; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g32060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g32060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:23178989..23183981
RNA-Seq ExpressionMoc08g32060
SyntenyMoc08g32060
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143515.1 uncharacterized protein LOC111013388 [Momordica charantia]4.4e-2082.43Show/hide
Query:  MEELNAELKKIRDEIQEQVMEVHNVELKKMRQDLDNIQEQVTEIFNVLKNIVTVGNISQLNNLVEPHNNSSLRV
        +EELN ELK+IRDEIQE V EVHNVELKKMRQD+D IQ QVT I NVLK IVTVG+ISQ NNLVEPHNNSSLRV
Subjt:  MEELNAELKKIRDEIQEQVMEVHNVELKKMRQDLDNIQEQVTEIFNVLKNIVTVGNISQLNNLVEPHNNSSLRV

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]2.4e-1849.49Show/hide
Query:  SRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKAIFRLRRSDFSRRKSFDFGR
        + R   K+  F  IP  YTELL QLFQ N LAPVPV+P+QPPY +WY+ + RCDYHAG + HSTENCT LKY+V    +A+ +    +F +    D  +
Subjt:  SRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKAIFRLRRSDFSRRKSFDFGR

XP_022153553.1 uncharacterized protein LOC111021029 [Momordica charantia]2.2e-7265.75Show/hide
Query:  MEELNAELKKIRDEIQEQVMEVHNVELKKMRQDLDNIQEQVTEIFNVLKNIVTVGNISQLNNLVEPHNNSSLR---------------------------
        +EELN ELKKIRDEIQEQVMEV NVELKKMRQD+DNIQ+QV +I NVLKNIVTVG  SQ NNLVEP+NNSS R                           
Subjt:  MEELNAELKKIRDEIQEQVMEVHNVELKKMRQDLDNIQEQVTEIFNVLKNIVTVGNISQLNNLVEPHNNSSLR---------------------------

Query:  --------VEFTFQDGQTSKVNYSNNSKGKEKENVTNGNVEETAGKEYAQRWGEAMEQPPVPLINKESHLETNRSSFKRKNKVQAVVSKRKEKYQRGLVA
                VEFTF+D QT KVNYS+N KG+EKENVT             QRWG+A+EQ PVPLINKE H + N+SS KRKNKV AVVSKRK KYQ+G VA
Subjt:  --------VEFTFQDGQTSKVNYSNNSKGKEKENVTNGNVEETAGKEYAQRWGEAMEQPPVPLINKESHLETNRSSFKRKNKVQAVVSKRKEKYQRGLVA

Query:  YSPSTVPINSLTLQNDPQTLTDNHSRRRQLKRESFHSIPTFYTELLSQLFQCNL
        YSPSTVPINS+TLQ+DPQTL +NHS RRQLKRESFHSIPT YTELLSQLFQ NL
Subjt:  YSPSTVPINSLTLQNDPQTLTDNHSRRRQLKRESFHSIPTFYTELLSQLFQCNL

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]2.9e-1961.25Show/hide
Query:  SRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKA
        + R   K+  F  IP  YTELL QLFQ N LAPVPV+P+QPPY  WY+ + RCDYHAG +GHSTENCT+LKY+V    KA
Subjt:  SRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKA

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]9.8e-2059.04Show/hide
Query:  DNHSRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKA
        +  + R   K+  F  IP  YTELL QLFQ N LAPVPV+P+QPPY +WY+ + RCDYHAG +GHSTENCT+LKY+V    KA
Subjt:  DNHSRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKA

TrEMBL top hitse value%identityAlignment
A0A6J1CP05 uncharacterized protein LOC1110133882.1e-2082.43Show/hide
Query:  MEELNAELKKIRDEIQEQVMEVHNVELKKMRQDLDNIQEQVTEIFNVLKNIVTVGNISQLNNLVEPHNNSSLRV
        +EELN ELK+IRDEIQE V EVHNVELKKMRQD+D IQ QVT I NVLK IVTVG+ISQ NNLVEPHNNSSLRV
Subjt:  MEELNAELKKIRDEIQEQVMEVHNVELKKMRQDLDNIQEQVTEIFNVLKNIVTVGNISQLNNLVEPHNNSSLRV

A0A6J1D099 Ribonuclease H1.2e-1849.49Show/hide
Query:  SRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKAIFRLRRSDFSRRKSFDFGR
        + R   K+  F  IP  YTELL QLFQ N LAPVPV+P+QPPY +WY+ + RCDYHAG + HSTENCT LKY+V    +A+ +    +F +    D  +
Subjt:  SRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKAIFRLRRSDFSRRKSFDFGR

