; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g33090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g33090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:24028773..24030335
RNA-Seq ExpressionMoc08g33090
SyntenyMoc08g33090
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.4e-19074.67Show/hide
Query:  MPQYTTYNPLYDIPAGQFPPPLVRGASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGL
        MPQYTTYNPLYD+P GQ+  P V+GA Q P  IIF+EPEQ+M+PPTVLNLG   A  DP  Q APS+EK EVL+ERLRA+E TDVFGNIDASQLC +SGL
Subjt:  MPQYTTYNPLYDIPAGQFPPPLVRGASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGL

Query:  VIPPKFKIPEFEKYNGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTI
        VIPPK K+PEFEKYNGSSCPKNHL MYCRKMAAY+QNDKLLIHCFQDSLSGPASRWYM LDS HVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKK+ 
Subjt:  VIPPKFKIPEFEKYNGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTI

Query:  ESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM------
        +SFKEYAQRWRDTAAQVQPPL DKELS+MFINTLKHPFYDRMIGSAST+FSDI+TIGERIEYGV+HGRITST  E    KKA+ SKK EGEVQM      
Subjt:  ESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM------

Query:  -----------------YTT--------------------SQNFRPPA---------SRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLP
                         Y T                    SQNFRPPA         S+ FQPRG Q NT YTQGQQNNR  RKQ+QFDPIPMTYTELLP
Subjt:  -----------------YTT--------------------SQNFRPPA---------SRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLP

Query:  QLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG
        QLFQNNQLAPVPVDPIQPPYP WYDANARCDYHAGAI HSTENCT LKYRVQALIKAG
Subjt:  QLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]1.2e-25586.54Show/hide
Query:  MEDDRKAEQEKTRKDIEELREKLDAILLALEKGKTIAETSNPIHEPQTPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVRGAS
        MEDDRK+EQEKTRKDIEELREKLDAILLALEKGKTIAETSNPIHEP TPQFPPGFEPSFRPAGPSFRPMTEGFM QYTTYNPLYDIPAGQFPPPLVRG  
Subjt:  MEDDRKAEQEKTRKDIEELREKLDAILLALEKGKTIAETSNPIHEPQTPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVRGAS

Query:  QAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLIMY
        QAP GIIFQEPEQV+APPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCL SGLVIPPKFKIPEFEKY+GSSCPKNHLIMY
Subjt:  QAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLIMY

Query:  CRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKELS
        CRKMAAYIQNDKLLIHCFQDSLSGP S WYMHLDS HV SWKNLADSFLKQYKHNIDM  DRLDLQ MEKKT ESFKEY QRWRDTAAQ QPP TDKELS
Subjt:  CRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKELS

Query:  SMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM---------------------------------
        SMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGV HGRITSTVGESST K  TSSKK EGEVQM                                 
Subjt:  SMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM---------------------------------

Query:  --------YTTSQNFRPPASRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIG
                YT SQNFRPPAS+GFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDAN RCDYHAGAIG
Subjt:  --------YTTSQNFRPPASRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIG

Query:  HSTENCTPLKYRVQALIKAG
        HSTENCT LKYRVQALIKAG
Subjt:  HSTENCTPLKYRVQALIKAG

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]4.9e-18069.02Show/hide
Query:  DDRKAEQEKTRKDIEELREKLDAILLALEKGKTIAE---TSNPIHEPQ-TPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVRG
        +D+KAEQEKTRKDIEELREKLD I L LEKGK  A+   +SNPIHEPQ TP +PPG+       GP  RP+ EGFMPQYTTYNPLYD+P GQ+P   V+G
Subjt:  DDRKAEQEKTRKDIEELREKLDAILLALEKGKTIAE---TSNPIHEPQ-TPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVRG

Query:  ASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLI
        A Q P  IIF+EPEQ+M+PPTV NLGG  A  DP  Q A S EK EVLEERLRA+EGTDVFGNIDASQLCL+SGLVIPPKFK+PEFEKY+GSSCPKNHLI
Subjt:  ASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLI

Query:  MYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKE
        MYCRKM AY+QN KLLIHCFQDSL G ASRWYM LDS HVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK + ESFKEYAQRWRDTAAQVQPPLTDKE
Subjt:  MYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKE

Query:  LSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQMYTTSQNFRPPASRGFQPRGYQQNTVYTQGQQ
        LS+MFINTLKHPFYDRMIGSAST+FSDI+TIGERIEYGV+H RITST  E    KKA+ SKK EGE                                  
Subjt:  LSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQMYTTSQNFRPPASRGFQPRGYQQNTVYTQGQQ

Query:  NNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG
                                      L PVPVDPIQP YP WYDANARCDYHAGAIGHSTENCT LKYRVQAL+KAG
Subjt:  NNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]4.5e-17375.6Show/hide
Query:  VMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLIMYCRKMAAYIQNDKL
        +M+PPTVLNLGG  A  D   Q APS+EK EVLEERLRA+EGT VFGNIDASQLCL+SGLVIPPKFK+PEFEKY+GSSCPKNHLIMYCRKMAAY+QNDKL
Subjt:  VMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLIMYCRKMAAYIQNDKL

Query:  LIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYD
        LIHCFQDSLSGPASRWYM LDS +VGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKK+ ESFKEYAQRWRDTAAQVQPPLTDKELS+MFINTLKHPFYD
Subjt:  LIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYD

Query:  RMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM------------------YT-------------------------T
        RMIG+AST+FSDI+TIGERIEYGV+HGRITSTV E    KKA+ SKK EGEVQM                  YT                         T
Subjt:  RMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM------------------YT-------------------------T

Query:  SQNFRP---------PASRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHS
         QNFRP         PAS+ FQPRG Q NT+YTQ QQ NR  RKQ+QFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYP WYD NARCDYHAGAIGHS
Subjt:  SQNFRP---------PASRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHS

Query:  TENCTPLKYRVQALIKAG
        TENCT LKYRVQALIKAG
Subjt:  TENCTPLKYRVQALIKAG

XP_031737553.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402446 [Cucumis sativus]8.5e-14054.47Show/hide
Query:  DDRKAEQEKTRKDIEELREKLDAI--LLALEKGKTIAET---SNPIHEPQTPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVR
        +++  + +K R+DI  L E++  I  LL+  KGK + ET   SNP+ +   P +PPGF P    A  S           Y   NPL+D+     PPP+  
Subjt:  DDRKAEQEKTRKDIEELREKLDAI--LLALEKGKTIAET---SNPIHEPQTPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVR

Query:  GASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHL
                    + EQ+     + ++G        + +  P+ +KL+VLEERLRA+EGTDV+GNIDA+QLCL+ GL+IP KFK+PEF+KY+GSSCP++HL
Subjt:  GASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHL

Query:  IMYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDK
        IMYCRKMAA+I NDKLLIHCFQDSL+GPA+RWY+ LD+ H+  WK+LAD+FLKQYKHNIDMAPDRLDLQRMEKK+ ESFKEYAQRWRD AA+VQPPLTDK
Subjt:  IMYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDK

Query:  ELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM--YTTSQNFRPPASRGFQPRGYQQN-----
        E++ MF+NTL+ PFYDRMIG+A+T+FSDI+ IGERIEYG+KHGR+  T  E    KK  + KK EGEV    +    N +      F  R + Q+     
Subjt:  ELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM--YTTSQNFRPPASRGFQPRGYQQN-----

