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Moc08g32110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g32110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr8:23217690..23218603
RNA-Seq ExpressionMoc08g32110
SyntenyMoc08g32110
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]1.7e-1132.48Show/hide
Query:  EILVHPSDEQVAEARRLICRPHNTWTISTTGKLSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVG
        E++    +EQ+ E  + I      W +S  G  +    ++   A VW + + +  + ++H  +I  NRA+++Y ++ G   N G LI ++IR+C+EK  G
Subjt:  EILVHPSDEQVAEARRLICRPHNTWTISTTGKLSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVG

Query:  PLVFPGLITELCLQAGV
         L FP LI+ELC+Q+ V
Subjt:  PLVFPGLITELCLQAGV

KOM28175.1 hypothetical protein LR48_Vigan504s000300 [Vigna angularis]8.6e-1137.76Show/hide
Query:  LSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVEAADANVVIPKKP
        L +K + ++  + +WM +V +   P +H S +  NRA+++Y ++ G   N G+LI NEIR+C+     PL  P LIT LC Q GV+     V  P+KP
Subjt:  LSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVEAADANVVIPKKP

RYQ84197.1 hypothetical protein Ahy_B10g103224 [Arachis hypogaea]1.1e-1033.58Show/hide
Query:  DEQVAEARRLICRPHNTWTISTTGK-LSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSE--KMVGPLVF
        D++  +    +C+    W + + G+ L L+  D+  QA  W  +V+   IPTS++S +  NRA+M++ +MKG E N GE+I   I   +E  K    L +
Subjt:  DEQVAEARRLICRPHNTWTISTTGK-LSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSE--KMVGPLVF

Query:  PGLITELCLQAGV---EAADANVVIPKKPFTSLR
        P  I  LC  AGV   E  + ++V   KP T  R
Subjt:  PGLITELCLQAGV---EAADANVVIPKKPFTSLR

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]3.4e-10084.51Show/hide
Query:  NEILVHPSDEQVAEARRLICRPHNTWTISTTGKLSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMV
        NEILVHPSDEQV EARRLICRPH TWTIST GKLSLKPLDINEQATVWMYVVKN  IPTS+DSSIK NRAM+VYIL+KGVEFNFGELIRNEI+SCSEK+ 
Subjt:  NEILVHPSDEQVAEARRLICRPHNTWTISTTGKLSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMV

Query:  GPLVFPGLITELCLQAGVEAADANVVIPKKPFTSLRKVWGYSIIREKDSSITVADPETRGVVTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSFP
                       AGVEAADANVV+PKKPF SLRKV GYSI+RE+DS IT ADPETRGVVTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSFP
Subjt:  GPLVFPGLITELCLQAGVEAADANVVIPKKPFTSLRKVWGYSIIREKDSSITVADPETRGVVTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSFP

Query:  DELAADLPSSFRLPTDSNDDESSDDE
        DELAADLPSS RLPTDSNDDESSDDE
Subjt:  DELAADLPSSFRLPTDSNDDESSDDE

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]4.7e-5767.96Show/hide
Query:  VWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVEAADANVVIPKKPFTSLRKVWGYSIIRE
        +W YVVKN  I TS+DSSI+  R M+VYILMKG+EFNF ELIRNEI  C+EKMVGPL+FP  I ELCL+AGVEA   +VV+ KK  TS+R+V GY I+RE
Subjt:  VWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVEAADANVVIPKKPFTSLRKVWGYSIIRE

Query:  KDSSITVADPETRGVVTREQYDE---LRHKYELLLVTQRATCAFLKKIYGDEAPSFPDELAADLPSSFRLPTDSNDDESSD
        +DS IT ADP+TRGVVTREQYDE   LRH Y+LL  TQ ATC FLKK+YGD APS PDELAADLPSS R PT   DD   D
Subjt:  KDSSITVADPETRGVVTREQYDE---LRHKYELLLVTQRATCAFLKKIYGDEAPSFPDELAADLPSSFRLPTDSNDDESSD