A0A6J1DHS7 uncharacterized protein LOC1110210291.1e-7265.75Show/hide
Query:  MEELNAELKKIRDEIQEQVMEVHNVELKKMRQDLDNIQEQVTEIFNVLKNIVTVGNISQLNNLVEPHNNSSLR---------------------------
        +EELN ELKKIRDEIQEQVMEV NVELKKMRQD+DNIQ+QV +I NVLKNIVTVG  SQ NNLVEP+NNSS R                           
Subjt:  MEELNAELKKIRDEIQEQVMEVHNVELKKMRQDLDNIQEQVTEIFNVLKNIVTVGNISQLNNLVEPHNNSSLR---------------------------

Query:  --------VEFTFQDGQTSKVNYSNNSKGKEKENVTNGNVEETAGKEYAQRWGEAMEQPPVPLINKESHLETNRSSFKRKNKVQAVVSKRKEKYQRGLVA
                VEFTF+D QT KVNYS+N KG+EKENVT             QRWG+A+EQ PVPLINKE H + N+SS KRKNKV AVVSKRK KYQ+G VA
Subjt:  --------VEFTFQDGQTSKVNYSNNSKGKEKENVTNGNVEETAGKEYAQRWGEAMEQPPVPLINKESHLETNRSSFKRKNKVQAVVSKRKEKYQRGLVA

Query:  YSPSTVPINSLTLQNDPQTLTDNHSRRRQLKRESFHSIPTFYTELLSQLFQCNL
        YSPSTVPINS+TLQ+DPQTL +NHS RRQLKRESFHSIPT YTELLSQLFQ NL
Subjt:  YSPSTVPINSLTLQNDPQTLTDNHSRRRQLKRESFHSIPTFYTELLSQLFQCNL

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222311.4e-1961.25Show/hide
Query:  SRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKA
        + R   K+  F  IP  YTELL QLFQ N LAPVPV+P+QPPY  WY+ + RCDYHAG +GHSTENCT+LKY+V    KA
Subjt:  SRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKA

