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Moc08g30140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g30140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr8:21556883..21559578
RNA-Seq ExpressionMoc08g30140
SyntenyMoc08g30140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045326.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-0652.94Show/hide
Query:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL
        H+  H+     + +EAT+ STRV D    S+R VD  +TS QSHPSQ L +PRRSGRIVSQL+ Y+ L
Subjt:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL

KAA0064277.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-0653.52Show/hide
Query:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVALEPE
        H  P ++VLN    EAT+ STRV D    S+R VD  +TS QSHPSQ L +PRRSGR+VSQ +RY+  E +
Subjt:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVALEPE

KAA0066794.1 gag/pol protein [Cucumis melo var. makuwa]4.7e-0753.75Show/hide
Query:  LEENQFFCRLPRHLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL
        LEE+Q     PR     ++VLN    EAT+ STRV +   +S+R VD  +TS QSHPSQ LI+PRRSGRIVSQ +RY+ L
Subjt:  LEENQFFCRLPRHLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL

TYJ96908.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-0652.94Show/hide
Query:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL
        H+  H+     + +EAT+ ST+V D    S+R VD  +TS QSHPSQ L +PRRSGRIVSQL+RY+ L
Subjt:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL

TYK27941.1 gag/pol protein [Cucumis melo var. makuwa]4.7e-0753.75Show/hide
Query:  LEENQFFCRLPRHLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL
        LEE+Q     PR     ++VLN    EAT+ STRV +   +S+R VD  +TS QSHPSQ LI+PRRSGRIVSQ +RY+ L
Subjt:  LEENQFFCRLPRHLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL

TrEMBL top hitse value%identityAlignment
A0A5A7TT67 Gag/pol protein1.1e-0652.94Show/hide
Query:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL
        H+  H+     + +EAT+ STRV D    S+R VD  +TS QSHPSQ L +PRRSGRIVSQL+ Y+ L
Subjt:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL

A0A5A7VB79 Gag/pol protein5.0e-0753.52Show/hide
Query:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVALEPE
        H  P ++VLN    EAT+ STRV D    S+R VD  +TS QSHPSQ L +PRRSGR+VSQ +RY+  E +
Subjt:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVALEPE

A0A5A7VHH5 Gag/pol protein2.3e-0753.75Show/hide
Query:  LEENQFFCRLPRHLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL
        LEE+Q     PR     ++VLN    EAT+ STRV +   +S+R VD  +TS QSHPSQ LI+PRRSGRIVSQ +RY+ L
Subjt:  LEENQFFCRLPRHLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL

A0A5D3BFD5 Gag/pol protein6.6e-0752.94Show/hide
Query:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL
        H+  H+     + +EAT+ ST+V D    S+R VD  +TS QSHPSQ L +PRRSGRIVSQL+RY+ L
Subjt:  HLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL

A0A5D3DWD1 Gag/pol protein2.3e-0753.75Show/hide
Query:  LEENQFFCRLPRHLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL
        LEE+Q     PR     ++VLN    EAT+ STRV +   +S+R VD  +TS QSHPSQ LI+PRRSGRIVSQ +RY+ L
Subjt:  LEENQFFCRLPRHLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCGGTTGGAACCACCAAAACGCATTGGAAGACGCATTTCATTAAAGGCAAAGTTGGAAGAAAACCAGTTTTTCTGCAGGCTTCCCAGGCACCTGGCGCCTCATGA
GATTGTGTTAAATGAGATTTATGATGAAGCTACAAATACATCTACAAGAGTTGCTGATAGAGCTAGCACTTCAACAAGAGTTGTTGATGGCGCTAGTACATCACGTCAGT
CACATCCATCTCAAAAGTTGATAGTGCCTCGACGTAGTGGGAGGATTGTGTCACAACTTGATCGTTATGTTGCTCTTGAGCCCGAAAAAGAGCGTTGTAACGGTTTGATC
TTGAACCATGGAAAGGATCGGGTTTCTTTTTGCTCTCGAAAGAAGAAGGCTTTATACCGGTTTGACTTCTACCGTGGAAAGAGTCAAATTTTCTTAATCGAATACCCAAG
AGGCGCTTGGGGGGTGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATCGGTTGGAACCACCAAAACGCATTGGAAGACGCATTTCATTAAAGGCAAAGTTGGAAGAAAACCAGTTTTTCTGCAGGCTTCCCAGGCACCTGGCGCCTCATGA
GATTGTGTTAAATGAGATTTATGATGAAGCTACAAATACATCTACAAGAGTTGCTGATAGAGCTAGCACTTCAACAAGAGTTGTTGATGGCGCTAGTACATCACGTCAGT
CACATCCATCTCAAAAGTTGATAGTGCCTCGACGTAGTGGGAGGATTGTGTCACAACTTGATCGTTATGTTGCTCTTGAGCCCGAAAAAGAGCGTTGTAACGGTTTGATC
TTGAACCATGGAAAGGATCGGGTTTCTTTTTGCTCTCGAAAGAAGAAGGCTTTATACCGGTTTGACTTCTACCGTGGAAAGAGTCAAATTTTCTTAATCGAATACCCAAG
AGGCGCTTGGGGGGTGGAATAG
Protein sequenceShow/hide protein sequence
MHRLEPPKRIGRRISLKAKLEENQFFCRLPRHLAPHEIVLNEIYDEATNTSTRVADRASTSTRVVDGASTSRQSHPSQKLIVPRRSGRIVSQLDRYVALEPEKERCNGLI
LNHGKDRVSFCSRKKKALYRFDFYRGKSQIFLIEYPRGAWGVE