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Moc08g30260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g30260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4219 domain-containing protein
Genome locationchr8:21677865..21682354
RNA-Seq ExpressionMoc08g30260
SyntenyMoc08g30260
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW30779.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]6.5e-2454.72Show/hide
Query:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK
        SSN    S P F+GENYQ W VKM++YL+ LG+ + V T+  ++PL  NPTLN IR HEEE+ K P+ALS IHA++S+P F +I+ C+  KEAWDKL+E 
Subjt:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK

Query:  FEGSAR
        + GS R
Subjt:  FEGSAR

RVW40505.1 hypothetical protein CK203_081520 [Vitis vinifera]2.2e-2455.66Show/hide
Query:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK
        SSN    S P F+GENYQ W VKM++YL+ LG+ + V T+  ++PL  NPTLN IR HEEE+ K P+ALS IHA++S+P F +I+ CK  KEAWDKL+E 
Subjt:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK

Query:  FEGSAR
        + GS R
Subjt:  FEGSAR

RVW71674.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]6.5e-2454.72Show/hide
Query:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK
        SSN    S P F+GENYQ W VKM++YL+ LG+ + V T+  ++PL  NPTLN IR HEEE+ K P+ALS IHA++S+P F +I+ C+  KEAWDKL+E 
Subjt:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK

Query:  FEGSAR
        + GS R
Subjt:  FEGSAR

XP_010665180.1 PREDICTED: uncharacterized protein LOC104882691 [Vitis vinifera]6.5e-2454.72Show/hide
Query:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK
        SSN    S P F+GENYQ W VKM++YL+ LG+ + V T+  ++PL  NPTLN IR HEEE+ K P+ALS IHA++S+P F +I+ C+  KEAWDKL+E 
Subjt:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK

Query:  FEGSAR
        + GS R
Subjt:  FEGSAR

XP_022156661.1 uncharacterized protein LOC111023510 [Momordica charantia]3.7e-3577.98Show/hide
Query:  MSSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQE
        MSSNF VTS P FSGENYQFW VKMQSYLK LG+ E VSTD DLEPL EN TLN I LHEE+KL KPK LSIIHASLS+P FAKIIDCK AKEA DKLQE
Subjt:  MSSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQE

Query:  KFEGSARIE
        +FEGS   E
Subjt:  KFEGSARIE

TrEMBL top hitse value%identityAlignment
A0A438D5L0 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-2454.72Show/hide
Query:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK
        SSN    S P F+GENYQ W VKM++YL+ LG+ + V T+  ++PL  NPTLN IR HEEE+ K P+ALS IHA++S+P F +I+ C+  KEAWDKL+E 
Subjt:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK

Query:  FEGSAR
        + GS R
Subjt:  FEGSAR

A0A438DYD6 DUF4219 domain-containing protein1.1e-2455.66Show/hide
Query:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK
        SSN    S P F+GENYQ W VKM++YL+ LG+ + V T+  ++PL  NPTLN IR HEEE+ K P+ALS IHA++S+P F +I+ CK  KEAWDKL+E 
Subjt:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK

Query:  FEGSAR
        + GS R
Subjt:  FEGSAR

A0A438GHK4 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-2454.72Show/hide
Query:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK
        SSN    S P F+GENYQ W VKM++YL+ LG+ + V T+  ++PL  NPTLN IR HEEE+ K P+ALS IHA++S+P F +I+ C+  KEAWDKL+E 
Subjt:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK

Query:  FEGSAR
        + GS R
Subjt:  FEGSAR

A0A438J6B0 Retrovirus-related Pol polyprotein from transposon RE13.1e-2454.72Show/hide
Query:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK
        SSN    S P F+GENYQ W VKM++YL+ LG+ + V T+  ++PL  NPTLN IR HEEE+ K P+ALS IHA++S+P F +I+ C+  KEAWDKL+E 
Subjt:  SSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEK

Query:  FEGSAR
        + GS R
Subjt:  FEGSAR

A0A6J1DVL9 uncharacterized protein LOC1110235101.8e-3577.98Show/hide
Query:  MSSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQE
        MSSNF VTS P FSGENYQFW VKMQSYLK LG+ E VSTD DLEPL EN TLN I LHEE+KL KPK LSIIHASLS+P FAKIIDCK AKEA DKLQE
Subjt:  MSSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQE

Query:  KFEGSARIE
        +FEGS   E
Subjt:  KFEGSARIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCAAATTTTGGTGTTACCTCTGCTCCAAATTTTAGTGGTGAAAACTACCAATTTTGGGTTGTTAAAATGCAATCCTATCTCAAAGTACTTGGCATTTCGGAACC
AGTTTCAACAGATGCTGATCTCGAGCCATTGGTAGAAAATCCAACATTGAATCATATCAGATTACATGAAGAGGAGAAGTTAAAGAAGCCTAAAGCTTTATCTATAATTC
ATGCTTCTTTATCTGATCCTAAATTTGCTAAAATTATTGATTGTAAAATAGCAAAAGAAGCTTGGGATAAATTACAGGAGAAATTTGAAGGAAGTGCAAGGATTGAATCT
TCTTTTGATTCAATTGACTCTAATGATCAAGATAACCAAGATCCTCATTCGAATGATGATGATCTTGTTGATGCAACTGGTGATGGTTCAAATTACAAGGTGCATAAGCG
GGTTTCGTGGGAGACTGTTGGTTACGGTTTAGAACCCTTTGTGCAAGTGTACACAACTGTTGTAGCAAGTGATAAAAAGATTGTCTCCACAGGGATTGATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCAAATTTTGGTGTTACCTCTGCTCCAAATTTTAGTGGTGAAAACTACCAATTTTGGGTTGTTAAAATGCAATCCTATCTCAAAGTACTTGGCATTTCGGAACC
AGTTTCAACAGATGCTGATCTCGAGCCATTGGTAGAAAATCCAACATTGAATCATATCAGATTACATGAAGAGGAGAAGTTAAAGAAGCCTAAAGCTTTATCTATAATTC
ATGCTTCTTTATCTGATCCTAAATTTGCTAAAATTATTGATTGTAAAATAGCAAAAGAAGCTTGGGATAAATTACAGGAGAAATTTGAAGGAAGTGCAAGGATTGAATCT
TCTTTTGATTCAATTGACTCTAATGATCAAGATAACCAAGATCCTCATTCGAATGATGATGATCTTGTTGATGCAACTGGTGATGGTTCAAATTACAAGGTGCATAAGCG
GGTTTCGTGGGAGACTGTTGGTTACGGTTTAGAACCCTTTGTGCAAGTGTACACAACTGTTGTAGCAAGTGATAAAAAGATTGTCTCCACAGGGATTGATAACTAA
Protein sequenceShow/hide protein sequence
MSSNFGVTSAPNFSGENYQFWVVKMQSYLKVLGISEPVSTDADLEPLVENPTLNHIRLHEEEKLKKPKALSIIHASLSDPKFAKIIDCKIAKEAWDKLQEKFEGSARIES
SFDSIDSNDQDNQDPHSNDDDLVDATGDGSNYKVHKRVSWETVGYGLEPFVQVYTTVVASDKKIVSTGIDN