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Moc08g31440 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g31440
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr8:22642070..22642300
RNA-Seq ExpressionMoc08g31440
SyntenyMoc08g31440
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]6.9e-1260.56Show/hide
Query:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        +  EAT+ STRVVD+   +++ VD  +TS QS+PSQ LR+PRRSG++VSQP+RY+ L ETQVVI +DGVED
Subjt:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
KAA0067938.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-1266.18Show/hide
Query:  EATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        EAT+ STRVVD+ D +++ VD  +TS QS+PSQ LR+PRRSG+IVSQP RY+ L ETQVVI +DGVED
Subjt:  EATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
TYK15861.1 gag/pol protein [Cucumis melo var. makuwa]2.4e-1261.97Show/hide
Query:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        +  EAT+ STRVVD+   +++ VD  +TS QS+PSQ LR+PRRSG++VSQP+RY+SL ETQVVI +DGVED
Subjt:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
TYK15984.1 gag/pol protein [Cucumis melo var. makuwa]6.9e-1260.56Show/hide
Query:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        +  EAT+ STRVVD+   +++ VD  +TS QS+PSQ LR+PRRSG++VSQP+RY+ L ETQVVI +DGVED
Subjt:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
TYK20422.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-1261.97Show/hide
Query:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        +  EAT+ STRVVD+   +++ VD  +TS+QS+PSQ LR+PRRSG+IVSQP+RY+ L ETQVVI +DGVED
Subjt:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
TrEMBL top hitse value%identityAlignment
A0A5A7TZD0 Gag/pol protein3.4e-1260.56Show/hide
Query:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        +  EAT+ STRVVD+   +++ VD  +TS QS+PSQ LR+PRRSG++VSQP+RY+ L ETQVVI +DGVED
Subjt:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
A0A5A7VJG3 Gag/pol protein8.9e-1366.18Show/hide
Query:  EATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        EAT+ STRVVD+ D +++ VD  +TS QS+PSQ LR+PRRSG+IVSQP RY+ L ETQVVI +DGVED
Subjt:  EATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
A0A5D3BUN8 Gag/pol protein3.4e-1260.56Show/hide
Query:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        +  EAT+ STRVVD+   +++ VD  +TS QS+PSQ LR+PRRSG++VSQP+RY+ L ETQVVI +DGVED
Subjt:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
A0A5D3CVC5 Gag/pol protein1.2e-1261.97Show/hide
Query:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        +  EAT+ STRVVD+   +++ VD  +TS QS+PSQ LR+PRRSG++VSQP+RY+SL ETQVVI +DGVED
Subjt:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
A0A5D3DA25 Gag/pol protein8.9e-1361.97Show/hide
Query:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
        +  EAT+ STRVVD+   +++ VD  +TS+QS+PSQ LR+PRRSG+IVSQP+RY+ L ETQVVI +DGVED
Subjt:  ISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVED
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAACGAGATTTCCGAAGAGGCTACAAACACGTCAACAAGAGTTGTTGATCAAACTGACACTACAACAAAAGTTGTTGACGGAGCCAGTACATCACTTCAGTCATA
TCCATCTCAAGAATTGAGAGTGCCTCGACGTAGTGGGAAGATTGTGTCACAACCTGATCGCTATATGAGTTTAATTGAAACCCAAGTTGTCATATCTAATGACGGTGTCG
AGGATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAACGAGATTTCCGAAGAGGCTACAAACACGTCAACAAGAGTTGTTGATCAAACTGACACTACAACAAAAGTTGTTGACGGAGCCAGTACATCACTTCAGTCATA
TCCATCTCAAGAATTGAGAGTGCCTCGACGTAGTGGGAAGATTGTGTCACAACCTGATCGCTATATGAGTTTAATTGAAACCCAAGTTGTCATATCTAATGACGGTGTCG
AGGATCATTGA
Protein sequenceShow/hide protein sequence
MINEISEEATNTSTRVVDQTDTTTKVVDGASTSLQSYPSQELRVPRRSGKIVSQPDRYMSLIETQVVISNDGVEDH