; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g31280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g31280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Genome locationchr8:22413019..22422632
RNA-Seq ExpressionMoc08g31280
SyntenyMoc08g31280
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599033.1 hypothetical protein SDJN03_08811, partial [Cucurbita argyrosperma subsp. sororia]5.0e-6544.68Show/hide
Query:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI
        F  +TSINGC FN YW SSFH+  LK   LDS+CSRF L  YSSRK+ KG+S     D+KP  MEP+ GDFFVVRKGD V VYK+ +D QA+IGSS    
Subjt:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI

Query:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKL-----LTWLPQRSDQEKLLYQKMLSKCLQR---STVVASTPKDALTKHGP
         C + +SVYKGHSLPKDT EYL+SVGLKNALYTIK ADMR +L  S V        T L   +  +  + ++     +     STV+  T KD L KH  
Subjt:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKL-----LTWLPQRSDQEKLLYQKMLSKCLQR---STVVASTPKDALTKHGP

Query:  KKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRV
         +D                                  ++ +  P++   C                                                  
Subjt:  KKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRV

Query:  PLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
         LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLKYAL+KGFTRIHVQ +    C++
Subjt:  PLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

XP_008465685.1 PREDICTED: uncharacterized protein LOC103503315 isoform X4 [Cucumis melo]2.1e-6344.04Show/hide
Query:  FSKEPAFFLPTTSINGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSS---RKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQA
        F +    F  +TSI+GC NPYW S+FHN A+K  ALDS+CSRF L  YS+   RK  K +S   K D++P  ME E GDFFVVRKGD V VYK+ SD  A
Subjt:  FSKEPAFFLPTTSINGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSS---RKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQA

Query:  EIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHG
        +IGSS     C + +SV+KGHSLPKD+EEYLAS+GLKNALYTIK ADMR +L  S V                                           
Subjt:  EIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHG

Query:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGT-VASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLV
               F D    +  E      I        KR   AI +    S+V+  T V   + D    H K        SSN                     
Subjt:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGT-VASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLV

Query:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLRPPLMVASI
           LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLK+AL+KGFTRIHVQ +    C++ P+++  +
Subjt:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLRPPLMVASI

XP_022946833.1 uncharacterized protein LOC111450776 [Cucurbita moschata]2.5e-6445.09Show/hide
Query:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI
        F  +TSI+GC FN YW SSFH+  LK   LDS+CSRF L  YSSRK+ KG+S     D+KP  MEP+ GDFFVVRKGD V VYK+ +D QA+IGSS    
Subjt:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI

Query:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKV------KLLTWLPQRSDQE---KLLYQKMLSKCLQRSTVVASTPKDALTKHG
         C + +SVYKGHSLPKDT EYL+SVGLKNALYTIK ADMR +L  S V      +  T   + S Q+   K   + ++S+ +  STV+  T KD L KH 
Subjt:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKV------KLLTWLPQRSDQE---KLLYQKMLSKCLQRSTVVASTPKDALTKHG

Query:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVR
          +D                                  ++ +  P++   C                                                 
Subjt:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVR

Query:  VPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
          LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLKYAL+KGFTRIHVQ +    C++
Subjt:  VPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

XP_022999715.1 uncharacterized protein LOC111493983 [Cucurbita maxima]1.9e-6444.56Show/hide
Query:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI
        F  +TSI+GC FNPYW SS H+  LK   LDS+CSRF L  YSSRK+ KG+S     D++P  MEP+ GDFFVVRKGD V VY++ +D QA+IGSS    
Subjt:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI

Query:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKV------KLLTWLPQRSDQE---KLLYQKMLSKCLQRSTVVASTPKDALTKHG
         C + +SVYKGHSLPKDT+EYLASVGLKNALYTI+ ADMR +L  S V      +  +   + S Q+   K   + ++SK +  STV+  T KD L KH 
Subjt:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKV------KLLTWLPQRSDQE---KLLYQKMLSKCLQRSTVVASTPKDALTKHG

Query:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVR
          +D                                  ++ +  P++   C                                                 
Subjt:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVR

Query:  VPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
          LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLKYAL+KGFTRIHVQ +    C++
Subjt:  VPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

