CuGenDBv2

Gene ID	Moc08g30280
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome location	chr8:21685804..21687183
RNA-Seq Expression	Moc08g30280
Synteny	Moc08g30280
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR006564 - Zinc finger, PMZ-type IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022150312.1 uncharacterized protein LOC111018510 [Momordica charantia]

1.5e-117

100

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
        IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT

Query:  TVSDVDGV
        TVSDVDGV
Subjt:  TVSDVDGV

XP_022153251.1 uncharacterized protein LOC111020787 [Momordica charantia]

5.9e-85

76.5

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        V+VHAR+LPVTALLEH RALLQ WFYERRTY SSRETILTDYGE KMRTAEN+++TH + PI+HHE +V DGLK VRVNLN  TCGCK+FDYFQ PCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
        IAVAT R VNRYTLCSP Y+LQTLI AYA+ VYP  D +DWILPDDFV+  VE  + V  +G+RQTVRI S GETRQ HKCGRCGNMGHN+KTCRQPLRT
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]

7.7e-69

69.35

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        V+ HARALPVTALLE   AL+Q WFYERRTYASSRETILTDYGE KMR AEN+++ + + PI+ HE +V DGLK  RVNLN  TCGCK+FD+++ PCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGN
        IA  T +NVNRY+LCSP YSLQTLI AYAE VYP  D +DW+LPD+FV   VEP KIV+ +G+RQTVRI S GETRQ  KCGRCGN
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGN

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]

1.8e-09

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Query:  MRKTYGVNMRYEKAWQAKNVSLNLLMGSPKESYTLLRKYGEALKQRHSGS
        MRK YGVN+RYEKAW+AK V+LN+L+GSPKESY  LR+Y EALK  ++G+
Subjt:  MRKTYGVNMRYEKAWQAKNVSLNLLMGSPKESYTLLRKYGEALKQRHSGS

XP_022155392.1 uncharacterized protein LOC111022536 [Momordica charantia]

1.5e-80

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        V+VHAR+L VT LLEH   LLQ WFYERRTYAS+RETILTDYGE KMRTAEN+++TH + PI+HHE +VS+GLK VRVNLN  TCGCK+FDYFQ PCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
        IA AT RNVNRYTLCSP Y+LQTLI AY E  YP  D +DWILPDDFV+  VEP + V  VG+ QTVRI S GETRQ HKCG C NMGHN+KTC QPLRT
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT

XP_022156830.1 uncharacterized protein LOC111023664 [Momordica charantia]

4.2e-83

74.5

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        V+VHAR+LPVTALLEH RALLQ WFYERRTYASSRETILT+YGE KMRT EN+++TH + PI+HH+ +VSDGLK VRVNLN  TC CK+FDYFQFPCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
        IA  T  NVNRYTLCSP Y++QTLI  Y E VYP  D DDWILPDDFV+  VEP + V  VG+RQT+RI S GETRQ HKCG CGNMGHN+KTCRQPLRT
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DAE4 uncharacterized protein LOC111018510

7.4e-118

100

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
        IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT

Query:  TVSDVDGV
        TVSDVDGV
Subjt:  TVSDVDGV

A0A6J1DK28 uncharacterized protein LOC111020787

2.8e-85

76.5

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        V+VHAR+LPVTALLEH RALLQ WFYERRTY SSRETILTDYGE KMRTAEN+++TH + PI+HHE +V DGLK VRVNLN  TCGCK+FDYFQ PCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
        IAVAT R VNRYTLCSP Y+LQTLI AYA+ VYP  D +DWILPDDFV+  VE  + V  +G+RQTVRI S GETRQ HKCGRCGNMGHN+KTCRQPLRT
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT

A0A6J1DL12 uncharacterized protein LOC111022077

3.7e-69

69.35

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        V+ HARALPVTALLE   AL+Q WFYERRTYASSRETILTDYGE KMR AEN+++ + + PI+ HE +V DGLK  RVNLN  TCGCK+FD+++ PCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGN
        IA  T +NVNRY+LCSP YSLQTLI AYAE VYP  D +DW+LPD+FV   VEP KIV+ +G+RQTVRI S GETRQ  KCGRCGN
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGN

A0A6J1DL12 uncharacterized protein LOC111022077

8.7e-10

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Query:  MRKTYGVNMRYEKAWQAKNVSLNLLMGSPKESYTLLRKYGEALKQRHSGS
        MRK YGVN+RYEKAW+AK V+LN+L+GSPKESY  LR+Y EALK  ++G+
Subjt:  MRKTYGVNMRYEKAWQAKNVSLNLLMGSPKESYTLLRKYGEALKQRHSGS

