; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g31010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g31010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:22231397..22234259
RNA-Seq ExpressionMoc08g31010
SyntenyMoc08g31010
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150861.1 uncharacterized protein LOC111018906 [Momordica charantia]3.0e-10482.99Show/hide
Query:  EAQVGGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPL
        E   GGQSGNKRK+LAR+AR EVCIIREQK TCSI   D+D EG+HLPHNDALVI PLIDHVLVRRVLVDGGAS NILSL TYLALGWTRSQLKKSP PL
Subjt:  EAQVGGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPL

Query:  VGFSGESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLE
        VGFSGE VSPEGCIDLPV I QD+T+VTQMAEFVVI GRSAYNAIFGRPIIHSFRAV STLHQVLKYSTPNGVGTVRGEQKTSRECYASA KGSSV  LE
Subjt:  VGFSGESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLE

Query:  GQTNWDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ
         Q +WDEL + EA+L +  KREFSAPTE LELVPLLSP++Q
Subjt:  GQTNWDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ

XP_022152110.1 uncharacterized protein LOC111019899 [Momordica charantia]5.0e-9980.59Show/hide
Query:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS
        GGQSG+KRKKLAR AR EVCIIREQ+ TC I  D +D   +HLPHNDALVI PLIDHV+VRRVLVDGGAS NILSLPTYLALGWTRSQLKKSP PLVGFS
Subjt:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS

Query:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN
        GESV PEGCIDLPVT+ QD TRVTQMAEFVV+DGRSAYNAIFGRPIIHSFRA+PSTLHQVLKYSTPNGVGTVRGEQ  SRECYAS  KG+SVC LE  T+
Subjt:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN

Query:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ
         D   E EADLP    REF+AP E+LELVPLLS EKQ
Subjt:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]1.2e-10079.42Show/hide
Query:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS
        GGQ GNKR KLAR  R EVCIIREQK TC I   D+D EG+HLPHNDALVI PLIDH+LVRRVL+DGGAS NI SLPTYLALGWTRSQLKKSP PLVGFS
Subjt:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS

Query:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN
        GESVSPEGCIDL VTI QD T+VTQMAEFVVID +SAYNAIFGRPIIHSF AV STLHQVLKYST NGVGTVRGEQKTSR+CYAS  KG +VC LE QTN
Subjt:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN

Query:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQEEYQTK
          +LQ SEADLP++ KR+FS PTE+LELVPLLSPEK     TK
Subjt:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQEEYQTK

XP_022155866.1 uncharacterized protein LOC111022880 [Momordica charantia]2.9e-9477.22Show/hide
Query:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS
        GGQSG+KRK+LAR AR EVCIIREQ  TC I  D +D E +HLPHNDAL+I  LIDHV+VRRVLV+GGAS NILSLPTYLALGWTRSQL++SP PLVGFS
Subjt:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS

Query:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN
        GESV PEGCIDLPVT+ Q+ TR+TQMAEFVV+DGRS YNAIFGRPIIHSFRA+PSTLHQVLKY TPNGVGTVRGEQ  SRECYA+A KG SVC LE  T 
Subjt:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN

Query:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ
         D   E EA+LPR   +EF+APTE+LELVPLLSPEKQ
Subjt:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ

XP_022157676.1 uncharacterized protein LOC111024332 [Momordica charantia]1.9e-9879.83Show/hide
Query:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS
        GGQSG+KRK+LAR+AR EVCIIREQ  TC I  D +D E +HLPHNDALVI PLIDHV+VRRVLVDGGAS NILSLPTYLALGWTRSQLK+SP PLVGFS
Subjt:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS

Query:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN
        GESV PEGCIDLPVT+ QD TRVTQM EFVV+DGRS YNAIFGRPIIHSFR +PSTLHQVLKYSTPNGVGTVRGEQ  SRECYA+A KGSSVC LE  T 
Subjt:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN

Query:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQE
         D   E EADLPR   +EF+APTE+LELVPLLSPEKQ+
Subjt:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQE

TrEMBL top hitse value%identityAlignment
A0A6J1DCR3 uncharacterized protein LOC1110189061.5e-10482.99Show/hide
Query:  EAQVGGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPL
        E   GGQSGNKRK+LAR+AR EVCIIREQK TCSI   D+D EG+HLPHNDALVI PLIDHVLVRRVLVDGGAS NILSL TYLALGWTRSQLKKSP PL
Subjt:  EAQVGGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPL

Query:  VGFSGESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLE
        VGFSGE VSPEGCIDLPV I QD+T+VTQMAEFVVI GRSAYNAIFGRPIIHSFRAV STLHQVLKYSTPNGVGTVRGEQKTSRECYASA KGSSV  LE
Subjt:  VGFSGESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLE

Query:  GQTNWDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ
         Q +WDEL + EA+L +  KREFSAPTE LELVPLLSP++Q
Subjt:  GQTNWDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ

A0A6J1DD03 uncharacterized protein LOC1110198992.4e-9980.59Show/hide
Query:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS
        GGQSG+KRKKLAR AR EVCIIREQ+ TC I  D +D   +HLPHNDALVI PLIDHV+VRRVLVDGGAS NILSLPTYLALGWTRSQLKKSP PLVGFS
Subjt:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS

Query:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN
        GESV PEGCIDLPVT+ QD TRVTQMAEFVV+DGRSAYNAIFGRPIIHSFRA+PSTLHQVLKYSTPNGVGTVRGEQ  SRECYAS  KG+SVC LE  T+
Subjt:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN

Query:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ
         D   E EADLP    REF+AP E+LELVPLLS EKQ
Subjt:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ

A0A6J1DPX9 uncharacterized protein LOC1110220065.8e-10179.42Show/hide
Query:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS
        GGQ GNKR KLAR  R EVCIIREQK TC I   D+D EG+HLPHNDALVI PLIDH+LVRRVL+DGGAS NI SLPTYLALGWTRSQLKKSP PLVGFS
Subjt:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS

Query:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN
        GESVSPEGCIDL VTI QD T+VTQMAEFVVID +SAYNAIFGRPIIHSF AV STLHQVLKYST NGVGTVRGEQKTSR+CYAS  KG +VC LE QTN
Subjt:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN

Query:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQEEYQTK
          +LQ SEADLP++ KR+FS PTE+LELVPLLSPEK     TK
Subjt:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQEEYQTK

A0A6J1DT04 uncharacterized protein LOC1110228801.4e-9477.22Show/hide
Query:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS
        GGQSG+KRK+LAR AR EVCIIREQ  TC I  D +D E +HLPHNDAL+I  LIDHV+VRRVLV+GGAS NILSLPTYLALGWTRSQL++SP PLVGFS
Subjt:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS

Query:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN
        GESV PEGCIDLPVT+ Q+ TR+TQMAEFVV+DGRS YNAIFGRPIIHSFRA+PSTLHQVLKY TPNGVGTVRGEQ  SRECYA+A KG SVC LE  T 
Subjt:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN

Query:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ
         D   E EA+LPR   +EF+APTE+LELVPLLSPEKQ
Subjt:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQ

A0A6J1DYW5 uncharacterized protein LOC1110243329.3e-9979.83Show/hide
Query:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS
        GGQSG+KRK+LAR+AR EVCIIREQ  TC I  D +D E +HLPHNDALVI PLIDHV+VRRVLVDGGAS NILSLPTYLALGWTRSQLK+SP PLVGFS
Subjt:  GGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMPLVGFS

Query:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN
        GESV PEGCIDLPVT+ QD TRVTQM EFVV+DGRS YNAIFGRPIIHSFR +PSTLHQVLKYSTPNGVGTVRGEQ  SRECYA+A KGSSVC LE  T 
Subjt:  GESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTN

Query:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQE
         D   E EADLPR   +EF+APTE+LELVPLLSPEKQ+
Subjt:  WDELQESEADLPREGKREFSAPTEDLELVPLLSPEKQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGACCTACGGTCATCAATACTATTTTCGGAGGCCCAAGTGGGGGGCCAATCCGGAAATAAAAGGAAGAAGTTAGCTCGTAAAGCCAGGTGCGAGGTGTGCATCAT
TAGGGAACAGAAATCGACCTGCTCCATTATTTTAGATGATTCTGACTGGGAGGGAATCCACTTGCCCCATAATGACGCACTCGTGATAACCCCTCTCATCGATCATGTCT
TGGTCCGAAGAGTCTTGGTAGATGGAGGTGCATCTGTCAACATTCTATCCCTTCCAACATATCTCGCTCTTGGGTGGACCAGGTCACAATTGAAAAAAAGTCCAATGCCC
TTGGTTGGATTCTCTGGAGAATCAGTCTCCCCAGAAGGGTGTATTGACTTGCCGGTCACAATCGAGCAAGATAATACACGGGTTACACAGATGGCCGAGTTCGTTGTGAT
CGACGGTAGGTCGGCCTACAATGCCATCTTTGGGAGACCCATCATCCACTCATTCCGAGCCGTTCCCTCAACGCTTCATCAAGTCTTGAAATACTCAACTCCCAATGGAG
TGGGCACGGTCCGAGGAGAGCAGAAGACTTCAAGAGAGTGCTATGCCTCCGCACGCAAAGGGTCATCCGTATGCGTCTTGGAAGGACAAACCAACTGGGACGAGCTGCAA
GAGTCCGAGGCTGACCTACCTAGAGAAGGCAAAAGGGAGTTCTCTGCACCAACAGAGGATCTCGAGCTTGTTCCTTTGCTTAGCCCTGAAAAACAAGAGGAGTATCAAAC
AAAAGACTCCCGGATGGAAAAGTATTTAAGTAAACTCAGATCGCACCTCGCCCAGTTCAAAACTTATGAGGTGAATCAAGTTCCAAGATCAGAGAATTCAAACGCAGATG
CCTTAGCCAAATTGGCGTTGGCATACGAGACCGATCTCAGCTCGGTTCGTACTCCGGGACGAAGCATTATACTTACGTGGATTCTCCCTGCCTCTGCTCAAGTGTGTGAC
TCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGACCTACGGTCATCAATACTATTTTCGGAGGCCCAAGTGGGGGGCCAATCCGGAAATAAAAGGAAGAAGTTAGCTCGTAAAGCCAGGTGCGAGGTGTGCATCAT
TAGGGAACAGAAATCGACCTGCTCCATTATTTTAGATGATTCTGACTGGGAGGGAATCCACTTGCCCCATAATGACGCACTCGTGATAACCCCTCTCATCGATCATGTCT
TGGTCCGAAGAGTCTTGGTAGATGGAGGTGCATCTGTCAACATTCTATCCCTTCCAACATATCTCGCTCTTGGGTGGACCAGGTCACAATTGAAAAAAAGTCCAATGCCC
TTGGTTGGATTCTCTGGAGAATCAGTCTCCCCAGAAGGGTGTATTGACTTGCCGGTCACAATCGAGCAAGATAATACACGGGTTACACAGATGGCCGAGTTCGTTGTGAT
CGACGGTAGGTCGGCCTACAATGCCATCTTTGGGAGACCCATCATCCACTCATTCCGAGCCGTTCCCTCAACGCTTCATCAAGTCTTGAAATACTCAACTCCCAATGGAG
TGGGCACGGTCCGAGGAGAGCAGAAGACTTCAAGAGAGTGCTATGCCTCCGCACGCAAAGGGTCATCCGTATGCGTCTTGGAAGGACAAACCAACTGGGACGAGCTGCAA
GAGTCCGAGGCTGACCTACCTAGAGAAGGCAAAAGGGAGTTCTCTGCACCAACAGAGGATCTCGAGCTTGTTCCTTTGCTTAGCCCTGAAAAACAAGAGGAGTATCAAAC
AAAAGACTCCCGGATGGAAAAGTATTTAAGTAAACTCAGATCGCACCTCGCCCAGTTCAAAACTTATGAGGTGAATCAAGTTCCAAGATCAGAGAATTCAAACGCAGATG
CCTTAGCCAAATTGGCGTTGGCATACGAGACCGATCTCAGCTCGGTTCGTACTCCGGGACGAAGCATTATACTTACGTGGATTCTCCCTGCCTCTGCTCAAGTGTGTGAC
TCTTGA
Protein sequenceShow/hide protein sequence
MTDLRSSILFSEAQVGGQSGNKRKKLARKARCEVCIIREQKSTCSIILDDSDWEGIHLPHNDALVITPLIDHVLVRRVLVDGGASVNILSLPTYLALGWTRSQLKKSPMP
LVGFSGESVSPEGCIDLPVTIEQDNTRVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAVPSTLHQVLKYSTPNGVGTVRGEQKTSRECYASARKGSSVCVLEGQTNWDELQ
ESEADLPREGKREFSAPTEDLELVPLLSPEKQEEYQTKDSRMEKYLSKLRSHLAQFKTYEVNQVPRSENSNADALAKLALAYETDLSSVRTPGRSIILTWILPASAQVCD
S