Query:  TVYTQGQQNNRSTRKQSQ---FDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG
        +  T    NN  ++  S+   FDPIPMTYTELLPQL  N QLAP+P++PIQPPYP WYD NARCDYHAG +GHSTENC  LK +VQ+LI AG
Subjt:  TVYTQGQQNNRSTRKQSQ---FDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein5.2e-13551.55Show/hide
Query:  DDRKAEQEKTRKDIEELREKLDAI--LLALEKGKTI---AETSNPIHEPQTPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVR
        +++  + +K R++I  L E++  I  LL++ KGK +   A++SNPI +   P +PPGF P       S    T+ ++P     NPLY +      PP++ 
Subjt:  DDRKAEQEKTRKDIEELREKLDAI--LLALEKGKTI---AETSNPIHEPQTPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVR

Query:  GASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHL
        G          Q+ EQ                     +  P+ +KL+VLEERLRA+E TDV+GNIDA+QLCL+ GL+IP KFK+PEF+KY+GS+CP++HL
Subjt:  GASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHL

Query:  IMYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDK
        IMYCRKMA +I NDKLL+HCFQDSL+ PASRWY+ LD+ H+  WK+LAD+FLKQYKHNIDMAPDRLDLQR+EKK+ ESFKEYAQRWRD  A+VQPPLTDK
Subjt:  IMYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDK

Query:  ELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQ---------------MYTTSQNFR-------
        E++SMF+NTL+ PFY+RMIG+AST+FSDI+ IGERIEYG+KHGR+     E    KK T SKK EGEV                     QNF        
Subjt:  ELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQ---------------MYTTSQNFR-------

Query:  --------PPASRGFQPRGYQQNT----VYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTE
                P  +    P+    N+    V  QG + N  T +   FDPIPMTYTELLPQL QN QLA +P+ PIQPPYP WYD+NARCDYHAG +GHSTE
Subjt:  --------PPASRGFQPRGYQQNT----VYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTE

Query:  NCTPLKYRVQALIKAG
        NC  LK  VQ+LI AG
Subjt:  NCTPLKYRVQALIKAG

A0A6J1D099 Ribonuclease H6.7e-19174.67Show/hide
Query:  MPQYTTYNPLYDIPAGQFPPPLVRGASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGL
        MPQYTTYNPLYD+P GQ+  P V+GA Q P  IIF+EPEQ+M+PPTVLNLG   A  DP  Q APS+EK EVL+ERLRA+E TDVFGNIDASQLC +SGL
Subjt:  MPQYTTYNPLYDIPAGQFPPPLVRGASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGL

Query:  VIPPKFKIPEFEKYNGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTI
        VIPPK K+PEFEKYNGSSCPKNHL MYCRKMAAY+QNDKLLIHCFQDSLSGPASRWYM LDS HVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKK+ 
Subjt:  VIPPKFKIPEFEKYNGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTI

Query:  ESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM------
        +SFKEYAQRWRDTAAQVQPPL DKELS+MFINTLKHPFYDRMIGSAST+FSDI+TIGERIEYGV+HGRITST  E    KKA+ SKK EGEVQM      
Subjt:  ESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM------

Query:  -----------------YTT--------------------SQNFRPPA---------SRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLP
                         Y T                    SQNFRPPA         S+ FQPRG Q NT YTQGQQNNR  RKQ+QFDPIPMTYTELLP
Subjt:  -----------------YTT--------------------SQNFRPPA---------SRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLP

Query:  QLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG
        QLFQNNQLAPVPVDPIQPPYP WYDANARCDYHAGAI HSTENCT LKYRVQALIKAG
Subjt:  QLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222311.3e-25586.54Show/hide
Query:  MEDDRKAEQEKTRKDIEELREKLDAILLALEKGKTIAETSNPIHEPQTPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVRGAS
        MEDDRK+EQEKTRKDIEELREKLDAILLALEKGKTIAETSNPIHEP TPQFPPGFEPSFRPAGPSFRPMTEGFM QYTTYNPLYDIPAGQFPPPLVRG  
Subjt:  MEDDRKAEQEKTRKDIEELREKLDAILLALEKGKTIAETSNPIHEPQTPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVRGAS

