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Moc08g30450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g30450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon protein
Genome locationchr8:21816621..21817008
RNA-Seq ExpressionMoc08g30450
SyntenyMoc08g30450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER54441.1 transposon protein [Striga asiatica]3.0e-0434.78Show/hide
Query:  SDPKVLETVLGYGSGYVKSVGWGPKPKSHREFEDRFSQKDKELEDRLSQKDKELDEHLAAKESEITGLRGEMSDLRSMVLQLMSRSSGASSS
        S+  +L  VLG+GSGY+K  G+GP+P S R   D  SQK+KEL+D   +  K   E +  KE +++ L+ ++S   + + ++M+  + + +S
Subjt:  SDPKVLETVLGYGSGYVKSVGWGPKPKSHREFEDRFSQKDKELEDRLSQKDKELDEHLAAKESEITGLRGEMSDLRSMVLQLMSRSSGASSS
TrEMBL top hitse value%identityAlignment
A0A5A7RDH7 Transposon protein1.4e-0434.78Show/hide
Query:  SDPKVLETVLGYGSGYVKSVGWGPKPKSHREFEDRFSQKDKELEDRLSQKDKELDEHLAAKESEITGLRGEMSDLRSMVLQLMSRSSGASSS
        S+  +L  VLG+GSGY+K  G+GP+P S R   D  SQK+KEL+D   +  K   E +  KE +++ L+ ++S   + + ++M+  + + +S
Subjt:  SDPKVLETVLGYGSGYVKSVGWGPKPKSHREFEDRFSQKDKELEDRLSQKDKELDEHLAAKESEITGLRGEMSDLRSMVLQLMSRSSGASSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGACCCAAAAGTATTGGAAACAGTTCTTGGGTATGGATCAGGCTACGTTAAGAGTGTTGGTTGGGGCCCAAAACCAAAGTCTCATAGAGAGTTTGAGGATCGTTT
CTCTCAGAAAGACAAAGAGCTTGAGGATCGTCTCTCTCAGAAAGATAAGGAGTTAGATGAGCATCTCGCAGCCAAAGAATCTGAGATTACGGGTCTACGCGGTGAAATGT
CAGATTTGAGATCAATGGTGCTACAACTTATGAGTCGGTCTAGTGGAGCCAGCTCGTCAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGACCCAAAAGTATTGGAAACAGTTCTTGGGTATGGATCAGGCTACGTTAAGAGTGTTGGTTGGGGCCCAAAACCAAAGTCTCATAGAGAGTTTGAGGATCGTTT
CTCTCAGAAAGACAAAGAGCTTGAGGATCGTCTCTCTCAGAAAGATAAGGAGTTAGATGAGCATCTCGCAGCCAAAGAATCTGAGATTACGGGTCTACGCGGTGAAATGT
CAGATTTGAGATCAATGGTGCTACAACTTATGAGTCGGTCTAGTGGAGCCAGCTCGTCAAAATAG
Protein sequenceShow/hide protein sequence
MSDPKVLETVLGYGSGYVKSVGWGPKPKSHREFEDRFSQKDKELEDRLSQKDKELDEHLAAKESEITGLRGEMSDLRSMVLQLMSRSSGASSSK