XP_023547239.1 uncharacterized protein LOC111806115 [Cucurbita pepo subsp. pepo]7.8e-6644.95Show/hide
Query:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI
        F  +TSI+GC FNPYW SSFH+  LK   LDS+CSRF L  YSSRK+ KG+S     D+KP  MEP+ GDFFVVRKGD V VYK+ +D QA+IGSS    
Subjt:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI

Query:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKL-----LTWLPQRSDQEKLLYQKMLSKCLQR---STVVASTPKDALTKHGP
         C + +SVYKGHSLPKDT EYLASVGLKNALYTIK ADMR +L  S V        T L   +  +  + ++     +     STV+  T KD L KH  
Subjt:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKL-----LTWLPQRSDQEKLLYQKMLSKCLQR---STVVASTPKDALTKHGP

Query:  KKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRV
         +D                                  ++ +  P++   C                                                  
Subjt:  KKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRV

Query:  PLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
         LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLKYAL+KGFTRIHVQ +    C++
Subjt:  PLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ9 RNase H domain-containing protein3.9e-6345.77Show/hide
Query:  FSKEPAFFLPTTSINGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSS---RKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQA
        F +    F  +TSI+GC N YW SSFHN A+K  ALDS+CSRF L  YS+   RK  K +S   K D++P  +E E GDFFVVRKGD V VYK+ SD QA
Subjt:  FSKEPAFFLPTTSINGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSS---RKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQA

Query:  EIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHG
        +IGSS     C + +SV+KGHSLPKDTEEYLASVGLKNALYTIK ADMR +L  S                      L+ C               T HG
Subjt:  EIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHG

Query:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVAS-VNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLV
                          + +L G +       KR   AI      S V+  T+       IKL+ +  +  H VSS+                      
Subjt:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVAS-VNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLV

Query:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
           LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLK AL+KGFTRIHVQ +    C++
Subjt:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

A0A1S3CPE1 uncharacterized protein LOC103503315 isoform X41.0e-6344.04Show/hide
Query:  FSKEPAFFLPTTSINGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSS---RKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQA
        F +    F  +TSI+GC NPYW S+FHN A+K  ALDS+CSRF L  YS+   RK  K +S   K D++P  ME E GDFFVVRKGD V VYK+ SD  A
Subjt:  FSKEPAFFLPTTSINGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSS---RKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQA

Query:  EIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHG
        +IGSS     C + +SV+KGHSLPKD+EEYLAS+GLKNALYTIK ADMR +L  S V                                           
Subjt:  EIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHG

Query:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGT-VASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLV
               F D    +  E      I        KR   AI +    S+V+  T V   + D    H K        SSN                     
Subjt:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGT-VASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLV

Query:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLRPPLMVASI
           LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLK+AL+KGFTRIHVQ +    C++ P+++  +
Subjt:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLRPPLMVASI

A0A5A7TCE2 RNase H family protein, putative isoform 28.7e-6344.71Show/hide
Query:  FSKEPAFFLPTTSINGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSS---RKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQA
        F +    F  +TSI+GC NPYW S+FHN A+K  ALDS+CSRF L  YS+   RK  K +S   K D++P  ME E GDFFVVRKGD V VYK+ SD  A
Subjt:  FSKEPAFFLPTTSINGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSS---RKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQA

Query:  EIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHG
        +IGSS     C + +SV+KGHSLPKD+EEYLAS+GLKNALYTIK ADMR +L  S V                                           
Subjt:  EIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHG

Query:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGT-VASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLV
               F D    +  E      I        KR   AI +    S+V+  T V   + D    H K        SSN                     
Subjt:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGT-VASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLV

Query:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
           LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLK+AL+KGFTRIHVQ +    C++
Subjt:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

A0A6J1G4Y7 uncharacterized protein LOC1114507761.2e-6445.09Show/hide
Query:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI
        F  +TSI+GC FN YW SSFH+  LK   LDS+CSRF L  YSSRK+ KG+S     D+KP  MEP+ GDFFVVRKGD V VYK+ +D QA+IGSS    
Subjt:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI

Query:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKV------KLLTWLPQRSDQE---KLLYQKMLSKCLQRSTVVASTPKDALTKHG
         C + +SVYKGHSLPKDT EYL+SVGLKNALYTIK ADMR +L  S V      +  T   + S Q+   K   + ++S+ +  STV+  T KD L KH 
Subjt:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKV------KLLTWLPQRSDQE---KLLYQKMLSKCLQRSTVVASTPKDALTKHG

