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Moc08g30460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g30460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr8:21819650..21822727
RNA-Seq ExpressionMoc08g30460
SyntenyMoc08g30460
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]1.6e-2952.73Show/hide
Query:  DDEDHEYKMVGDAPIDDLE-DDDYLETENDDDNEVDEPVCDGNSSSRTP-----------------------------------VGSTVFSSAFRSKDEL
        DDEDHEY+MVG    DDLE DDDY E E++DDNE DEPV DG+ S RTP                                   V      S FRSKDEL
Subjt:  DDEDHEYKMVGDAPIDDLE-DDDYLETENDDDNEVDEPVCDGNSSSRTP-----------------------------------VGSTVFSSAFRSKDEL

Query:  QFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL
        +F LA+F I++N E++VKKST  LL VACKE+GC+WALRAR+IKG DTFLISTF E H  ER TL
Subjt:  QFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]1.5e-1151.14Show/hide
Query:  FFEKHSCERATLSTTIDKLVVEWLV--RYRTGTHITAYVEPLFPLGDEEDCILLDDYVPTTIKPPLFPLDDYVPHVGRRQTVRIPSAG
        ++ +  C  A     +  + V  L   RYR  T I AYVEP++PLGDEED IL  DYVPTTI+PP F     VP VGR QT RIPS G
Subjt:  FFEKHSCERATLSTTIDKLVVEWLV--RYRTGTHITAYVEPLFPLGDEEDCILLDDYVPTTIKPPLFPLDDYVPHVGRRQTVRIPSAG

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]2.5e-2274.67Show/hide
Query:  SAFRSKDELQFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS
        S FRSKDEL+FKLA+F I +N EY+VKKST KLL VAC E GCKWALR RRIKG +TFLISTF E HSCER+TL+
Subjt:  SAFRSKDELQFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS

XP_022156802.1 uncharacterized protein LOC111023635 [Momordica charantia]3.7e-1336.55Show/hide
Query:  YCPSSILLDEVEGEDDEDHE-YKMVGDAPIDDLEDDDYLETENDDDNEVDEPVCDGNSSSRTPVGSTVFSSAFRSKDELQFKLAIFTIKRNLEYRVKKST
        Y    +L +  E E    HE + + G+AP   +E+      +N         +  GN S    +G       FRSK+EL+FKL++  +K N +++VKKST
Subjt:  YCPSSILLDEVEGEDDEDHE-YKMVGDAPIDDLEDDDYLETENDDDNEVDEPVCDGNSSSRTPVGSTVFSSAFRSKDELQFKLAIFTIKRNLEYRVKKST

Query:  MKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS
          L  V C E+GCKW LRA+ I+G D+F+IS F + H C+R  L+
Subjt:  MKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS

XP_022157237.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]2.6e-1150Show/hide
Query:  KGFDTFLISTFFEKHSCERATLSTTIDKLVVEWLV--RYRTGTHITAYVEPLFPLGDEEDCILLDDYVPTTIKPPLFPLDDYVPHVGRRQTVRIPSAG
        K FD F I       +C  A        + V  L   RY+  T I  Y EP++PLGDEED IL DDYVP TIKPP F     VP VGR QT RIPSAG
Subjt:  KGFDTFLISTFFEKHSCERATLSTTIDKLVVEWLV--RYRTGTHITAYVEPLFPLGDEEDCILLDDYVPTTIKPPLFPLDDYVPHVGRRQTVRIPSAG

XP_022157237.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]1.1e-1456.76Show/hide
Query:  SAFRSKDELQFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL
        S FRSK+ELQFKL++F ++ N EY VKKST  L  + C E GCKW+   R+I+G D FLISTF+E HSC R  +
Subjt:  SAFRSKDELQFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL

XP_022158254.1 uncharacterized protein LOC111024785 [Momordica charantia]2.0e-1164.91Show/hide
Query:  IKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL
        +K N EYRVKKST  L  V C E GCKW+LR+R+IKG DTFLISTF+E HSC R  +
Subjt:  IKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL

TrEMBL top hitse value%identityAlignment
A0A6J1DL12 uncharacterized protein LOC1110220772.2e-1136.13Show/hide
Query:  DEVEGEDDEDHEYKMVGDAPIDDLEDDDYLETENDDD--------------NEVDE-PVCDGNSSSRTP----VGSTVFSSAFRSKDELQFKLAIFTIKR
        D+ E E + +H +    D  I+D  D+   +  N+ +              + V E P C   + + T     VG  V    FRSKDEL+FKL +  +K 
Subjt:  DEVEGEDDEDHEYKMVGDAPIDDLEDDDYLETENDDD--------------NEVDE-PVCDGNSSSRTP----VGSTVFSSAFRSKDELQFKLAIFTIKR