Query:  QAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLIMY
        QAP GIIFQEPEQV+APPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCL SGLVIPPKFKIPEFEKY+GSSCPKNHLIMY
Subjt:  QAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLIMY

Query:  CRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKELS
        CRKMAAYIQNDKLLIHCFQDSLSGP S WYMHLDS HV SWKNLADSFLKQYKHNIDM  DRLDLQ MEKKT ESFKEY QRWRDTAAQ QPP TDKELS
Subjt:  CRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKELS

Query:  SMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM---------------------------------
        SMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGV HGRITSTVGESST K  TSSKK EGEVQM                                 
Subjt:  SMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM---------------------------------

Query:  --------YTTSQNFRPPASRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIG
                YT SQNFRPPAS+GFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDAN RCDYHAGAIG
Subjt:  --------YTTSQNFRPPASRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIG

Query:  HSTENCTPLKYRVQALIKAG
        HSTENCT LKYRVQALIKAG
Subjt:  HSTENCTPLKYRVQALIKAG

A0A6J1DZ90 Ribonuclease H2.4e-18069.02Show/hide
Query:  DDRKAEQEKTRKDIEELREKLDAILLALEKGKTIAE---TSNPIHEPQ-TPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVRG
        +D+KAEQEKTRKDIEELREKLD I L LEKGK  A+   +SNPIHEPQ TP +PPG+       GP  RP+ EGFMPQYTTYNPLYD+P GQ+P   V+G
Subjt:  DDRKAEQEKTRKDIEELREKLDAILLALEKGKTIAE---TSNPIHEPQ-TPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVRG

Query:  ASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLI
        A Q P  IIF+EPEQ+M+PPTV NLGG  A  DP  Q A S EK EVLEERLRA+EGTDVFGNIDASQLCL+SGLVIPPKFK+PEFEKY+GSSCPKNHLI
Subjt:  ASQAPVGIIFQEPEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLI

Query:  MYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKE
        MYCRKM AY+QN KLLIHCFQDSL G ASRWYM LDS HVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEK + ESFKEYAQRWRDTAAQVQPPLTDKE
Subjt:  MYCRKMAAYIQNDKLLIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKE

Query:  LSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQMYTTSQNFRPPASRGFQPRGYQQNTVYTQGQQ
        LS+MFINTLKHPFYDRMIGSAST+FSDI+TIGERIEYGV+H RITST  E    KKA+ SKK EGE                                  
Subjt:  LSSMFINTLKHPFYDRMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQMYTTSQNFRPPASRGFQPRGYQQNTVYTQGQQ

Query:  NNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG
                                      L PVPVDPIQP YP WYDANARCDYHAGAIGHSTENCT LKYRVQAL+KAG
Subjt:  NNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG

A0A6J1E2J7 Ribonuclease H2.2e-17375.6Show/hide
Query:  VMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLIMYCRKMAAYIQNDKL
        +M+PPTVLNLGG  A  D   Q APS+EK EVLEERLRA+EGT VFGNIDASQLCL+SGLVIPPKFK+PEFEKY+GSSCPKNHLIMYCRKMAAY+QNDKL
Subjt:  VMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLIMYCRKMAAYIQNDKL

Query:  LIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYD
        LIHCFQDSLSGPASRWYM LDS +VGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKK+ ESFKEYAQRWRDTAAQVQPPLTDKELS+MFINTLKHPFYD
Subjt:  LIHCFQDSLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYD

Query:  RMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM------------------YT-------------------------T
        RMIG+AST+FSDI+TIGERIEYGV+HGRITSTV E    KKA+ SKK EGEVQM                  YT                         T
Subjt:  RMIGSASTSFSDILTIGERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQM------------------YT-------------------------T

