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Moc08g30990 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g30990
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:22225553..22230399
RNA-Seq ExpressionMoc08g30990
SyntenyMoc08g30990
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150385.1 uncharacterized protein LOC111018561 [Momordica charantia]4.0e-1874.36Show/hide
Query:  RDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKES
        RD D R  + D+KKRASR PE S SYSREFSN DLK+QSKYKPLT E VITREEFDLMKHRFDEQVEALK R ++ E+
Subjt:  RDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKES

XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]3.9e-1352.69Show/hide
Query:  EGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKESSFDDGDLG
        E  +Y+ +  DLR+HL  K+  + R  +   S S    N + +++S Y P+T E VITREEFD +K +FD QVEALKA+CEKKESSFDDGDLG
Subjt:  EGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKESSFDDGDLG

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]1.3e-3773.11Show/hide
Query:  ALGMPGEKEDQDPSLHPDDHEPVANNEGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVE
        A G PGEK    PS+ P D EP+ N+ G+DYSLRDND+RKHL +KKKRASR PE SLSYSR+FSN +LK+QSKYKPL  E +ITREEFDLMKH+F EQVE
Subjt:  ALGMPGEKEDQDPSLHPDDHEPVANNEGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVE

Query:  ALKARCEKKESSFDDGDLG
        ALKARCEKKE SFD+GDLG
Subjt:  ALKARCEKKESSFDDGDLG

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]2.7e-3876.92Show/hide
Query:  GMPGEKEDQDPSLHPDDHEPVANNEGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEAL
        G PGEK    PS+ P + EP+ N+EGVDYSLRDNDLRKHL DKKK+AS  PE SLSYSREFSN +LK+QSKYKPL  E VI REEFDLMKHRFDEQVEAL
Subjt:  GMPGEKEDQDPSLHPDDHEPVANNEGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEAL

Query:  KARCEKKESSFDDGDLG
        KARCEKKES FDD DLG
Subjt:  KARCEKKESSFDDGDLG

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]1.2e-2284.72Show/hide
Query:  RASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKESSFDDGDLG
        RASR  E S SYSREFSN D K+QSKYKPLT E VITREEFDLMKHRFDEQVEALKA+CEKKE SFDDGDLG
Subjt:  RASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKESSFDDGDLG

TrEMBL top hitse value%identityAlignment
A0A6J1D8C0 uncharacterized protein LOC1110185612.0e-1874.36Show/hide
Query:  RDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKES
        RD D R  + D+KKRASR PE S SYSREFSN DLK+QSKYKPLT E VITREEFDLMKHRFDEQVEALK R ++ E+
Subjt:  RDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKES

A0A6J1DDW5 uncharacterized protein LOC1110196341.9e-1352.69Show/hide
Query:  EGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKESSFDDGDLG
        E  +Y+ +  DLR+HL  K+  + R  +   S S    N + +++S Y P+T E VITREEFD +K +FD QVEALKA+CEKKESSFDDGDLG
Subjt:  EGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKESSFDDGDLG

A0A6J1DNM4 Ribonuclease H6.4e-3873.11Show/hide
Query:  ALGMPGEKEDQDPSLHPDDHEPVANNEGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVE
        A G PGEK    PS+ P D EP+ N+ G+DYSLRDND+RKHL +KKKRASR PE SLSYSR+FSN +LK+QSKYKPL  E +ITREEFDLMKH+F EQVE
Subjt:  ALGMPGEKEDQDPSLHPDDHEPVANNEGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVE

Query:  ALKARCEKKESSFDDGDLG
        ALKARCEKKE SFD+GDLG
Subjt:  ALKARCEKKESSFDDGDLG

A0A6J1DPC9 uncharacterized protein LOC1110222801.3e-3876.92Show/hide
Query:  GMPGEKEDQDPSLHPDDHEPVANNEGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEAL
        G PGEK    PS+ P + EP+ N+EGVDYSLRDNDLRKHL DKKK+AS  PE SLSYSREFSN +LK+QSKYKPL  E VI REEFDLMKHRFDEQVEAL
Subjt:  GMPGEKEDQDPSLHPDDHEPVANNEGVDYSLRDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEAL

Query:  KARCEKKESSFDDGDLG
        KARCEKKES FDD DLG
Subjt:  KARCEKKESSFDDGDLG

A0A6J1DVR0 uncharacterized protein LOC1110245035.9e-2384.72Show/hide
Query:  RASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKESSFDDGDLG
        RASR  E S SYSREFSN D K+QSKYKPLT E VITREEFDLMKHRFDEQVEALKA+CEKKE SFDDGDLG
Subjt:  RASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKESSFDDGDLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGCCACAGTCATCGTCTTTCTCATGAAGCAGATCTGCAAGCCGCGATCCCGCCACTCACCTTCAAGGCCACCATCCCGTCCCGCTGCTCACCTCATGAAGCATAT
CCGTGCGCCGCTCACCTTCACGCCGTCGTCCACGAACCAAAACCAGACCCGACCCGTCGCCGCCGCACCCAACCGCCACCACCCTCCCCGCTGGCTACAACACGTACCAT
ATCTGCTTGATGCACCACATCCCAAACCAGATCTACCGTCCCGCCACCCGATTAGATCCGCCCAAGGCCGATACGATCCGCCGTACACCCCATACCAGATCCACCTACTG
CCGCTTCGATATGTTTCTGATCTGCCGCCCAACTTCCATCTTCTAGCATCTGTTCGAGGAAGGTTCACTCCTAAGTTCAGGTCGAGCCGAAGAATGGGTTCAAGCTTGGA
TGGTCGAGGATTAAGTCCGAGCAGGATAAGAGGGAGATCTGCCACGGAGATCTACCCGCCATGCGAATCAGGAGTTACCTCCTGCTCACCCGAAACCTTCAAAGGCCAAC
CGAGGCCGAGAGCCCTAGGCATGCCCGGGGAGAAGGAGGACCAAGATCCGTCTCTCCACCCTGATGATCACGAACCCGTAGCCAACAACGAAGGGGTGGATTATAGCTTG
CGGGACAATGATCTTAGAAAGCACCTTGCTGATAAAAAGAAGAGAGCATCGCGAGGACCGGAGGTCTCTCTGTCTTACTCCCGAGAGTTCTCCAACTTCGACCTCAAGTC
TCAATCAAAGTACAAGCCTTTAACACAAGAAACTGTGATCACTAGGGAAGAGTTCGACCTGATGAAGCACAGGTTCGACGAACAGGTCGAGGCGCTTAAGGCTAGGTGCG
AGAAGAAAGAGAGCTCGTTTGACGATGGCGACTTGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCACGCCACAGTCATCGTCTTTCTCATGAAGCAGATCTGCAAGCCGCGATCCCGCCACTCACCTTCAAGGCCACCATCCCGTCCCGCTGCTCACCTCATGAAGCATAT
CCGTGCGCCGCTCACCTTCACGCCGTCGTCCACGAACCAAAACCAGACCCGACCCGTCGCCGCCGCACCCAACCGCCACCACCCTCCCCGCTGGCTACAACACGTACCAT
ATCTGCTTGATGCACCACATCCCAAACCAGATCTACCGTCCCGCCACCCGATTAGATCCGCCCAAGGCCGATACGATCCGCCGTACACCCCATACCAGATCCACCTACTG
CCGCTTCGATATGTTTCTGATCTGCCGCCCAACTTCCATCTTCTAGCATCTGTTCGAGGAAGGTTCACTCCTAAGTTCAGGTCGAGCCGAAGAATGGGTTCAAGCTTGGA
TGGTCGAGGATTAAGTCCGAGCAGGATAAGAGGGAGATCTGCCACGGAGATCTACCCGCCATGCGAATCAGGAGTTACCTCCTGCTCACCCGAAACCTTCAAAGGCCAAC
CGAGGCCGAGAGCCCTAGGCATGCCCGGGGAGAAGGAGGACCAAGATCCGTCTCTCCACCCTGATGATCACGAACCCGTAGCCAACAACGAAGGGGTGGATTATAGCTTG
CGGGACAATGATCTTAGAAAGCACCTTGCTGATAAAAAGAAGAGAGCATCGCGAGGACCGGAGGTCTCTCTGTCTTACTCCCGAGAGTTCTCCAACTTCGACCTCAAGTC
TCAATCAAAGTACAAGCCTTTAACACAAGAAACTGTGATCACTAGGGAAGAGTTCGACCTGATGAAGCACAGGTTCGACGAACAGGTCGAGGCGCTTAAGGCTAGGTGCG
AGAAGAAAGAGAGCTCGTTTGACGATGGCGACTTGGGATAA
Protein sequenceShow/hide protein sequence
MHATVIVFLMKQICKPRSRHSPSRPPSRPAAHLMKHIRAPLTFTPSSTNQNQTRPVAAAPNRHHPPRWLQHVPYLLDAPHPKPDLPSRHPIRSAQGRYDPPYTPYQIHLL
PLRYVSDLPPNFHLLASVRGRFTPKFRSSRRMGSSLDGRGLSPSRIRGRSATEIYPPCESGVTSCSPETFKGQPRPRALGMPGEKEDQDPSLHPDDHEPVANNEGVDYSL
RDNDLRKHLADKKKRASRGPEVSLSYSREFSNFDLKSQSKYKPLTQETVITREEFDLMKHRFDEQVEALKARCEKKESSFDDGDLG