; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g33110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g33110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:24031833..24039142
RNA-Seq ExpressionMoc08g33110
SyntenyMoc08g33110
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]1.2e-25042.92Show/hide
Query:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----
        MPYVEAAEEA ESSFQSFEIANATTLHGK G+P P LL   FK D  +LDK+LRMA NTK+FGLGYKPSR D +RV++ EK KRL RFENEERDY     
Subjt:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----

Query:  --------QAGLSHLYVVLSGVLG---------------------------NTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH
                 AG  H     S V+                            NTEIECDN+S+Y+L TPIYN+ESD+EI DEPSAELLRMLEEEEK LGPH
Subjt:  --------QAGLSHLYVVLSGVLG---------------------------NTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH

Query:  GESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------------------
         E TE +NLGSQAE KE+KIGT+MS ESR                                                                       
Subjt:  GESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSK
              RLNYIARFISHLTATCEPIFKLLRKNNDG+W E+CQ A DKIKQYL  PPILVPPT GRP ILYL VTENSMGCVLGQHDDSGRKEQAIYYLSK
Subjt:  ------RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSK

Query:  KFTDCETRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFD
        KFTDCETRYS VEKTCCALAW A RLRQY+                          IAR QVLLSEYDIVYVTQKAIKGSALADYLAQQPINDY  +KFD
Subjt:  KFTDCETRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFD

Query:  FPDEYISTITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------
        FPDEYISTIT  EE+LDPQ WTMMFDGASNEL                                                                    
Subjt:  FPDEYISTITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------

Query:  ---------------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASE
                       EL+QEFDE+SFD+LPRE+NQ+ DALATLAVMFN+ELNE++ PIK+ +RDV ASCMSIEEE DG PWFHDIKQY+  KEYP +ASE
Subjt:  ---------------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASE

Query:  NDKRTIRKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------
        NDKRT RKLA  FFLNGEILYKRNHDMVLLRC+E  +AN+IMEE+HEG+C THANGHM+ARQILRAGYYWLT+ TDCIKYARKCHKCQIY+DK       
Subjt:  NDKRTIRKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFV
                                                                                         AKLQEAEWVQRRYEQL+FV
Subjt:  ---------------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFV

Query:  EEKRLTALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF
        EEKRLTALCRGQLYQ RMMKAYD+ V PRRFREGDLVLKRILP QKDHRGKWTPNYEGPF+V+KAFSGGALVL NMDG E  NPV+ DHVR +
Subjt:  EEKRLTALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]2.5e-25643.52Show/hide
Query:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----
        M YVE AEEA ESSFQSFEIANATTLHGK G+P P LL   FK D G+LDK+LRMA NTK+FGLGYKPSR D +RV++ EK KRL RFENEERDY     
Subjt:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----

Query:  --------QAGLSHLYVVLSGVL---------------------------------------GNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLR
                 AG  H     S V+                                        NTEIECDN+S+Y+L TPIY +ESDEEI DEPSAELLR
Subjt:  --------QAGLSHLYVVLSGVL---------------------------------------GNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLR

Query:  MLEEEEKTLGPHGESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------
        MLEEEEK LGPH E TE +NLGSQAE KE+KIGT+MS ESR                                                           
Subjt:  MLEEEEKTLGPHGESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDS
                          RLNYIARFISHLTATCEPIFKLLRKNNDG+  EDCQ AFDK+KQYLQ PP+LVPPT GR LILYLTVTENSMGCVLGQHDDS
Subjt:  ------------------RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDS

Query:  GRKEQAIYYLSKKFTDCETRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQ
        GRKEQAIYYLSKKFTDCETRYS VEKTCCALAWAA RLRQY+                          IARWQVLLSEYDIVYVTQKAIKGSALADYLAQ
Subjt:  GRKEQAIYYLSKKFTDCETRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQ

Query:  QPINDYEAMKFDFPDEYISTITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------
        QPINDY  +KFDFPDEYISTIT  EE+LDPQ WTMMFDGASNEL                                                        
Subjt:  QPINDYEAMKFDFPDEYISTITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------

Query:  ---------------------------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQY
                                   EL+QEFDEISFD+LPRE+NQ+ADALATLAVMFN+ELNE+++PIK+ +RDV ASCMSIEEE DGKPWFHDIKQY
Subjt:  ---------------------------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQY

Query:  VKRKEYPLSASENDKRTIRKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQ
        +K KEYP +ASENDKRT+RKLA  FFLNGEILYKRNHDMVLLRC+E  +AN+IMEEIHEG+CGTHANGHMMARQILRAGYYWLT+ETDCIKYARKCHKCQ
Subjt:  VKRKEYPLSASENDKRTIRKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQ

Query:  IYSDK-----------------------------------------------------------------------------------------------
        IYSDK                                                                                               
Subjt:  IYSDK-----------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------AKLQEAE
                                                                                                     AKLQEAE
Subjt:  ---------------------------------------------------------------------------------------------AKLQEAE

Query:  WVQRRYEQLNFVEEKRLTALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSD
        WVQRRYEQLNFVEEKRLTALCR QLYQRRMMKAYDKKV PRRF+E DLVLKRILP QKDHRGKWTPNYEGPFVV+KAFSGGALVL NMDG E  NPV +D
Subjt:  WVQRRYEQLNFVEEKRLTALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSD

Query:  HVRTF
        HVR +
Subjt:  HVRTF

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]3.2e-25944.24Show/hide
Query:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----
        MPYVEAAEEA ESSFQSFEIANATTLHGK G+P P LL A FK + G+LDK+LRMA NT+RFGLGYKP+R D +RV++ EK KRL RFEN ERDY     
Subjt:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----

Query:  --------QAGLSHLYVVLSGVLG---------------------------NTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH
                 AG  H     S V                             NTEIECDN+S+Y+L TPIYN+ESDEEI DEPSAELLRMLEEEEK LGPH
Subjt:  --------QAGLSHLYVVLSGVLG---------------------------NTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH

Query:  GESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------------------
         E TE +NLGSQAE KE+KIGT+MS ESR                                                                       
Subjt:  GESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------RLNYIARFI
                                                                                                   RLNYIARFI
Subjt:  -------------------------------------------------------------------------------------------RLNYIARFI

Query:  SHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSPVEKT
        SHLTATCEPIFKLL KNNDG+W EDCQ +FDKIKQYLQ PPILVPPT GRPLILYLTVTENS+GCVLGQHDDSGRKEQAIYYLSKKFTDCETRYS VEKT
Subjt:  SHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSPVEKT

Query:  CCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYISTITTDEEN
        CCALAW A RLRQY+                          IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDY  +KFDFPDEYISTIT  EE+
Subjt:  CCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYISTITTDEEN

Query:  LDPQAWTMMFDGASNEL----------------------------------------------------------------------------------E
        LDPQ WTMMFDGASNEL                                                                                  E
Subjt:  LDPQAWTMMFDGASNEL----------------------------------------------------------------------------------E

Query:  LAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTIRKLAANFFLN
        L+QEFDEISFD+LPRE+NQ+ADALATLAVMFN+ELNE+++PIK+ +RDVSASCMSIEEE DG PWFHDIKQY+K KEYP +ASENDKRT+RKLA  FFLN
Subjt:  LAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTIRKLAANFFLN

Query:  GEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-----------------------
         EILYKRNHDMVLLRC+E  +AN+IMEE+HE +CGTHANGHM+ARQILRAGYYWLT+ETDCIKYARKCHKCQIYSDK                       
Subjt:  GEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-----------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLTALCRGQLYQR
                                                                         AKLQEAEWVQRRYEQLNFVEEKRLTAL RGQLYQR
Subjt:  -----------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLTALCRGQLYQR

Query:  RMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF
        RMMKAYDKKV  RRFREGDLVLKRILP QKDHRGKWTPNYEGPFV++KAFSGGALVL NMDG E  NP++SDHVR +
Subjt:  RMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]1.7e-22054.64Show/hide
Query:  RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE
        RLNYIARFISHLTATCEPIFKLLRKNNDG+W EDCQ AF+KIKQYLQ PPILVPPT GRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE
Subjt:  RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE

Query:  TRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYI
        TRYS VEKTCCALAW A RLRQY+                          IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDY  +KFDFPDEYI
Subjt:  TRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYI

Query:  STITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------------
        STIT  EE+LDPQ WTMMFDGASNEL                                                                          
Subjt:  STITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------------

Query:  ---------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTI
                 EL+QEFDEISFD+LPRE+NQ+ADALATLAVMFN+ELNE+++PIK+ +RDV ASCMSIEEE DG PWFHDIKQY+K KEY  +ASENDKRT+
Subjt:  ---------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTI

Query:  RKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------------
        RKLA  FFLNGEILYKRNHDMVLLRC+E  +AN+IMEE+HEG+CGTHANGHMMARQILRAGYYWLT+ETDCIKYARKCHKCQIYSDK             
Subjt:  RKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLT
                                                                                   AKL  AEWVQRRYEQLNFVEEKRLT
Subjt:  ---------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLT

Query:  ALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF
        ALCRGQLYQRRMMKAYD+KV PRRFREGDLVLKRILP QKDHRGKWTPNYEGPFVV+KAFSGGALVL NMDG E  NPV+SDHVR +
Subjt:  ALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]1.2e-21854.38Show/hide
Query:  RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE
        RLNYIAR ISHLTATCEPIFKLLRKNNDG+W EDCQ AFDKIKQYLQ PPILVPPT GRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE
Subjt:  RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE

Query:  TRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYI
        TRYS VEKTCCALAWA  RLRQY+                          IARWQVLLSEYDIVYVT+KAIKGSALADYLAQQPINDY  +KFDFPDEYI
Subjt:  TRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYI

Query:  STITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------------
        STIT  EE+LDPQ WTMMFDGASNEL                                                                          
Subjt:  STITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------------

Query:  ---------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTI
                 EL+QEFDEISFD+LPRE+NQ+ADALATLAVMFN+ELNE++ PIK+ +RDV ASCMSIEEE DG PWFH+IK Y+K KEYP +ASENDKRT+
Subjt:  ---------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTI

Query:  RKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------------
        RKLA  FFLNGEILYKRNHDMVLLRC+E  +AN+IMEE+HEG+CGTHANGHMMARQILRAGYYWLT+ TDCIKYARKCHKCQIYSDK             
Subjt:  RKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLT
                                                                                   AKLQEAEWVQRRYEQLNFVEEKRLT
Subjt:  ---------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLT

Query:  ALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF
        ALCRGQLYQRRMMKAYDKKV PRRFREGDLVLK ILP QKDHRGKWT NYEGPFVV+KAFSGGALVL NMDG E  NPV+SDHVR +
Subjt:  ALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H5.9e-25142.92Show/hide
Query:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----
        MPYVEAAEEA ESSFQSFEIANATTLHGK G+P P LL   FK D  +LDK+LRMA NTK+FGLGYKPSR D +RV++ EK KRL RFENEERDY     
Subjt:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----

Query:  --------QAGLSHLYVVLSGVLG---------------------------NTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH
                 AG  H     S V+                            NTEIECDN+S+Y+L TPIYN+ESD+EI DEPSAELLRMLEEEEK LGPH
Subjt:  --------QAGLSHLYVVLSGVLG---------------------------NTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH

Query:  GESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------------------
         E TE +NLGSQAE KE+KIGT+MS ESR                                                                       
Subjt:  GESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSK
              RLNYIARFISHLTATCEPIFKLLRKNNDG+W E+CQ A DKIKQYL  PPILVPPT GRP ILYL VTENSMGCVLGQHDDSGRKEQAIYYLSK
Subjt:  ------RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSK

Query:  KFTDCETRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFD
        KFTDCETRYS VEKTCCALAW A RLRQY+                          IAR QVLLSEYDIVYVTQKAIKGSALADYLAQQPINDY  +KFD
Subjt:  KFTDCETRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFD

Query:  FPDEYISTITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------
        FPDEYISTIT  EE+LDPQ WTMMFDGASNEL                                                                    
Subjt:  FPDEYISTITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------

Query:  ---------------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASE
                       EL+QEFDE+SFD+LPRE+NQ+ DALATLAVMFN+ELNE++ PIK+ +RDV ASCMSIEEE DG PWFHDIKQY+  KEYP +ASE
Subjt:  ---------------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASE

Query:  NDKRTIRKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------
        NDKRT RKLA  FFLNGEILYKRNHDMVLLRC+E  +AN+IMEE+HEG+C THANGHM+ARQILRAGYYWLT+ TDCIKYARKCHKCQIY+DK       
Subjt:  NDKRTIRKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFV
                                                                                         AKLQEAEWVQRRYEQL+FV
Subjt:  ---------------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFV

Query:  EEKRLTALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF
        EEKRLTALCRGQLYQ RMMKAYD+ V PRRFREGDLVLKRILP QKDHRGKWTPNYEGPF+V+KAFSGGALVL NMDG E  NPV+ DHVR +
Subjt:  EEKRLTALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF

A0A6J1D099 Ribonuclease H1.2e-25643.52Show/hide
Query:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----
        M YVE AEEA ESSFQSFEIANATTLHGK G+P P LL   FK D G+LDK+LRMA NTK+FGLGYKPSR D +RV++ EK KRL RFENEERDY     
Subjt:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----

Query:  --------QAGLSHLYVVLSGVL---------------------------------------GNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLR
                 AG  H     S V+                                        NTEIECDN+S+Y+L TPIY +ESDEEI DEPSAELLR
Subjt:  --------QAGLSHLYVVLSGVL---------------------------------------GNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLR

Query:  MLEEEEKTLGPHGESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------
        MLEEEEK LGPH E TE +NLGSQAE KE+KIGT+MS ESR                                                           
Subjt:  MLEEEEKTLGPHGESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDS
                          RLNYIARFISHLTATCEPIFKLLRKNNDG+  EDCQ AFDK+KQYLQ PP+LVPPT GR LILYLTVTENSMGCVLGQHDDS
Subjt:  ------------------RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDS

Query:  GRKEQAIYYLSKKFTDCETRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQ
        GRKEQAIYYLSKKFTDCETRYS VEKTCCALAWAA RLRQY+                          IARWQVLLSEYDIVYVTQKAIKGSALADYLAQ
Subjt:  GRKEQAIYYLSKKFTDCETRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQ

Query:  QPINDYEAMKFDFPDEYISTITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------
        QPINDY  +KFDFPDEYISTIT  EE+LDPQ WTMMFDGASNEL                                                        
Subjt:  QPINDYEAMKFDFPDEYISTITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------

Query:  ---------------------------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQY
                                   EL+QEFDEISFD+LPRE+NQ+ADALATLAVMFN+ELNE+++PIK+ +RDV ASCMSIEEE DGKPWFHDIKQY
Subjt:  ---------------------------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQY

Query:  VKRKEYPLSASENDKRTIRKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQ
        +K KEYP +ASENDKRT+RKLA  FFLNGEILYKRNHDMVLLRC+E  +AN+IMEEIHEG+CGTHANGHMMARQILRAGYYWLT+ETDCIKYARKCHKCQ
Subjt:  VKRKEYPLSASENDKRTIRKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQ

Query:  IYSDK-----------------------------------------------------------------------------------------------
        IYSDK                                                                                               
Subjt:  IYSDK-----------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------AKLQEAE
                                                                                                     AKLQEAE
Subjt:  ---------------------------------------------------------------------------------------------AKLQEAE

Query:  WVQRRYEQLNFVEEKRLTALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSD
        WVQRRYEQLNFVEEKRLTALCR QLYQRRMMKAYDKKV PRRF+E DLVLKRILP QKDHRGKWTPNYEGPFVV+KAFSGGALVL NMDG E  NPV +D
Subjt:  WVQRRYEQLNFVEEKRLTALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSD

Query:  HVRTF
        HVR +
Subjt:  HVRTF

A0A6J1D7C7 Ribonuclease H1.5e-25944.24Show/hide
Query:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----
        MPYVEAAEEA ESSFQSFEIANATTLHGK G+P P LL A FK + G+LDK+LRMA NT+RFGLGYKP+R D +RV++ EK KRL RFEN ERDY     
Subjt:  MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDY-----

Query:  --------QAGLSHLYVVLSGVLG---------------------------NTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH
                 AG  H     S V                             NTEIECDN+S+Y+L TPIYN+ESDEEI DEPSAELLRMLEEEEK LGPH
Subjt:  --------QAGLSHLYVVLSGVLG---------------------------NTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH

Query:  GESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------------------
         E TE +NLGSQAE KE+KIGT+MS ESR                                                                       
Subjt:  GESTEIVNLGSQAEVKEVKIGTNMSLESR-----------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------RLNYIARFI
                                                                                                   RLNYIARFI
Subjt:  -------------------------------------------------------------------------------------------RLNYIARFI

Query:  SHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSPVEKT
        SHLTATCEPIFKLL KNNDG+W EDCQ +FDKIKQYLQ PPILVPPT GRPLILYLTVTENS+GCVLGQHDDSGRKEQAIYYLSKKFTDCETRYS VEKT
Subjt:  SHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSPVEKT

Query:  CCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYISTITTDEEN
        CCALAW A RLRQY+                          IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDY  +KFDFPDEYISTIT  EE+
Subjt:  CCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYISTITTDEEN

Query:  LDPQAWTMMFDGASNEL----------------------------------------------------------------------------------E
        LDPQ WTMMFDGASNEL                                                                                  E
Subjt:  LDPQAWTMMFDGASNEL----------------------------------------------------------------------------------E

Query:  LAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTIRKLAANFFLN
        L+QEFDEISFD+LPRE+NQ+ADALATLAVMFN+ELNE+++PIK+ +RDVSASCMSIEEE DG PWFHDIKQY+K KEYP +ASENDKRT+RKLA  FFLN
Subjt:  LAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTIRKLAANFFLN

Query:  GEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-----------------------
         EILYKRNHDMVLLRC+E  +AN+IMEE+HE +CGTHANGHM+ARQILRAGYYWLT+ETDCIKYARKCHKCQIYSDK                       
Subjt:  GEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-----------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLTALCRGQLYQR
                                                                         AKLQEAEWVQRRYEQLNFVEEKRLTAL RGQLYQR
Subjt:  -----------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLTALCRGQLYQR

Query:  RMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF
        RMMKAYDKKV  RRFREGDLVLKRILP QKDHRGKWTPNYEGPFV++KAFSGGALVL NMDG E  NP++SDHVR +
Subjt:  RMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF

A0A6J1DZ90 Ribonuclease H8.3e-22154.64Show/hide
Query:  RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE
        RLNYIARFISHLTATCEPIFKLLRKNNDG+W EDCQ AF+KIKQYLQ PPILVPPT GRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE
Subjt:  RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE

Query:  TRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYI
        TRYS VEKTCCALAW A RLRQY+                          IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDY  +KFDFPDEYI
Subjt:  TRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYI

Query:  STITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------------
        STIT  EE+LDPQ WTMMFDGASNEL                                                                          
Subjt:  STITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------------

Query:  ---------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTI
                 EL+QEFDEISFD+LPRE+NQ+ADALATLAVMFN+ELNE+++PIK+ +RDV ASCMSIEEE DG PWFHDIKQY+K KEY  +ASENDKRT+
Subjt:  ---------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTI

Query:  RKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------------
        RKLA  FFLNGEILYKRNHDMVLLRC+E  +AN+IMEE+HEG+CGTHANGHMMARQILRAGYYWLT+ETDCIKYARKCHKCQIYSDK             
Subjt:  RKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLT
                                                                                   AKL  AEWVQRRYEQLNFVEEKRLT
Subjt:  ---------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLT

Query:  ALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF
        ALCRGQLYQRRMMKAYD+KV PRRFREGDLVLKRILP QKDHRGKWTPNYEGPFVV+KAFSGGALVL NMDG E  NPV+SDHVR +
Subjt:  ALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF

A0A6J1E2J7 Ribonuclease H6.0e-21954.38Show/hide
Query:  RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE
        RLNYIAR ISHLTATCEPIFKLLRKNNDG+W EDCQ AFDKIKQYLQ PPILVPPT GRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE
Subjt:  RLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCE

Query:  TRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYI
        TRYS VEKTCCALAWA  RLRQY+                          IARWQVLLSEYDIVYVT+KAIKGSALADYLAQQPINDY  +KFDFPDEYI
Subjt:  TRYSPVEKTCCALAWAAHRLRQYI--------------------------IARWQVLLSEYDIVYVTQKAIKGSALADYLAQQPINDYEAMKFDFPDEYI

Query:  STITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------------
        STIT  EE+LDPQ WTMMFDGASNEL                                                                          
Subjt:  STITTDEENLDPQAWTMMFDGASNEL--------------------------------------------------------------------------

Query:  ---------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTI
                 EL+QEFDEISFD+LPRE+NQ+ADALATLAVMFN+ELNE++ PIK+ +RDV ASCMSIEEE DG PWFH+IK Y+K KEYP +ASENDKRT+
Subjt:  ---------ELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVSASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTI

Query:  RKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------------
        RKLA  FFLNGEILYKRNHDMVLLRC+E  +AN+IMEE+HEG+CGTHANGHMMARQILRAGYYWLT+ TDCIKYARKCHKCQIYSDK             
Subjt:  RKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETDCIKYARKCHKCQIYSDK-------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLT
                                                                                   AKLQEAEWVQRRYEQLNFVEEKRLT
Subjt:  ---------------------------------------------------------------------------AKLQEAEWVQRRYEQLNFVEEKRLT