Query:  SQNFRP---------PASRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHS
         QNFRP         PAS+ FQPRG Q NT+YTQ QQ NR  RKQ+QFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYP WYD NARCDYHAGAIGHS
Subjt:  SQNFRP---------PASRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPPYPGWYDANARCDYHAGAIGHS

Query:  TENCTPLKYRVQALIKAG
        TENCT LKYRVQALIKAG
Subjt:  TENCTPLKYRVQALIKAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGACCGTAAAGCCGAACAGGAAAAAACGAGGAAGGATATTGAAGAGCTGCGAGAGAAGTTAGACGCCATCCTCCTCGCCCTTGAAAAGGGGAAGACGATTGC
AGAAACTAGCAATCCAATCCACGAGCCACAAACCCCTCAGTTCCCGCCAGGTTTTGAGCCATCTTTTCGGCCAGCGGGACCGTCTTTCAGGCCAATGACAGAGGGATTTA
TGCCTCAATACACAACGTACAACCCTCTTTATGATATTCCGGCTGGGCAGTTCCCACCTCCGTTGGTCAGGGGAGCTTCGCAAGCTCCAGTCGGCATTATTTTTCAAGAG
CCAGAGCAAGTCATGGCGCCACCTACAGTTCTTAATCTGGGTGGTCCTCAAGCAAATAAGGACCCAGAAAGACAGGAGGCCCCTAGCAGTGAGAAATTAGAGGTTCTGGA
GGAAAGACTGCGAGCAGTAGAGGGAACAGATGTTTTTGGCAACATTGATGCCTCCCAACTATGCTTGCTGTCGGGACTAGTCATCCCTCCAAAGTTCAAAATTCCAGAGT
TTGAGAAGTACAATGGTTCTTCTTGTCCTAAGAACCATCTTATCATGTACTGTAGAAAGATGGCAGCGTATATCCAGAATGACAAGCTATTGATACACTGTTTTCAGGAT
AGTTTGTCTGGCCCGGCTTCCCGTTGGTACATGCATTTAGACAGTGTCCATGTTGGTTCGTGGAAGAATTTGGCTGATTCCTTCCTAAAGCAGTATAAACATAACATAGA
TATGGCGCCCGACCGCTTAGATCTGCAGAGGATGGAGAAAAAAACCATAGAAAGCTTTAAGGAGTACGCTCAAAGATGGCGGGATACAGCTGCTCAGGTCCAACCTCCTT
TGACTGATAAAGAGCTATCTTCCATGTTCATTAACACCCTAAAACATCCTTTTTATGATCGGATGATAGGAAGTGCTTCTACGAGCTTCTCCGATATTTTGACTATTGGA
GAAAGAATTGAATATGGGGTTAAGCATGGTCGAATAACCAGCACTGTTGGAGAATCGTCAACCACAAAGAAGGCGACATCCTCGAAGAAAAATGAAGGTGAGGTGCAAAT
GTATACTACCTCTCAGAATTTTAGACCTCCAGCAAGTCGAGGCTTTCAGCCCAGGGGTTACCAGCAAAATACCGTTTATACTCAGGGGCAGCAGAACAACAGATCGACAC
GTAAGCAATCTCAGTTTGACCCAATTCCAATGACTTACACTGAGCTCCTGCCCCAGTTATTTCAGAATAATCAACTGGCACCGGTACCCGTGGATCCGATCCAGCCTCCA
TACCCAGGATGGTATGATGCAAACGCCCGCTGTGATTACCACGCAGGAGCTATCGGGCATTCTACAGAAAATTGCACACCACTTAAGTACAGAGTCCAAGCGTTGATCAA
GGCAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGACCGTAAAGCCGAACAGGAAAAAACGAGGAAGGATATTGAAGAGCTGCGAGAGAAGTTAGACGCCATCCTCCTCGCCCTTGAAAAGGGGAAGACGATTGC