A0A6J1DP73 uncharacterized protein LOC111022536

7.2e-81

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        V+VHAR+L VT LLEH   LLQ WFYERRTYAS+RETILTDYGE KMRTAEN+++TH + PI+HHE +VS+GLK VRVNLN  TCGCK+FDYFQ PCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
        IA AT RNVNRYTLCSP Y+LQTLI AY E  YP  D +DWILPDDFV+  VEP + V  VG+ QTVRI S GETRQ HKCG C NMGHN+KTC QPLRT
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT

A0A6J1DRF6 uncharacterized protein LOC111023664

2.0e-83

74.5

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Query:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA
        V+VHAR+LPVTALLEH RALLQ WFYERRTYASSRETILT+YGE KMRT EN+++TH + PI+HH+ +VSDGLK VRVNLN  TC CK+FDYFQFPCSHA
Subjt:  VVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYGETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHA

Query:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT
        IA  T  NVNRYTLCSP Y++QTLI  Y E VYP  D DDWILPDDFV+  VEP + V  VG+RQT+RI S GETRQ HKCG CGNMGHN+KTCRQPLRT
Subjt:  IAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVEPSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64255.1 MuDR family transposase

1.4e-04

30.38

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Query:  VAQTHPVIPINHHEFDVSDGLKMVR--VNLNTMTCGCKQFDYFQFPCSHAIAVATLRNVNRYTLCSPTYSLQTLITAYA
        V  ++ V P++++ F V+  L      V L+  +C C  F  ++FPC HA+AV      N        Y+L+ L   YA
Subjt:  VAQTHPVIPINHHEFDVSDGLKMVR--VNLNTMTCGCKQFDYFQFPCSHAIAVATLRNVNRYTLCSPTYSLQTLITAYA

AT1G64260.1 MuDR family transposase

5.8e-06

33.33

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Query:  VNLNTMTCGCKQFDYFQFPCSHAIAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDD
        V LN  TC C++F  ++FPC HA+AV     +N        Y+++     YA +  P  D+  W  P+D
Subjt:  VNLNTMTCGCKQFDYFQFPCSHAIAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDD

Sequences

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CDS sequence

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ATGCGAAAGACTTATGGGGTTAACATGAGATATGAAAAGGCATGGCAGGCAAAAAATGTGTCATTGAATTTGTTGATGGGATCACCCAAAGAGTCCTATACTCTGTTACG
CAAGTATGGAGAAGCCCTGAAGCAAAGGCATTCCGGAAGTCAGAGTTTACATACTATTTCTCCCAACTTGCACGATTTCCAGAAGTCCAAAGTCGTTGTACATGCACGTG
CATTGCCAGTAACCGCACTTCTTGAACATGTTCGAGCGCTGTTGCAGTGGTGGTTTTACGAGAGGCGAACATATGCATCTAGTCGCGAAACTATCCTTACTGACTATGGT
GAGACAAAGATGCGTACTGCAGAGAACGTGGCTCAAACACACCCCGTGATACCCATTAACCATCATGAGTTCGACGTGAGCGATGGACTGAAAATGGTGCGTGTGAATTT
AAATACAATGACATGTGGATGTAAACAGTTTGACTACTTCCAGTTCCCGTGCTCCCATGCTATTGCAGTAGCAACCCTTCGGAACGTGAACAGGTATACCCTATGCTCTC
CTACATATAGTCTGCAAACTCTAATTACCGCATATGCCGAATCTGTGTACCCTCCCAACGATATAGATGACTGGATTTTACCTGATGACTTCGTGGAGGTTGAAGTGGAG
CCATCCAAAATTGTAAAACATGTTGGCCAACGCCAAACTGTACGAATATCGTCGGTCGGGGAGACCCGCCAATTCCACAAATGTGGTCGATGTGGCAACATGGGACACAA
TAAAAAAACGTGTCGTCAGCCACTTAGAACTACTGTATCAGACGTTGATGGTGTGTAA

mRNA sequence

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Protein sequence

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MRKTYGVNMRYEKAWQAKNVSLNLLMGSPKESYTLLRKYGEALKQRHSGSQSLHTISPNLHDFQKSKVVVHARALPVTALLEHVRALLQWWFYERRTYASSRETILTDYG
ETKMRTAENVAQTHPVIPINHHEFDVSDGLKMVRVNLNTMTCGCKQFDYFQFPCSHAIAVATLRNVNRYTLCSPTYSLQTLITAYAESVYPPNDIDDWILPDDFVEVEVE
PSKIVKHVGQRQTVRISSVGETRQFHKCGRCGNMGHNKKTCRQPLRTTVSDVDGV

Moc08g30280 (gene) of Bitter gourd (OHB3-1) v2 genome