; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g31480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g31480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr8:22680918..22690088
RNA-Seq ExpressionMoc08g31480
SyntenyMoc08g31480
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051909.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]3.1e-1251.72Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF LH+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL    DGT  +K
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK

KAA0063387.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.8e-1251.72Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF +H+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL  L D TE +K
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK

TYK02449.1 F15O4.13 [Cucumis melo var. makuwa]6.3e-1352.87Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF LH+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL  L DGT  +K
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK

TYK08102.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.1e-1252.87Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF LH+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL  L DGT  +K
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK

TYK11649.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]8.2e-1352.22Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKKDGV
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF LH+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL  L DGT  +K  V
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKKDGV

TrEMBL top hitse value%identityAlignment
A0A5A7UEI2 Transposon Ty3-I Gag-Pol polyprotein1.5e-1251.72Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF LH+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL    DGT  +K
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK

A0A5A7V8R2 Transposon Ty3-I Gag-Pol polyprotein8.8e-1351.72Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF +H+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL  L D TE +K
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK

A0A5D3BWE8 F15O4.133.0e-1352.87Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF LH+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL  L DGT  +K
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK

A0A5D3C9X5 Transposon Ty3-I Gag-Pol polyprotein5.2e-1352.87Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF LH+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL  L DGT  +K
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKK

A0A5D3CN32 Transposon Ty3-I Gag-Pol polyprotein4.0e-1352.22Show/hide
Query:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKKDGV
        S+ +  D +   +  +VPEG IT+ KAKKIQEAF LH+Q+LANA  ET   E K LYNV+  +QEE+G KMA +KL  L DGT  +K  V
Subjt:  SEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTLMNQEENGAKMAHKKLSILRDGTEGKKDGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAACTTATTCCCCAACAGTCAAGTCTTCTTCGACAATGATCAAATGGCAGCAACTTCTTCACCAACGATCATGTGAAGATCCAATTTGGAGTCTAGCCTTTAA
TAGGGTTGACAAGTATCGTCACCCCTGGTCACCGATATCTGAGGTCAAGAGGAGTGATGCAAATCCAACAACGGATCCATCGAATGTACCCGAGGGAGCAATTACAAGAA
GCAAAGCAAAGAAGATTCAAGAGGCTTTCATATTACATCTTCAAAGGCTAGCTAATGCACACGAGGAGACGAATATTTCTGAGGCCAAAATTCTTTACAATGTTACTTTA
ATGAATCAAGAAGAGAATGGAGCAAAGATGGCACATAAAAAGTTGTCTATTTTGAGAGATGGCACGGAGGGCAAAAAAGATGGCGTACCACAAGTACCGCAAGATCCTAA
TATGGCTATTCTTCAAGCAATTCAAGATCCATTGAATGTACCCGAGGGAGTAATTACAAGAAGCAAAGCAAAGAAGATTCAAGAGGCTTTCATATTACATCTTCAAAGGC
TAGCAAATGCACACGAGGAGACGAAGATTTCTAAGGAGCACGAGTTGCTAGCTCTTCAAAGGTGCGAGGTTTTATACCTTGAAGAATGTAAAGAAGTCATCAGTGCATAC
CTTAAGTGCATAATTCGACAGCAGATAGTTCATGATTTAGGAATTCTCTTTCAAGCTATTCCCAACTCTCGATTGTTTCAGGCTCGAGATCTGTATACCAGTCAAAGGCA
TTTCCCTTCGAGATTCGGACGAATTGCCAAACCAGTTGATCACTTCTTGTACCTGCATTCTCACAAGTTTCGACAAAGTGAGCAATATGTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACAACTTATTCCCCAACAGTCAAGTCTTCTTCGACAATGATCAAATGGCAGCAACTTCTTCACCAACGATCATGTGAAGATCCAATTTGGAGTCTAGCCTTTAA
TAGGGTTGACAAGTATCGTCACCCCTGGTCACCGATATCTGAGGTCAAGAGGAGTGATGCAAATCCAACAACGGATCCATCGAATGTACCCGAGGGAGCAATTACAAGAA
GCAAAGCAAAGAAGATTCAAGAGGCTTTCATATTACATCTTCAAAGGCTAGCTAATGCACACGAGGAGACGAATATTTCTGAGGCCAAAATTCTTTACAATGTTACTTTA
ATGAATCAAGAAGAGAATGGAGCAAAGATGGCACATAAAAAGTTGTCTATTTTGAGAGATGGCACGGAGGGCAAAAAAGATGGCGTACCACAAGTACCGCAAGATCCTAA
TATGGCTATTCTTCAAGCAATTCAAGATCCATTGAATGTACCCGAGGGAGTAATTACAAGAAGCAAAGCAAAGAAGATTCAAGAGGCTTTCATATTACATCTTCAAAGGC
TAGCAAATGCACACGAGGAGACGAAGATTTCTAAGGAGCACGAGTTGCTAGCTCTTCAAAGGTGCGAGGTTTTATACCTTGAAGAATGTAAAGAAGTCATCAGTGCATAC
CTTAAGTGCATAATTCGACAGCAGATAGTTCATGATTTAGGAATTCTCTTTCAAGCTATTCCCAACTCTCGATTGTTTCAGGCTCGAGATCTGTATACCAGTCAAAGGCA
TTTCCCTTCGAGATTCGGACGAATTGCCAAACCAGTTGATCACTTCTTGTACCTGCATTCTCACAAGTTTCGACAAAGTGAGCAATATGTTGCTTAG
Protein sequenceShow/hide protein sequence
MATTYSPTVKSSSTMIKWQQLLHQRSCEDPIWSLAFNRVDKYRHPWSPISEVKRSDANPTTDPSNVPEGAITRSKAKKIQEAFILHLQRLANAHEETNISEAKILYNVTL
MNQEENGAKMAHKKLSILRDGTEGKKDGVPQVPQDPNMAILQAIQDPLNVPEGVITRSKAKKIQEAFILHLQRLANAHEETKISKEHELLALQRCEVLYLEECKEVISAY
LKCIIRQQIVHDLGILFQAIPNSRLFQARDLYTSQRHFPSRFGRIAKPVDHFLYLHSHKFRQSEQYVA