjt:  GKGPKAD-PTATTTKK

KAA0040448.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-2564.35Show/hide
Query:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS
        V  +NG VIDE SQVSFILKSLP+SFLQF SN +MNK+ Y LT LLNEL  F+SLMK KG + +ANVAT  ++FHRGST GTKSV SSSG+K ++KK   
Subjt:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS

Query:  GKGPKADPTATTTKK
        G+G KA+P A  T K
Subjt:  GKGPKADPTATTTKK

KAA0054432.1 gag/pol protein [Cucumis melo var. makuwa]8.7e-2462.93Show/hide
Query:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS
        V  +NG VIDE SQVSFIL+SLP+SFLQF +N +MNK+ Y LT+LLNEL  F+SLMK KG + +ANVAT  ++FHRGST GTKS+ SSSG+K ++KK  S
Subjt:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS

Query:  GKGPKAD-PTATTTKK
        G+G KA+   A TTKK
Subjt:  GKGPKAD-PTATTTKK

TYK23897.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-2461.61Show/hide
Query:  VNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNSGKG
        +N VVID+ SQVSF+L+SLP+SFLQF SNV+MNK+ Y  T LL ELH F+SLMK KG + +ANVAT  ++FHRGST GTKSV SSSG+K ++KK   G+G
Subjt:  VNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNSGKG

Query:  PKADPTATTTKK
         KA P A    K
Subjt:  PKADPTATTTKK

TYK28896.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-2564.35Show/hide
Query:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS
        V  +NG VIDE SQVSFILKSLP+SFLQF SN +MNK+ Y LT LLNEL  F+SLMK KG + +ANVAT  ++FHRGST GTKSV SSSG+K ++KK   
Subjt:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS

Query:  GKGPKADPTATTTKK
        G+G KA+P A  T K
Subjt:  GKGPKADPTATTTKK

TrEMBL top hitse value%identityAlignment
A0A5A7SLD1 Gag/pol protein4.2e-2462.93Show/hide
Query:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS
        V  +NG VIDE SQVSFIL+SLP+SFLQF SN +MNK+ Y LT +LNEL  F+SLMK KG + +ANVAT  ++FHRGST GTKS+ SSSG+K ++KK   
Subjt:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS

Query:  GKGPKAD-PTATTTKK
        G+G KA+  TA TTKK
Subjt:  GKGPKAD-PTATTTKK

A0A5A7TC08 Gag/pol protein1.3e-2564.35Show/hide
Query:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS
        V  +NG VIDE SQVSFILKSLP+SFLQF SN +MNK+ Y LT LLNEL  F+SLMK KG + +ANVAT  ++FHRGST GTKSV SSSG+K ++KK   
Subjt:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS

Query:  GKGPKADPTATTTKK
        G+G KA+P A  T K
Subjt:  GKGPKADPTATTTKK

A0A5A7UF91 Gag/pol protein4.2e-2462.93Show/hide
Query:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS
        V  +NG VIDE SQVSFIL+SLP+SFLQF +N +MNK+ Y LT+LLNEL  F+SLMK KG + +ANVAT  ++FHRGST GTKS+ SSSG+K ++KK  S
Subjt:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS

Query:  GKGPKAD-PTATTTKK
        G+G KA+   A TTKK
Subjt:  GKGPKAD-PTATTTKK

A0A5D3DJY0 Gag/pol protein8.5e-2561.61Show/hide
Query:  VNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNSGKG
        +N VVID+ SQVSF+L+SLP+SFLQF SNV+MNK+ Y  T LL ELH F+SLMK KG + +ANVAT  ++FHRGST GTKSV SSSG+K ++KK   G+G
Subjt:  VNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNSGKG

Query:  PKADPTATTTKK
         KA P A    K
Subjt:  PKADPTATTTKK

A0A5D3DYU3 Gag/pol protein1.3e-2564.35Show/hide
Query:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS
        V  +NG VIDE SQVSFILKSLP+SFLQF SN +MNK+ Y LT LLNEL  F+SLMK KG + +ANVAT  ++FHRGST GTKSV SSSG+K ++KK   
Subjt:  VTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVAT-LKQFHRGSTLGTKSVHSSSGSKTFEKKNNS

Query:  GKGPKADPTATTTKK
        G+G KA+P A  T K
Subjt:  GKGPKADPTATTTKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCGCTATCCTCTTGGGTCTCAGGATCGTGCTTGTGGGAACGTCGATTTGGAATAACTGCAAAAAACAAAGCAGTGACGTGGGTGAATGGGGTTGTCATAGA
CGAGGGGAGCCAGGTCAGCTTTATCTTGAAATCTCTTCCCAAGAGTTTCCTACAATTCCACAGCAATGTTTTGATGAACAAGGTAGAGTACAACCTTACCATGCTCTTGA
ATGAGCTACATATCTTTCAGTCTCTTATGAAAAATAAGGGACATGAAGAGAAGGCAAACGTTGCCACCTTAAAACAGTTCCATCGAGGTTCGACCTTGGGAACTAAATCT
GTGCATTCTTCTTCTGGAAGTAAGACTTTCGAGAAGAAGAACAACAGTGGTAAGGGGCCTAAAGCTGACCCTACTGCTACTACCACCAAGAAGGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTCGCTATCCTCTTGGGTCTCAGGATCGTGCTTGTGGGAACGTCGATTTGGAATAACTGCAAAAAACAAAGCAGTGACGTGGGTGAATGGGGTTGTCATAGA
CGAGGGGAGCCAGGTCAGCTTTATCTTGAAATCTCTTCCCAAGAGTTTCCTACAATTCCACAGCAATGTTTTGATGAACAAGGTAGAGTACAACCTTACCATGCTCTTGA
ATGAGCTACATATCTTTCAGTCTCTTATGAAAAATAAGGGACATGAAGAGAAGGCAAACGTTGCCACCTTAAAACAGTTCCATCGAGGTTCGACCTTGGGAACTAAATCT
GTGCATTCTTCTTCTGGAAGTAAGACTTTCGAGAAGAAGAACAACAGTGGTAAGGGGCCTAAAGCTGACCCTACTGCTACTACCACCAAGAAGGGCTAG
Protein sequenceShow/hide protein sequence
MSSSLSSWVSGSCLWERRFGITAKNKAVTWVNGVVIDEGSQVSFILKSLPKSFLQFHSNVLMNKVEYNLTMLLNELHIFQSLMKNKGHEEKANVATLKQFHRGSTLGTKS
VHSSSGSKTFEKKNNSGKGPKADPTATTTKKG