Query:  NLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS
        N E+RVKKST  L  V C E GCKW L A RI+G D+F IS + + H+C +  L+
Subjt:  NLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS

A0A6J1DLB0 uncharacterized protein LOC1110219697.9e-3052.73Show/hide
Query:  DDEDHEYKMVGDAPIDDLE-DDDYLETENDDDNEVDEPVCDGNSSSRTP-----------------------------------VGSTVFSSAFRSKDEL
        DDEDHEY+MVG    DDLE DDDY E E++DDNE DEPV DG+ S RTP                                   V      S FRSKDEL
Subjt:  DDEDHEYKMVGDAPIDDLE-DDDYLETENDDDNEVDEPVCDGNSSSRTP-----------------------------------VGSTVFSSAFRSKDEL

Query:  QFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL
        +F LA+F I++N E++VKKST  LL VACKE+GC+WALRAR+IKG DTFLISTF E H  ER TL
Subjt:  QFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL

A0A6J1DLB0 uncharacterized protein LOC1110219697.5e-1251.14Show/hide
Query:  FFEKHSCERATLSTTIDKLVVEWLV--RYRTGTHITAYVEPLFPLGDEEDCILLDDYVPTTIKPPLFPLDDYVPHVGRRQTVRIPSAG
        ++ +  C  A     +  + V  L   RYR  T I AYVEP++PLGDEED IL  DYVPTTI+PP F     VP VGR QT RIPS G
Subjt:  FFEKHSCERATLSTTIDKLVVEWLV--RYRTGTHITAYVEPLFPLGDEEDCILLDDYVPTTIKPPLFPLDDYVPHVGRRQTVRIPSAG

A0A6J1DLB0 uncharacterized protein LOC1110219691.2e-2274.67Show/hide
Query:  SAFRSKDELQFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS
        S FRSKDEL+FKLA+F I +N EY+VKKST KLL VAC E GCKWALR RRIKG +TFLISTF E HSCER+TL+
Subjt:  SAFRSKDELQFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS

A0A6J1DSY0 uncharacterized protein LOC1110236351.8e-1336.55Show/hide
Query:  YCPSSILLDEVEGEDDEDHE-YKMVGDAPIDDLEDDDYLETENDDDNEVDEPVCDGNSSSRTPVGSTVFSSAFRSKDELQFKLAIFTIKRNLEYRVKKST
        Y    +L +  E E    HE + + G+AP   +E+      +N         +  GN S    +G       FRSK+EL+FKL++  +K N +++VKKST
Subjt:  YCPSSILLDEVEGEDDEDHE-YKMVGDAPIDDLEDDDYLETENDDDNEVDEPVCDGNSSSRTPVGSTVFSSAFRSKDELQFKLAIFTIKRNLEYRVKKST

Query:  MKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS
          L  V C E+GCKW LRA+ I+G D+F+IS F + H C+R  L+
Subjt:  MKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLS

A0A6J1DU12 protein FAR-RED ELONGATED HYPOCOTYL 3-like1.3e-1150Show/hide
Query:  KGFDTFLISTFFEKHSCERATLSTTIDKLVVEWLV--RYRTGTHITAYVEPLFPLGDEEDCILLDDYVPTTIKPPLFPLDDYVPHVGRRQTVRIPSAG
        K FD F I       +C  A        + V  L   RY+  T I  Y EP++PLGDEED IL DDYVP TIKPP F     VP VGR QT RIPSAG
Subjt:  KGFDTFLISTFFEKHSCERATLSTTIDKLVVEWLV--RYRTGTHITAYVEPLFPLGDEEDCILLDDYVPTTIKPPLFPLDDYVPHVGRRQTVRIPSAG