Query:  ALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF
        ALCRGQLYQRRMMKAYDKKV PRRFREGDLVLK ILP QKDHRGKWT NYEGPFVV+KAFSGGALVL NMDG E  NPV+SDHVR +
Subjt:  ALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLINMDGDELANPVSSDHVRTF

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.2e-0623.77Show/hide
Query:  QAGLSHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRL
        +A  SH+   +  +L +++ E ++    K V  +  +++   II++   E     + + K +G H    G +    N+    + K+ K    +      +
Subjt:  QAGLSHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRL

Query:  NYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCET
        NY+ +FI   +    P+  LL+K+    W      A + IKQ L SPP+L      + ++L    ++ ++G VL Q HDD   K   + Y S K +  + 
Subjt:  NYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCET

Query:  RYSPVEKTCCALAWAAHRLRQYI
         YS  +K   A+  +    R Y+
Subjt:  RYSPVEKTCCALAWAAHRLRQYI

P0CT35 Transposon Tf2-2 polyprotein1.2e-0623.77Show/hide
Query:  QAGLSHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRL
        +A  SH+   +  +L +++ E ++    K V  +  +++   II++   E     + + K +G H    G +    N+    + K+ K    +      +
Subjt:  QAGLSHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRL

Query:  NYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCET
        NY+ +FI   +    P+  LL+K+    W      A + IKQ L SPP+L      + ++L    ++ ++G VL Q HDD   K   + Y S K +  + 
Subjt:  NYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCET

Query:  RYSPVEKTCCALAWAAHRLRQYI
         YS  +K   A+  +    R Y+
Subjt:  RYSPVEKTCCALAWAAHRLRQYI

P0CT36 Transposon Tf2-3 polyprotein1.2e-0623.77Show/hide
Query:  QAGLSHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRL
        +A  SH+   +  +L +++ E ++    K V  +  +++   II++   E     + + K +G H    G +    N+    + K+ K    +      +
Subjt:  QAGLSHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRL

Query:  NYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCET
        NY+ +FI   +    P+  LL+K+    W      A + IKQ L SPP+L      + ++L    ++ ++G VL Q HDD   K   + Y S K +  + 
Subjt:  NYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCET

Query:  RYSPVEKTCCALAWAAHRLRQYI
         YS  +K   A+  +    R Y+
Subjt:  RYSPVEKTCCALAWAAHRLRQYI

P0CT41 Transposon Tf2-12 polyprotein1.2e-0623.77Show/hide
Query:  QAGLSHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRL
        +A  SH+   +  +L +++ E ++    K V  +  +++   II++   E     + + K +G H    G +    N+    + K+ K    +      +
Subjt:  QAGLSHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRL

Query:  NYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCET
        NY+ +FI   +    P+  LL+K+    W      A + IKQ L SPP+L      + ++L    ++ ++G VL Q HDD   K   + Y S K +  + 
Subjt:  NYIARFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCET

Query:  RYSPVEKTCCALAWAAHRLRQYI
         YS  +K   A+  +    R Y+
Subjt:  RYSPVEKTCCALAWAAHRLRQYI

Q9UR07 Transposon Tf2-11 polyprotein1.2e-0623.74Show/hide
Query:  SHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRLNYIA
        SH+   +  +L +++ E ++    K V  +  +++   II++   E     + + K +G H    G +    N+    + K+ K    +      +NY+ 
Subjt:  SHLYVVLSGVLGNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPH----GESTEIVNLGSQAEVKEVKIGTNMSLESRRLNYIA

Query:  RFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCETRYSP
        +FI   +    P+  LL+K+    W      A + IKQ L SPP+L      + ++L    ++ ++G VL Q HDD   K   + Y S K +  +  YS 
Subjt:  RFISHLTATCEPIFKLLRKNNDGIWGEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQ-HDDSGRKEQAIYYLSKKFTDCETRYSP

