| GenBank top hits | e value | %identity | Alignment |
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| CAN74767.1 hypothetical protein VITISV_041860, partial [Vitis vinifera] | 6.0e-47 | 42.64 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++ D PLG NPT+ ++ +EEEKLKK KV++ +H+ L D IF +I++ T K+ WDKL EFEGS R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F +Q+VV+KIMVSVP KFE+KISAIEES D+ TL+I EL SKL AQE R MR +E EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKGGASKNGKFPPCRFCKKTNHAEKDCWSTLSVQVETGDRVRAWFVKNRCAN
+K K+ K + G+S+ GKFP C C++TNHAEKDCW + + + W + + C +
Subjt: QDDRKSTKDRGSKGKGGASKNGKFPPCRFCKKTNHAEKDCWSTLSVQVETGDRVRAWFVKNRCAN
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| RVW14603.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 4.6e-47 | 46.69 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++AD PLG NPT+ ++ +EEEKLKK K ++ +H+ L + IF +I++ T K+ WDKL EFEG+ R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F +Q+VV+KIMVSVP KFE+KISAIEES D+ TL+I EL SKL AQE R MR +E +EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
+K K+ S+GK G+S+ GKFPPC CK+TNHAEKDCW
Subjt: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
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| RVW63137.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 6.0e-47 | 47.11 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++AD PLG NPT+ ++ +EEEKLKK KV++ +H+ L D IF +I++ T K+ WDKL EF+GS R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F NQ+VV+KIMVSVP KFE+KIS IEES D+ TL+I EL SKL AQE R MR +E EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
+K K+ S+GK G+S+ GKF PC CK+TNHAEKDCW
Subjt: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
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| RVW63791.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.6e-47 | 47.52 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++AD PLG NPT+ ++ +EEEKLKK K ++ +H+ L D IF +I++ T K+ WDKL EFEGS R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F +Q+VV+KIMVSVP KFE+KISAIEES D+ TL+I EL SKL AQE R MR +E EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
+K K+ S+GK G+S+ GKFPPC CK+TNHAEKDCW
Subjt: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
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| RVW70519.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.2e-47 | 47.52 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++AD PLG NPT+ ++ +EEEKLKK K ++ +H+ L D IF +I++ T K+ WDKL EFEGS R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F +Q+VV+KIMVSVP KFE+KISAIEES D+ TL+I EL SKL AQE R MR +E EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
+K K+ S+GK G+S+ GKFPPC CK+TNHAEKDCW
Subjt: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438BUF2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.2e-47 | 46.69 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++AD PLG NPT+ ++ +EEEKLKK K ++ +H+ L + IF +I++ T K+ WDKL EFEG+ R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F +Q+VV+KIMVSVP KFE+KISAIEES D+ TL+I EL SKL AQE R MR +E +EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
+K K+ S+GK G+S+ GKFPPC CK+TNHAEKDCW
Subjt: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
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| A0A438FT52 Retrovirus-related Pol polyprotein from transposon RE1 | 2.9e-47 | 47.11 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++AD PLG NPT+ ++ +EEEKLKK KV++ +H+ L D IF +I++ T K+ WDKL EF+GS R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F NQ+VV+KIMVSVP KFE+KIS IEES D+ TL+I EL SKL AQE R MR +E EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
+K K+ S+GK G+S+ GKF PC CK+TNHAEKDCW
Subjt: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
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| A0A438FV11 Retrovirus-related Pol polyprotein from transposon RE1 | 7.7e-48 | 47.52 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++AD PLG NPT+ ++ +EEEKLKK K ++ +H+ L D IF +I++ T K+ WDKL EFEGS R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F +Q+VV+KIMVSVP KFE+KISAIEES D+ TL+I EL SKL AQE R MR +E EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
+K K+ S+GK G+S+ GKFPPC CK+TNHAEKDCW
Subjt: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
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| A0A438GE89 Retrovirus-related Pol polyprotein from transposon RE1 | 5.9e-48 | 47.52 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++AD PLG NPT+ ++ +EEEKLKK K ++ +H+ L D IF +I++ T K+ WDKL EFEGS R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F +Q+VV+KIMVSVP KFE+KISAIEES D+ TL+I EL SKL AQE R MR +E EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
+K K+ S+GK G+S+ GKFPPC CK+TNHAEKDCW
Subjt: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
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| A5BPR9 Integrase catalytic domain-containing protein | 2.9e-47 | 47.11 | Show/hide |
Query: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
M+ YL+S GLW + ++AD PLG NPT+ ++ +EEEKLKK KV++ +H+ L D IF +I++ T K+ WDKL EF+GS R+
Subjt: MQSYLKSLGLWESISTDADLEPLGENPTLNRIILHEEEKLKKPKVLSVIHASLFDPIFARIIDCTTTKEAWDKLHEEFEGSARI----------------
Query: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
RL GE F NQ+VV+KIMVSVP KFE+KIS IEES D+ TL+I EL SKL AQE R MR +E EGAF KGK S
Subjt: ---------------------RLAGEDFPNQRVVKKIMVSVPSKFESKISAIEESSDMTTLSIAELISKLQAQEHRDTMRNEEHVEGAFNVKFKGKKSAA
Query: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
+K K+ S+GK G+S+ GKF PC CK+TNHAEKDCW
Subjt: QDDRKSTKDRGSKGKG-GASKNGKFPPCRFCKKTNHAEKDCW
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