A0A6J1E2J7 Ribonuclease H4.8e-2059.04Show/hide
Query:  DNHSRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKA
        +  + R   K+  F  IP  YTELL QLFQ N LAPVPV+P+QPPY +WY+ + RCDYHAG +GHSTENCT+LKY+V    KA
Subjt:  DNHSRRRQLKRESFHSIPTFYTELLSQLFQCNLLAPVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATTGAATGCTGAGCTAAAGAAAATAAGAGACGAGATTCAAGAACAGGTCATGGAGGTGCATAATGTAGAGCTAAAGAAGATGAGACAAGACCTCGATAATAT
TCAGGAGCAAGTCACGGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGGAAACATTTCTCAACTTAACAATTTAGTCGAACCTCATAATAATTCATCACTTAGGG
TTGAATTCACATTCCAAGATGGACAAACATCAAAGGTCAATTACTCAAATAATTCAAAAGGTAAAGAAAAAGAAAATGTTACCAATGGAAATGTTGAAGAGACTGCAGGG
AAAGAATATGCTCAGAGATGGGGAGAAGCAATGGAACAACCACCAGTACCTTTAATTAATAAAGAGTCACACCTTGAAACGAATAGAAGCTCTTTTAAAAGAAAAAATAA
AGTTCAGGCAGTAGTTTCGAAGCGCAAGGAGAAGTACCAACGAGGACTCGTGGCATACAGTCCTTCTACGGTACCCATAAACTCATTAACTCTGCAGAATGATCCACAAA
CATTAACTGACAATCATAGTAGGCGAAGACAACTAAAGCGAGAGAGCTTTCATTCGATCCCAACATTCTATACCGAGTTGCTATCCCAATTATTTCAATGTAATCTATTA
GCTCCCGTACCCGTAGAGCCATTACAACCACCTTATTCAAAGTGGTACAACCCGCATGTTCGTTGTGATTACCATGCAGGAACTGTAGGTCATTCAACTGAGAACTGTAC
TTCACTGAAGTATAAAGTGGTCATGAGACAAAAGGCCATCTTCAGACTGAGAAGATCTGATTTCTCTCGCAGGAAATCTTTCGATTTTGGGAGGCCCTTCACTGCACAAA
ATGCACCATCCGTCCTAAGAGAATTGCGCCAGAGGTCGCGCAACAGTTTCTCGTGGAGCCTCCTGTGGATCTCTTTAGCTTTTCCTCGGCCTTTAGAGTTAGAGCTAGTT
GATAAACCACACTCAATTGCTAGCGACAAGCTTTCCACAGCCTCCATTCCTATCACATATGATCTCTGGGTATTCCAGTCATTAACTCCTCATGCCACTGCGACCGTTTC
TAGGACTGACTCATGCCTCACCTGCACAGGTCTCCTACGCAACACATTTCAGCTCATCCTCAAGGTCATACTTCCGTCCAAGCCGAGTTCACAAGCTTGGTCATTTGTTA
TATCAAACATTTCATTCGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATTGAATGCTGAGCTAAAGAAAATAAGAGACGAGATTCAAGAACAGGTCATGGAGGTGCATAATGTAGAGCTAAAGAAGATGAGACAAGACCTCGATAATAT
TCAGGAGCAAGTCACGGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGGAAACATTTCTCAACTTAACAATTTAGTCGAACCTCATAATAATTCATCACTTAGGG
TTGAATTCACATTCCAAGATGGACAAACATCAAAGGTCAATTACTCAAATAATTCAAAAGGTAAAGAAAAAGAAAATGTTACCAATGGAAATGTTGAAGAGACTGCAGGG
AAAGAATATGCTCAGAGATGGGGAGAAGCAATGGAACAACCACCAGTACCTTTAATTAATAAAGAGTCACACCTTGAAACGAATAGAAGCTCTTTTAAAAGAAAAAATAA
AGTTCAGGCAGTAGTTTCGAAGCGCAAGGAGAAGTACCAACGAGGACTCGTGGCATACAGTCCTTCTACGGTACCCATAAACTCATTAACTCTGCAGAATGATCCACAAA
CATTAACTGACAATCATAGTAGGCGAAGACAACTAAAGCGAGAGAGCTTTCATTCGATCCCAACATTCTATACCGAGTTGCTATCCCAATTATTTCAATGTAATCTATTA
GCTCCCGTACCCGTAGAGCCATTACAACCACCTTATTCAAAGTGGTACAACCCGCATGTTCGTTGTGATTACCATGCAGGAACTGTAGGTCATTCAACTGAGAACTGTAC
TTCACTGAAGTATAAAGTGGTCATGAGACAAAAGGCCATCTTCAGACTGAGAAGATCTGATTTCTCTCGCAGGAAATCTTTCGATTTTGGGAGGCCCTTCACTGCACAAA
ATGCACCATCCGTCCTAAGAGAATTGCGCCAGAGGTCGCGCAACAGTTTCTCGTGGAGCCTCCTGTGGATCTCTTTAGCTTTTCCTCGGCCTTTAGAGTTAGAGCTAGTT
GATAAACCACACTCAATTGCTAGCGACAAGCTTTCCACAGCCTCCATTCCTATCACATATGATCTCTGGGTATTCCAGTCATTAACTCCTCATGCCACTGCGACCGTTTC
TAGGACTGACTCATGCCTCACCTGCACAGGTCTCCTACGCAACACATTTCAGCTCATCCTCAAGGTCATACTTCCGTCCAAGCCGAGTTCACAAGCTTGGTCATTTGTTA
TATCAAACATTTCATTCGGTTAA
Protein sequenceShow/hide protein sequence
MEELNAELKKIRDEIQEQVMEVHNVELKKMRQDLDNIQEQVTEIFNVLKNIVTVGNISQLNNLVEPHNNSSLRVEFTFQDGQTSKVNYSNNSKGKEKENVTNGNVEETAG
KEYAQRWGEAMEQPPVPLINKESHLETNRSSFKRKNKVQAVVSKRKEKYQRGLVAYSPSTVPINSLTLQNDPQTLTDNHSRRRQLKRESFHSIPTFYTELLSQLFQCNLL
APVPVEPLQPPYSKWYNPHVRCDYHAGTVGHSTENCTSLKYKVVMRQKAIFRLRRSDFSRRKSFDFGRPFTAQNAPSVLRELRQRSRNSFSWSLLWISLAFPRPLELELV
DKPHSIASDKLSTASIPITYDLWVFQSLTPHATATVSRTDSCLTCTGLLRNTFQLILKVILPSKPSSQAWSFVISNISFG