Query:  VEKTCCALAWAAHRLRQYI
         +K   A+  +    R Y+
Subjt:  VEKTCCALAWAAHRLRQYI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTATGTAGAGGCAGCAGAAGAGGCTCATGAATCTTCATTCCAGTCATTTGAGATTGCAAATGCAACAACCTTACATGGGAAAAGTGGGAAACCTAGTCCACACTT
ATTAAACGCTACCTTTAAGAAAGATGGGGGCAATTTGGACAAAATGCTAAGGATGGCAAATAACACAAAAAGATTTGGGTTGGGGTACAAGCCAAGCAGAAAAGACTTCG
TTAGAGTGCAGAACCATGAGAAAACTAAGCGCTTGATCAGATTTGAGAATGAAGAGCGAGACTACCAGGCAGGACTGTCCCACCTCTATGTTGTTCTTTCAGGAGTGCTG
GGTAATACTGAGATCGAATGTGATAATAATTCAAGATACAAGCTTGTCACACCGATATACAATGTCGAGTCGGATGAGGAAATAATTGATGAGCCATCAGCTGAGTTGTT
AAGAATGTTGGAAGAAGAAGAAAAGACGTTGGGACCCCATGGGGAGTCAACTGAGATAGTTAACTTGGGATCGCAAGCCGAGGTCAAAGAAGTAAAAATTGGCACGAACA
TGTCTTTAGAAAGTCGACGACTCAATTACATCGCGAGATTCATTTCCCACCTGACGGCAACTTGCGAGCCCATTTTCAAATTGCTCCGCAAGAACAACGACGGGATATGG
GGCGAGGATTGCCAAGTAGCATTTGACAAGATTAAGCAATATTTGCAGAGTCCTCCAATTCTTGTGCCACCAACTTCAGGTCGACCCCTCATTTTATATCTCACGGTGAC
GGAAAACTCCATGGGATGTGTGCTGGGGCAGCATGATGATTCAGGCAGGAAGGAGCAGGCCATATACTACTTAAGTAAGAAGTTCACCGATTGCGAGACTAGATACTCTC
CCGTAGAAAAGACTTGTTGTGCTCTAGCTTGGGCTGCCCATCGTCTTAGACAATATATAATTGCAAGATGGCAAGTACTCTTATCCGAGTACGATATTGTCTATGTAACT
CAAAAGGCAATTAAGGGGAGTGCTCTAGCTGACTACCTAGCCCAACAACCCATAAACGACTATGAAGCAATGAAGTTCGACTTCCCAGACGAGTATATCTCCACCATAAC
CACAGATGAAGAAAATTTAGACCCACAAGCATGGACTATGATGTTTGATGGTGCTTCTAACGAGCTAGAATTGGCGCAGGAGTTTGATGAAATCTCATTCGATCACTTAC
CAAGAGAAAGCAATCAGATGGCAGATGCACTGGCAACATTAGCAGTTATGTTCAATATAGAACTCAACGAGGAGATTCAACCGATTAAAATTGAGAAAAGAGACGTCTCA
GCCTCTTGCATGAGTATTGAGGAAGAGTTTGATGGCAAACCGTGGTTTCATGACATCAAGCAGTACGTCAAGCGCAAAGAGTATCCTCTCAGCGCCTCAGAAAATGATAA
ACGCACCATTCGCAAGTTGGCAGCAAATTTTTTCTTAAATGGAGAGATCCTGTACAAGAGAAACCACGACATGGTTCTCCTAAGATGCCTCGAGAAAATAGAGGCCAATA
AGATTATGGAGGAAATTCATGAAGGGATATGTGGCACTCATGCAAATGGGCATATGATGGCTAGACAAATTTTGAGAGCTGGCTATTACTGGTTGACAATGGAAACAGAC
TGCATTAAATATGCAAGGAAGTGCCATAAATGTCAAATTTATTCAGACAAAGCTAAGTTACAAGAGGCCGAATGGGTTCAAAGACGCTACGAGCAGTTGAACTTTGTGGA
AGAAAAGAGATTGACAGCATTATGCAGAGGACAACTCTATCAAAGAAGGATGATGAAGGCCTATGACAAGAAGGTACGCCCAAGAAGATTCAGAGAGGGAGATTTGGTTC
TTAAAAGAATTCTCCCATTTCAGAAAGATCACCGAGGCAAATGGACCCCGAATTATGAAGGACCATTCGTGGTGAGAAAAGCCTTCTCCGGAGGAGCACTAGTTCTGATC
AACATGGACGGCGACGAGTTGGCAAATCCAGTCAGTTCAGACCATGTCCGAACCTTCCAGCCCGACGACACCTGCAGCGGCACCCCGCAAGCCCGGCAGCTTCAGATCCG