TrEMBL top hitse value%identityAlignment
A0A0L9TC28 Uncharacterized protein4.2e-1137.76Show/hide
Query:  LSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVEAADANVVIPKKP
        L +K + ++  + +WM +V +   P +H S +  NRA+++Y ++ G   N G+LI NEIR+C+     PL  P LIT LC Q GV+     V  P+KP
Subjt:  LSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVEAADANVVIPKKP

A0A444X3G7 Uncharacterized protein5.5e-1133.58Show/hide
Query:  DEQVAEARRLICRPHNTWTISTTGK-LSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSE--KMVGPLVF
        D++  +    +C+    W + + G+ L L+  D+  QA  W  +V+   IPTS++S +  NRA+M++ +MKG E N GE+I   I   +E  K    L +
Subjt:  DEQVAEARRLICRPHNTWTISTTGK-LSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSE--KMVGPLVF

Query:  PGLITELCLQAGV---EAADANVVIPKKPFTSLR
        P  I  LC  AGV   E  + ++V   KP T  R
Subjt:  PGLITELCLQAGV---EAADANVVIPKKPFTSLR

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220071.7e-10084.51Show/hide
Query:  NEILVHPSDEQVAEARRLICRPHNTWTISTTGKLSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMV
        NEILVHPSDEQV EARRLICRPH TWTIST GKLSLKPLDINEQATVWMYVVKN  IPTS+DSSIK NRAM+VYIL+KGVEFNFGELIRNEI+SCSEK+ 
Subjt:  NEILVHPSDEQVAEARRLICRPHNTWTISTTGKLSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMV

Query:  GPLVFPGLITELCLQAGVEAADANVVIPKKPFTSLRKVWGYSIIREKDSSITVADPETRGVVTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSFP
                       AGVEAADANVV+PKKPF SLRKV GYSI+RE+DS IT ADPETRGVVTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSFP
Subjt:  GPLVFPGLITELCLQAGVEAADANVVIPKKPFTSLRKVWGYSIIREKDSSITVADPETRGVVTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSFP

Query:  DELAADLPSSFRLPTDSNDDESSDDE
        DELAADLPSS RLPTDSNDDESSDDE
Subjt:  DELAADLPSSFRLPTDSNDDESSDDE

A0A6J1E204 uncharacterized protein LOC1110257022.3e-5767.96Show/hide
Query:  VWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVEAADANVVIPKKPFTSLRKVWGYSIIRE
        +W YVVKN  I TS+DSSI+  R M+VYILMKG+EFNF ELIRNEI  C+EKMVGPL+FP  I ELCL+AGVEA   +VV+ KK  TS+R+V GY I+RE
Subjt:  VWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVEAADANVVIPKKPFTSLRKVWGYSIIRE

Query:  KDSSITVADPETRGVVTREQYDE---LRHKYELLLVTQRATCAFLKKIYGDEAPSFPDELAADLPSSFRLPTDSNDDESSD
        +DS IT ADP+TRGVVTREQYDE   LRH Y+LL  TQ ATC FLKK+YGD APS PDELAADLPSS R PT   DD   D
Subjt:  KDSSITVADPETRGVVTREQYDE---LRHKYELLLVTQRATCAFLKKIYGDEAPSFPDELAADLPSSFRLPTDSNDDESSD

W9RBS1 Uncharacterized protein8.4e-1232.48Show/hide
Query:  EILVHPSDEQVAEARRLICRPHNTWTISTTGKLSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVG
        E++    +EQ+ E  + I      W +S  G  +    ++   A VW + + +  + ++H  +I  NRA+++Y ++ G   N G LI ++IR+C+EK  G
Subjt:  EILVHPSDEQVAEARRLICRPHNTWTISTTGKLSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNEIRSCSEKMVG

Query:  PLVFPGLITELCLQAGV
         L FP LI+ELC+Q+ V
Subjt:  PLVFPGLITELCLQAGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGAGGAGGCTTGTGGAGAATGGTTGGGAGACATTGTAATGAAATTTTGGTGCATCCATCGGACGAGCAAGTGGCGGAGGCGCGTAGACTTATTTGTAGA
CCACATAATACATGGACTATCTCAACCACGGGGAAGCTTTCTTTAAAGCCCCTTGACATTAATGAGCAAGCGACAGTTTGGATGTATGTGGTGAAGAACTGGTCG
ATACCCACTTCTCATGATTCCTCCATTAAGTGCAATAGGGCGATGATGGTGTACATTCTCATGAAGGGCGTTGAGTTCAACTTTGGGGAACTCATAAGAAATGAG
ATACGGAGTTGCTCGGAGAAAATGGTAGGCCCACTTGTTTTTCCTGGACTAATAACTGAGTTATGCTTGCAGGCAGGAGTGGAAGCCGCTGATGCCAATGTTGTG
ATACCTAAGAAGCCTTTCACATCTCTAAGAAAAGTTTGGGGGTATTCCATTATTCGAGAGAAAGATTCTTCCATTACTGTCGCGGATCCCGAGACCCGAGGGGTG
GTGACTAGGGAGCAGTATGACGAGCTTAGGCACAAGTATGAGCTTTTGTTAGTCACTCAACGTGCTACATGTGCTTTCCTTAAGAAGATATACGGTGATGAAGCA
CCTTCTTTCCCCGATGAGCTGGCGGCCGATTTACCATCTTCTTTCCGTCTTCCTACCGATTCCAACGACGATGAGTCTTCTGATGATGAATATGGGAGTATCTCC
CTCTTTTTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGAGGAGGCTTGTGGAGAATGGTTGGGAGACATTGTAATGAAATTTTGGTGCATCCATCGGACGAGCAAGTGGCGGAGGCGCGTAGACTTATTTGTAGA
CCACATAATACATGGACTATCTCAACCACGGGGAAGCTTTCTTTAAAGCCCCTTGACATTAATGAGCAAGCGACAGTTTGGATGTATGTGGTGAAGAACTGGTCG
ATACCCACTTCTCATGATTCCTCCATTAAGTGCAATAGGGCGATGATGGTGTACATTCTCATGAAGGGCGTTGAGTTCAACTTTGGGGAACTCATAAGAAATGAG
ATACGGAGTTGCTCGGAGAAAATGGTAGGCCCACTTGTTTTTCCTGGACTAATAACTGAGTTATGCTTGCAGGCAGGAGTGGAAGCCGCTGATGCCAATGTTGTG
ATACCTAAGAAGCCTTTCACATCTCTAAGAAAAGTTTGGGGGTATTCCATTATTCGAGAGAAAGATTCTTCCATTACTGTCGCGGATCCCGAGACCCGAGGGGTG
GTGACTAGGGAGCAGTATGACGAGCTTAGGCACAAGTATGAGCTTTTGTTAGTCACTCAACGTGCTACATGTGCTTTCCTTAAGAAGATATACGGTGATGAAGCA
CCTTCTTTCCCCGATGAGCTGGCGGCCGATTTACCATCTTCTTTCCGTCTTCCTACCGATTCCAACGACGATGAGTCTTCTGATGATGAATATGGGAGTATCTCC
CTCTTTTTGTTTTGA
Protein sequenceShow/hide protein sequence
MLGGGLWRMVGRHCNEILVHPSDEQVAEARRLICRPHNTWTISTTGKLSLKPLDINEQATVWMYVVKNWSIPTSHDSSIKCNRAMMVYILMKGVEFNFGELIRNE
IRSCSEKMVGPLVFPGLITELCLQAGVEAADANVVIPKKPFTSLRKVWGYSIIREKDSSITVADPETRGVVTREQYDELRHKYELLLVTQRATCAFLKKIYGDEA
PSFPDELAADLPSSFRLPTDSNDDESSDDEYGSISLFLF