Query:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVR
          +D                                  ++ +  P++   C                                                 
Subjt:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVR

Query:  VPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
          LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLKYAL+KGFTRIHVQ +    C++
Subjt:  VPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

A0A6J1KGD7 uncharacterized protein LOC1114939839.3e-6544.56Show/hide
Query:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI
        F  +TSI+GC FNPYW SS H+  LK   LDS+CSRF L  YSSRK+ KG+S     D++P  MEP+ GDFFVVRKGD V VY++ +D QA+IGSS    
Subjt:  FLPTTSINGC-FNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQI

Query:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKV------KLLTWLPQRSDQE---KLLYQKMLSKCLQRSTVVASTPKDALTKHG
         C + +SVYKGHSLPKDT+EYLASVGLKNALYTI+ ADMR +L  S V      +  +   + S Q+   K   + ++SK +  STV+  T KD L KH 
Subjt:  YCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKV------KLLTWLPQRSDQE---KLLYQKMLSKCLQRSTVVASTPKDALTKHG

Query:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVR
          +D                                  ++ +  P++   C                                                 
Subjt:  PKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVR

Query:  VPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
          LEFDGA KGN GQAGAGAVLRAHDG VIC LREGLG ATNN+ EYRAILLGLKYAL+KGFTRIHVQ +    C++
Subjt:  VPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

SwissProt top hitse value%identityAlignment
P64956 Uncharacterized protein Mb2253c2.1e-0540Show/hide
Query:  VRVPLEFDGALKGNLGQAGAGAVL-RAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHV
        ++V +E DG  +GN G AG GAV+  A    V+   ++ +G ATNN+ EYR ++ GL  A++ G T   V
Subjt:  VRVPLEFDGALKGNLGQAGAGAVL-RAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHV

P9WLH4 Uncharacterized protein MT22872.1e-0540Show/hide
Query:  VRVPLEFDGALKGNLGQAGAGAVL-RAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHV
        ++V +E DG  +GN G AG GAV+  A    V+   ++ +G ATNN+ EYR ++ GL  A++ G T   V
Subjt:  VRVPLEFDGALKGNLGQAGAGAVL-RAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHV

P9WLH5 Bifunctional protein Rv2228c2.1e-0540Show/hide
Query:  VRVPLEFDGALKGNLGQAGAGAVL-RAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHV
        ++V +E DG  +GN G AG GAV+  A    V+   ++ +G ATNN+ EYR ++ GL  A++ G T   V
Subjt:  VRVPLEFDGALKGNLGQAGAGAVL-RAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHV

Q9HSF6 Ribonuclease HI6.1e-0540.58Show/hide
Query:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQ
        RV   FDGA +GN G A  G VL + DG ++    + +G ATNN  EY A++  L+ A   GF  I ++
Subjt:  RVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQ

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein1.4e-3632.66Show/hide
Query:  AALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLSVYKGHSLPKDTEEYL
        + LK  A+ SV     +H YSSR  A  S  L    T  S+++ EK  FFVVRKGD + +YK+ SD QA++GSS   +     +SVYKG+SLPKDTEEYL
Subjt:  AALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLSVYKGHSLPKDTEEYL

Query:  ASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHGPKKDLHLFWDRVLPVIREEFNLGGISFSLCF
        +SVGLK  LY+++ +D++ ++                         L+ CL +     +                      + V  +E            
Subjt:  ASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHGPKKDLHLFWDRVLPVIREEFNLGGISFSLCF

Query:  RFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQAGAGAVLRAHDGRVIC
                 TTSE  S            D K D        ++ S+++    ++K+  V     +      +EFDGA KGN G +GA AVL+  DG +IC
Subjt:  RFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQAGAGAVLRAHDGRVIC

Query:  ILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
         +R+GLG ATNN  EY A++LGLKYA++KG+  I V+ +    C++
Subjt:  ILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.6e-3031.6Show/hide
Query:  SSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQE
        S+ME EK  F++VRKGD + VY++ S+ Q + GSS         +SVYKG+  PK  E+ L+S G+KNAL+++  + ++ +                   
Subjt:  SSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQE

Query:  KLLYQKMLSKCLQRSTVVASTPKDALTKHGPKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVS
           + K++   +Q+    +S+  ++L K  P K L            ++   G            +S + + S P               +K++++    
Subjt:  KLLYQKMLSKCLQRSTVVASTPKDALTKHGPKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVS

Query:  MHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEE
        +  + SS L  + I++  N S           +EFDGA KGN G+AGAGAVLRA D  V+  LREG+G ATNN+ EYRA+LLGL+ AL KGF  +HV  +
Subjt:  MHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEE

Query:  PVFFCLR
         +  C++
Subjt:  PVFFCLR

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.6e-3031.6Show/hide
Query:  SSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQE
        S+ME EK  F++VRKGD + VY++ S+ Q + GSS         +SVYKG+  PK  E+ L+S G+KNAL+++  + ++ +                   
Subjt:  SSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQE

Query:  KLLYQKMLSKCLQRSTVVASTPKDALTKHGPKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVS
           + K++   +Q+    +S+  ++L K  P K L            ++   G            +S + + S P               +K++++    
Subjt:  KLLYQKMLSKCLQRSTVVASTPKDALTKHGPKKDLHLFWDRVLPVIREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVS

Query:  MHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEE
        +  + SS L  + I++  N S           +EFDGA KGN G+AGAGAVLRA D  V+  LREG+G ATNN+ EYRA+LLGL+ AL KGF  +HV  +
Subjt:  MHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQAGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEE

Query:  PVFFCLR
         +  C++
Subjt:  PVFFCLR

AT5G51080.1 RNase H family protein5.3e-2829.28Show/hide
Query:  NGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSR-KIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLS
        N CF    +SS   A++ V +         +H YSSR K AK  S++ K     S  + EK  FFVVRKGD V +YK+  D QA++GSS         +S
Subjt:  NGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSR-KIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLS

Query:  VYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCL-QRSTVVASTPKDALTKHGPKKDLHLFWDRVLPV
        VYKG+SL KDTEE L++VGLK  LY  +  D++ ++                         L+ CL Q     AS   + L +  P  D           
Subjt:  VYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCL-QRSTVVASTPKDALTKHGPKKDLHLFWDRVLPV

Query:  IREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQ
                  S+  C                                                                        +EFDGA KGN G 
Subjt:  IREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQ

Query:  AGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
        +GA AVL+  DG +I  +R+GLG ATNN  EY  ++LGLK+A++KG+T+I V+ +    C++
Subjt:  AGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR

AT5G51080.2 RNase H family protein5.3e-2829.28Show/hide
Query:  NGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSR-KIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLS
        N CF    +SS   A++ V +         +H YSSR K AK  S++ K     S  + EK  FFVVRKGD V +YK+  D QA++GSS         +S
Subjt:  NGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSR-KIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYCLIWLS

Query:  VYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCL-QRSTVVASTPKDALTKHGPKKDLHLFWDRVLPV
        VYKG+SL KDTEE L++VGLK  LY  +  D++ ++                         L+ CL Q     AS   + L +  P  D           
Subjt:  VYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCL-QRSTVVASTPKDALTKHGPKKDLHLFWDRVLPV

Query:  IREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQ
                  S+  C                                                                        +EFDGA KGN G 
Subjt:  IREEFNLGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQ

Query:  AGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR
        +GA AVL+  DG +I  +R+GLG ATNN  EY  ++LGLK+A++KG+T+I V+ +    C++
Subjt:  AGAGAVLRAHDGRVICILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTTCAAAAGAACCAGCGTTTTTTTTGCCTACGACCTCCATTAATGGCTGCTTCAATCCCTACTGGAGGTCAAGTTTTCACAATGCCGCTCTTAAGGTTGATGC
TTTAGATTCCGTGTGCTCCAGATTCCATCTGCACTACTATTCGTCCCGAAAAATCGCCAAGGGCAGTTCTCGTTTGCAGAAGTTTGATACTAAACCTTCTTCTATGGAAC
CGGAGAAGGGCGACTTCTTTGTTGTACGGAAGGGGGATGCTGTTGCAGTATATAAAAATTCTAGTGACTATCAGGCTGAAATTGGATCTTCGTCCCTGCAAATTTACTGC
CTAATCTGGTTGAGCGTGTATAAAGGACACTCATTGCCTAAAGACACTGAGGAATATCTTGCTTCCGTTGGGCTTAAGAATGCTCTGTACACTATTAAAGTTGCAGATAT
GAGGATGGAACTACTCCTCTCAAAGGTGAAGCTTCTGACCTGGCTGCCACAAAGAAGTGATCAAGAGAAGCTCTTGTATCAGAAAATGTTATCTAAATGTTTGCAGAGGT
CAACTGTTGTAGCTTCTACACCAAAAGATGCCTTGACGAAGCATGGACCAAAGAAAGACCTTCACCTTTTCTGGGATAGGGTCCTTCCAGTTATCAGAGAAGAATTTAAT
TTGGGAGGAATTTCCTTTAGCTTGTGCTTCAGGTTTAAGAGAAAGAGCATTGCTATCACAACTTCAGAACCTGCCAGCGCAGTAATCTGCGGAACTGTTGCATCTGTCAA
TTGGGATATCAAGTTAGATCATAATAAGTTTGTTAGCATGCATGAAGTCTCAAGTTCGAACCTTCCGATGAGCTTAATACAAAAAATCCTTAATGTCTCCCGGGTTCGAG
CCTTGGGATTGGTGCGGGTGCCTCTGGAATTCGATGGTGCTTTGAAAGGAAATCTTGGGCAAGCTGGAGCAGGAGCTGTTCTGCGAGCACATGATGGAAGGGTGATATGT
ATACTTCGTGAAGGCTTAGGTACAGCAACAAATAATATTGTTGAATATCGAGCTATTCTTTTAGGGTTGAAGTATGCTCTTCAGAAAGGGTTTACTAGGATCCATGTCCA
AGAAGAGCCTGTGTTTTTCTGCCTACGACCTCCATTAATGGTTGCTTCAATCCCTACTGGAGGTGAAGTTTTCACATTGCCGCTCTTAAGGTTGCTGCTTGAGATACTGT
GTGCTCTAGATTCCATCTGCGCTGCTATTCGTCCCGAAAAATCACCAAGGGCAATTCTCGTTCGCGGAATCCCTGCAAATTTACTGCCTAATCTGGTTGAGATATGTGAT
CTTCCTGTTAGCGTGTATAAAAGACACTCATTGTCTAAAGAGACTGAGGAATATCTTGCTTCCGTTGGGCTTAAGAATACTCTGTACACTATTAAAGCTGCAGATATGAG
GTCGGATATTTTCGGTTCGCTTGTGCCTTGCATTGCTGCCATAAAGAAGAGATCAAGAGAAGCTCTTGTATCAAAAGATGTTGGGTCAACTGTTATAGCTTCTACAACAA
AAGATGCCTTGAGGAAGCATGTCAAGTCGCACGATTCCATGGTGTCCCGAGCAATATCTTCTAACCGTGTAAGTCAAAGTCTTGACACTACCATAACAATCAACCAATAC
TATCAACCATATACTCTGCTCTCTAGCTCAATAATTGGAGTGAAGTGGGGTAGCAAACTCAAAAGAGGAGGGCAAGGTAAGGCAGCAGCACATGTGGCCAAGCATGAAGT
AAAGCACGCACAAGGCATACGAGAGCTATTGGGTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATTTTCAAAAGAACCAGCGTTTTTTTTGCCTACGACCTCCATTAATGGCTGCTTCAATCCCTACTGGAGGTCAAGTTTTCACAATGCCGCTCTTAAGGTTGATGC
TTTAGATTCCGTGTGCTCCAGATTCCATCTGCACTACTATTCGTCCCGAAAAATCGCCAAGGGCAGTTCTCGTTTGCAGAAGTTTGATACTAAACCTTCTTCTATGGAAC
