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Moc08g30430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g30430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:21801043..21803721
RNA-Seq ExpressionMoc08g30430
SyntenyMoc08g30430
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]1.2e-3766.67Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV--QTHVGALDPAWEG
        RSVPVEIL+NPSISEPDLMEIG PESSWMDPIADFIRGNSPQDPKERRKL RRAARFVVRG ALYRRGFSLPLLRCLTPEEGL V  + H G        
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV--QTHVGALDPAWEG

Query:  PFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRY
              ++R G Y    L  DV       ++ +RY
Subjt:  PFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRY

XP_022142324.1 uncharacterized protein LOC111012466 [Momordica charantia]7.9e-3764.44Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV--QTHVGALDPAWEG
        RSVP+EIL+NPSISEPDLMEIG PESSWMDPIADFIRGNSPQDP E RKL RRAARFVVRGGALYRRGFSLPLLRCLTP+EGL V  + H G       G
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV--QTHVGALDPAWEG

Query:  PFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRY
           +   V P  Y    L  D        ++ +RY
Subjt:  PFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRY

XP_022143486.1 uncharacterized protein LOC111013362 [Momordica charantia]1.4e-3694.12Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV
        RSVPVEIL+NPSISEPDLMEIG PESSWMDPIADFIRGNSPQDPKERRKL RRAARFVVR GALYRRGFSLPLLRCLTPEEGL V
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV

XP_022158219.1 protein NYNRIN-like [Momordica charantia]2.0e-3588.76Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRVQTHV
        RSVPVEIL+NPSISEPDLMEIG PESSWMDPIADFIRGNSPQDPKERRKL  R ARFVVR GALYRRGFSLPLLRCLTPEEGL V   V
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRVQTHV

XP_022158520.1 uncharacterized protein LOC111024991 [Momordica charantia]4.8e-3486.9Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLR
        RSVPVEIL+NPSI EPDLMEIG PESSWM+PI DFI+GNSPQDPKERRKL RRAARFV+R GALYRRGFSLPLL+CLTPEEGL+
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLR

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H5.9e-3866.67Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV--QTHVGALDPAWEG
        RSVPVEIL+NPSISEPDLMEIG PESSWMDPIADFIRGNSPQDPKERRKL RRAARFVVRG ALYRRGFSLPLLRCLTPEEGL V  + H G        
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV--QTHVGALDPAWEG

Query:  PFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRY
              ++R G Y    L  DV       ++ +RY
Subjt:  PFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRY

A0A6J1CL97 uncharacterized protein LOC1110124663.8e-3764.44Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV--QTHVGALDPAWEG
        RSVP+EIL+NPSISEPDLMEIG PESSWMDPIADFIRGNSPQDP E RKL RRAARFVVRGGALYRRGFSLPLLRCLTP+EGL V  + H G       G
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV--QTHVGALDPAWEG

Query:  PFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRY
           +   V P  Y    L  D        ++ +RY
Subjt:  PFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRY

A0A6J1CQD7 Ribonuclease H6.6e-3794.12Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV
        RSVPVEIL+NPSISEPDLMEIG PESSWMDPIADFIRGNSPQDPKERRKL RRAARFVVR GALYRRGFSLPLLRCLTPEEGL V
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRV

A0A6J1DW30 Ribonuclease H2.3e-3486.9Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLR
        RSVPVEIL+NPSI EPDLMEIG PESSWM+PI DFI+GNSPQDPKERRKL RRAARFV+R GALYRRGFSLPLL+CLTPEEGL+
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLR

A0A6J1DYS0 Ribonuclease H9.5e-3688.76Show/hide
Query:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRVQTHV
        RSVPVEIL+NPSISEPDLMEIG PESSWMDPIADFIRGNSPQDPKERRKL  R ARFVVR GALYRRGFSLPLLRCLTPEEGL V   V
Subjt:  RSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPEEGLRVQTHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGACCTACCGGGAAGCTCGGTGGGGGCCGATGTCCGCCCAAGTGTTCAGATCGGTCGGTCCCCGTCGAGAT
CTTAAATAATCCCTCGATCTCAGAGCCAGATCTGATGGAGATCGGCGTTCCAGAATCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGCAACTCACCACAAGACC
CCAAGGAGCGCAGAAAGTTGGTAAGGCGAGCAGCTCGGTTCGTGGTCCGAGGTGGAGCATTATACCGACGCGGCTTTTCCCTGCCTCTATTGAGGTGCCTAACCCCTGAA
GAGGGCCTGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGGCCTGGGAGGGGCCGTTTGAGGTCAAGGGCATAGTTCGACCTGGGACGTACGTATTGGCCGATCTGAA
AGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGACCTACCGGGAAGCTCGGTGGGGGCCGATGTCCGCCCAAGTGTTCAGATCGGTCGGTCCCCGTCGAGAT
CTTAAATAATCCCTCGATCTCAGAGCCAGATCTGATGGAGATCGGCGTTCCAGAATCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGCAACTCACCACAAGACC
CCAAGGAGCGCAGAAAGTTGGTAAGGCGAGCAGCTCGGTTCGTGGTCCGAGGTGGAGCATTATACCGACGCGGCTTTTCCCTGCCTCTATTGAGGTGCCTAACCCCTGAA
GAGGGCCTGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGGCCTGGGAGGGGCCGTTTGAGGTCAAGGGCATAGTTCGACCTGGGACGTACGTATTGGCCGATCTGAA
AGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MLSMRAEVNLAEVRPTGKLGGGRCPPKCSDRSVPVEILNNPSISEPDLMEIGVPESSWMDPIADFIRGNSPQDPKERRKLVRRAARFVVRGGALYRRGFSLPLLRCLTPE
EGLRVQTHVGALDPAWEGPFEVKGIVRPGTYVLADLKGDVLAHPWNAEHLKRYYP