A0A6J1DU12 protein FAR-RED ELONGATED HYPOCOTYL 3-like5.5e-1556.76Show/hide
Query:  SAFRSKDELQFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL
        S FRSK+ELQFKL++F ++ N EY VKKST  L  + C E GCKW+   R+I+G D FLISTF+E HSC R  +
Subjt:  SAFRSKDELQFKLAIFTIKRNLEYRVKKSTMKLLFVACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTCCCCTACATACTGTCCATCCTCCATCTTATTGGATGAGGTTGAAGGTGAGGATGATGAGGACCATGAGTACAAGATGGTTGGGGATGCTCCTATTGACGATCT
TGAGGATGATGATTACTTAGAAACTGAGAATGATGATGATAATGAAGTTGATGAACCAGTTTGTGATGGTAATTCATCATCAAGAACACCCGTTGGAAGTACAGTCTTTA
GCAGTGCTTTTCGGTCTAAGGATGAATTACAATTTAAATTGGCCATTTTCACCATCAAAAGGAATTTAGAGTATCGGGTTAAGAAATCTACTATGAAACTATTATTTGTT
GCATGCAAAGAAAAGGGATGCAAATGGGCTTTACGTGCAAGAAGAATTAAAGGTTTTGATACCTTCCTCATCTCAACGTTTTTCGAGAAGCACAGTTGCGAACGAGCGAC
ACTGAGCACGACCATCGATAAGTTGGTAGTTGAGTGGTTAGTCAGATACCGAACAGGTACCCATATAACTGCTTATGTTGAACCCTTGTTCCCACTTGGAGATGAGGAAG
ATTGTATTTTACTGGATGACTATGTGCCAACGACAATTAAGCCACCCTTGTTCCCACTAGATGACTATGTTCCTCATGTTGGACGTCGCCAAACTGTCAGAATACCTTCA
GCCGGAGTCCCATATCACGATCTCTCATTCCTCGAAGTCGATACAGACCATAACCCAATGGTTGCCCACGATGTTGAAGGGGAGATATACAACATCCACTTCCCTCCACC
ACAAAGGGTAGTCCGTATGCGTGTCATCAGTGTAAATAATGATGGTTTTGTCCCTCCCGTCCCAATCATACTCGGTCGCCACTCTCGAGGGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTCCCCTACATACTGTCCATCCTCCATCTTATTGGATGAGGTTGAAGGTGAGGATGATGAGGACCATGAGTACAAGATGGTTGGGGATGCTCCTATTGACGATCT
TGAGGATGATGATTACTTAGAAACTGAGAATGATGATGATAATGAAGTTGATGAACCAGTTTGTGATGGTAATTCATCATCAAGAACACCCGTTGGAAGTACAGTCTTTA
GCAGTGCTTTTCGGTCTAAGGATGAATTACAATTTAAATTGGCCATTTTCACCATCAAAAGGAATTTAGAGTATCGGGTTAAGAAATCTACTATGAAACTATTATTTGTT
GCATGCAAAGAAAAGGGATGCAAATGGGCTTTACGTGCAAGAAGAATTAAAGGTTTTGATACCTTCCTCATCTCAACGTTTTTCGAGAAGCACAGTTGCGAACGAGCGAC
ACTGAGCACGACCATCGATAAGTTGGTAGTTGAGTGGTTAGTCAGATACCGAACAGGTACCCATATAACTGCTTATGTTGAACCCTTGTTCCCACTTGGAGATGAGGAAG
ATTGTATTTTACTGGATGACTATGTGCCAACGACAATTAAGCCACCCTTGTTCCCACTAGATGACTATGTTCCTCATGTTGGACGTCGCCAAACTGTCAGAATACCTTCA
GCCGGAGTCCCATATCACGATCTCTCATTCCTCGAAGTCGATACAGACCATAACCCAATGGTTGCCCACGATGTTGAAGGGGAGATATACAACATCCACTTCCCTCCACC
ACAAAGGGTAGTCCGTATGCGTGTCATCAGTGTAAATAATGATGGTTTTGTCCCTCCCGTCCCAATCATACTCGGTCGCCACTCTCGAGGGCAATGA
Protein sequenceShow/hide protein sequence
MHSPTYCPSSILLDEVEGEDDEDHEYKMVGDAPIDDLEDDDYLETENDDDNEVDEPVCDGNSSSRTPVGSTVFSSAFRSKDELQFKLAIFTIKRNLEYRVKKSTMKLLFV
ACKEKGCKWALRARRIKGFDTFLISTFFEKHSCERATLSTTIDKLVVEWLVRYRTGTHITAYVEPLFPLGDEEDCILLDDYVPTTIKPPLFPLDDYVPHVGRRQTVRIPS
AGVPYHDLSFLEVDTDHNPMVAHDVEGEIYNIHFPPPQRVVRMRVISVNNDGFVPPVPIILGRHSRGQ