CGGAGAAGGGCGACTTCTTTGTTGTACGGAAGGGGGATGCTGTTGCAGTATATAAAAATTCTAGTGACTATCAGGCTGAAATTGGATCTTCGTCCCTGCAAATTTACTGC
CTAATCTGGTTGAGCGTGTATAAAGGACACTCATTGCCTAAAGACACTGAGGAATATCTTGCTTCCGTTGGGCTTAAGAATGCTCTGTACACTATTAAAGTTGCAGATAT
GAGGATGGAACTACTCCTCTCAAAGGTGAAGCTTCTGACCTGGCTGCCACAAAGAAGTGATCAAGAGAAGCTCTTGTATCAGAAAATGTTATCTAAATGTTTGCAGAGGT
CAACTGTTGTAGCTTCTACACCAAAAGATGCCTTGACGAAGCATGGACCAAAGAAAGACCTTCACCTTTTCTGGGATAGGGTCCTTCCAGTTATCAGAGAAGAATTTAAT
TTGGGAGGAATTTCCTTTAGCTTGTGCTTCAGGTTTAAGAGAAAGAGCATTGCTATCACAACTTCAGAACCTGCCAGCGCAGTAATCTGCGGAACTGTTGCATCTGTCAA
TTGGGATATCAAGTTAGATCATAATAAGTTTGTTAGCATGCATGAAGTCTCAAGTTCGAACCTTCCGATGAGCTTAATACAAAAAATCCTTAATGTCTCCCGGGTTCGAG
CCTTGGGATTGGTGCGGGTGCCTCTGGAATTCGATGGTGCTTTGAAAGGAAATCTTGGGCAAGCTGGAGCAGGAGCTGTTCTGCGAGCACATGATGGAAGGGTGATATGT
ATACTTCGTGAAGGCTTAGGTACAGCAACAAATAATATTGTTGAATATCGAGCTATTCTTTTAGGGTTGAAGTATGCTCTTCAGAAAGGGTTTACTAGGATCCATGTCCA
AGAAGAGCCTGTGTTTTTCTGCCTACGACCTCCATTAATGGTTGCTTCAATCCCTACTGGAGGTGAAGTTTTCACATTGCCGCTCTTAAGGTTGCTGCTTGAGATACTGT
GTGCTCTAGATTCCATCTGCGCTGCTATTCGTCCCGAAAAATCACCAAGGGCAATTCTCGTTCGCGGAATCCCTGCAAATTTACTGCCTAATCTGGTTGAGATATGTGAT
CTTCCTGTTAGCGTGTATAAAAGACACTCATTGTCTAAAGAGACTGAGGAATATCTTGCTTCCGTTGGGCTTAAGAATACTCTGTACACTATTAAAGCTGCAGATATGAG
GTCGGATATTTTCGGTTCGCTTGTGCCTTGCATTGCTGCCATAAAGAAGAGATCAAGAGAAGCTCTTGTATCAAAAGATGTTGGGTCAACTGTTATAGCTTCTACAACAA
AAGATGCCTTGAGGAAGCATGTCAAGTCGCACGATTCCATGGTGTCCCGAGCAATATCTTCTAACCGTGTAAGTCAAAGTCTTGACACTACCATAACAATCAACCAATAC
TATCAACCATATACTCTGCTCTCTAGCTCAATAATTGGAGTGAAGTGGGGTAGCAAACTCAAAAGAGGAGGGCAAGGTAAGGCAGCAGCACATGTGGCCAAGCATGAAGT
AAAGCACGCACAAGGCATACGAGAGCTATTGGGTGGTTAG
Protein sequenceShow/hide protein sequence
MPFSKEPAFFLPTTSINGCFNPYWRSSFHNAALKVDALDSVCSRFHLHYYSSRKIAKGSSRLQKFDTKPSSMEPEKGDFFVVRKGDAVAVYKNSSDYQAEIGSSSLQIYC
LIWLSVYKGHSLPKDTEEYLASVGLKNALYTIKVADMRMELLLSKVKLLTWLPQRSDQEKLLYQKMLSKCLQRSTVVASTPKDALTKHGPKKDLHLFWDRVLPVIREEFN
LGGISFSLCFRFKRKSIAITTSEPASAVICGTVASVNWDIKLDHNKFVSMHEVSSSNLPMSLIQKILNVSRVRALGLVRVPLEFDGALKGNLGQAGAGAVLRAHDGRVIC
ILREGLGTATNNIVEYRAILLGLKYALQKGFTRIHVQEEPVFFCLRPPLMVASIPTGGEVFTLPLLRLLLEILCALDSICAAIRPEKSPRAILVRGIPANLLPNLVEICD
LPVSVYKRHSLSKETEEYLASVGLKNTLYTIKAADMRSDIFGSLVPCIAAIKKRSREALVSKDVGSTVIASTTKDALRKHVKSHDSMVSRAISSNRVSQSLDTTITINQY
YQPYTLLSSSIIGVKWGSKLKRGGQGKAAAHVAKHEVKHAQGIRELLGG