AGAAACTAGCAATCCAATCCACGAGCCACAAACCCCTCAGTTCCCGCCAGGTTTTGAGCCATCTTTTCGGCCAGCGGGACCGTCTTTCAGGCCAATGACAGAGGGATTTA
TGCCTCAATACACAACGTACAACCCTCTTTATGATATTCCGGCTGGGCAGTTCCCACCTCCGTTGGTCAGGGGAGCTTCGCAAGCTCCAGTCGGCATTATTTTTCAAGAG
CCAGAGCAAGTCATGGCGCCACCTACAGTTCTTAATCTGGGTGGTCCTCAAGCAAATAAGGACCCAGAAAGACAGGAGGCCCCTAGCAGTGAGAAATTAGAGGTTCTGGA
GGAAAGACTGCGAGCAGTAGAGGGAACAGATGTTTTTGGCAACATTGATGCCTCCCAACTATGCTTGCTGTCGGGACTAGTCATCCCTCCAAAGTTCAAAATTCCAGAGT
TTGAGAAGTACAATGGTTCTTCTTGTCCTAAGAACCATCTTATCATGTACTGTAGAAAGATGGCAGCGTATATCCAGAATGACAAGCTATTGATACACTGTTTTCAGGAT
AGTTTGTCTGGCCCGGCTTCCCGTTGGTACATGCATTTAGACAGTGTCCATGTTGGTTCGTGGAAGAATTTGGCTGATTCCTTCCTAAAGCAGTATAAACATAACATAGA
TATGGCGCCCGACCGCTTAGATCTGCAGAGGATGGAGAAAAAAACCATAGAAAGCTTTAAGGAGTACGCTCAAAGATGGCGGGATACAGCTGCTCAGGTCCAACCTCCTT
TGACTGATAAAGAGCTATCTTCCATGTTCATTAACACCCTAAAACATCCTTTTTATGATCGGATGATAGGAAGTGCTTCTACGAGCTTCTCCGATATTTTGACTATTGGA
GAAAGAATTGAATATGGGGTTAAGCATGGTCGAATAACCAGCACTGTTGGAGAATCGTCAACCACAAAGAAGGCGACATCCTCGAAGAAAAATGAAGGTGAGGTGCAAAT
GTATACTACCTCTCAGAATTTTAGACCTCCAGCAAGTCGAGGCTTTCAGCCCAGGGGTTACCAGCAAAATACCGTTTATACTCAGGGGCAGCAGAACAACAGATCGACAC
GTAAGCAATCTCAGTTTGACCCAATTCCAATGACTTACACTGAGCTCCTGCCCCAGTTATTTCAGAATAATCAACTGGCACCGGTACCCGTGGATCCGATCCAGCCTCCA
TACCCAGGATGGTATGATGCAAACGCCCGCTGTGATTACCACGCAGGAGCTATCGGGCATTCTACAGAAAATTGCACACCACTTAAGTACAGAGTCCAAGCGTTGATCAA
GGCAGGATGA
Protein sequenceShow/hide protein sequence
MEDDRKAEQEKTRKDIEELREKLDAILLALEKGKTIAETSNPIHEPQTPQFPPGFEPSFRPAGPSFRPMTEGFMPQYTTYNPLYDIPAGQFPPPLVRGASQAPVGIIFQE
PEQVMAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEERLRAVEGTDVFGNIDASQLCLLSGLVIPPKFKIPEFEKYNGSSCPKNHLIMYCRKMAAYIQNDKLLIHCFQD
SLSGPASRWYMHLDSVHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKTIESFKEYAQRWRDTAAQVQPPLTDKELSSMFINTLKHPFYDRMIGSASTSFSDILTIG
ERIEYGVKHGRITSTVGESSTTKKATSSKKNEGEVQMYTTSQNFRPPASRGFQPRGYQQNTVYTQGQQNNRSTRKQSQFDPIPMTYTELLPQLFQNNQLAPVPVDPIQPP
YPGWYDANARCDYHAGAIGHSTENCTPLKYRVQALIKAG