GCCACCATCAGCTACCAACTCTGGCCGTACTCCGACGAGTAAGGCCCACGACGACGGCACTCGATCCGCACCCTCGGCAACCCTGCGCCGCGACACGCCTGATTCAACCC
GAGCACCTTCACCGGCGATTGACGACCTTCCCTGCGCAGCAGCTCCAGCCCGGCGGCCCGACAGCAACGGCGGCGTGACACGAACAGCGGCGATTTCCCCCTGCAGCAAC
CTCCGACCAGCGAACCTCCTGGCTTCGGATCCAGCCCGCGCACAACAACTCCGCGACCCACGATCCGTGTGTAAAGCTCCGACGACTCGCGTGAAGACCTCGGACCCGAC
GAACAGAGGATGTGACGTTTCTGAATATGCTGCAGAAATTATACGGGTAGATGAAGAAGGAGCATTCAAAGATTTATCGAAAGTTTTCACTCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTATGTAGAGGCAGCAGAAGAGGCTCATGAATCTTCATTCCAGTCATTTGAGATTGCAAATGCAACAACCTTACATGGGAAAAGTGGGAAACCTAGTCCACACTT
ATTAAACGCTACCTTTAAGAAAGATGGGGGCAATTTGGACAAAATGCTAAGGATGGCAAATAACACAAAAAGATTTGGGTTGGGGTACAAGCCAAGCAGAAAAGACTTCG
TTAGAGTGCAGAACCATGAGAAAACTAAGCGCTTGATCAGATTTGAGAATGAAGAGCGAGACTACCAGGCAGGACTGTCCCACCTCTATGTTGTTCTTTCAGGAGTGCTG
GGTAATACTGAGATCGAATGTGATAATAATTCAAGATACAAGCTTGTCACACCGATATACAATGTCGAGTCGGATGAGGAAATAATTGATGAGCCATCAGCTGAGTTGTT
AAGAATGTTGGAAGAAGAAGAAAAGACGTTGGGACCCCATGGGGAGTCAACTGAGATAGTTAACTTGGGATCGCAAGCCGAGGTCAAAGAAGTAAAAATTGGCACGAACA
TGTCTTTAGAAAGTCGACGACTCAATTACATCGCGAGATTCATTTCCCACCTGACGGCAACTTGCGAGCCCATTTTCAAATTGCTCCGCAAGAACAACGACGGGATATGG
GGCGAGGATTGCCAAGTAGCATTTGACAAGATTAAGCAATATTTGCAGAGTCCTCCAATTCTTGTGCCACCAACTTCAGGTCGACCCCTCATTTTATATCTCACGGTGAC
GGAAAACTCCATGGGATGTGTGCTGGGGCAGCATGATGATTCAGGCAGGAAGGAGCAGGCCATATACTACTTAAGTAAGAAGTTCACCGATTGCGAGACTAGATACTCTC
CCGTAGAAAAGACTTGTTGTGCTCTAGCTTGGGCTGCCCATCGTCTTAGACAATATATAATTGCAAGATGGCAAGTACTCTTATCCGAGTACGATATTGTCTATGTAACT
CAAAAGGCAATTAAGGGGAGTGCTCTAGCTGACTACCTAGCCCAACAACCCATAAACGACTATGAAGCAATGAAGTTCGACTTCCCAGACGAGTATATCTCCACCATAAC
CACAGATGAAGAAAATTTAGACCCACAAGCATGGACTATGATGTTTGATGGTGCTTCTAACGAGCTAGAATTGGCGCAGGAGTTTGATGAAATCTCATTCGATCACTTAC
CAAGAGAAAGCAATCAGATGGCAGATGCACTGGCAACATTAGCAGTTATGTTCAATATAGAACTCAACGAGGAGATTCAACCGATTAAAATTGAGAAAAGAGACGTCTCA
GCCTCTTGCATGAGTATTGAGGAAGAGTTTGATGGCAAACCGTGGTTTCATGACATCAAGCAGTACGTCAAGCGCAAAGAGTATCCTCTCAGCGCCTCAGAAAATGATAA
ACGCACCATTCGCAAGTTGGCAGCAAATTTTTTCTTAAATGGAGAGATCCTGTACAAGAGAAACCACGACATGGTTCTCCTAAGATGCCTCGAGAAAATAGAGGCCAATA
AGATTATGGAGGAAATTCATGAAGGGATATGTGGCACTCATGCAAATGGGCATATGATGGCTAGACAAATTTTGAGAGCTGGCTATTACTGGTTGACAATGGAAACAGAC
TGCATTAAATATGCAAGGAAGTGCCATAAATGTCAAATTTATTCAGACAAAGCTAAGTTACAAGAGGCCGAATGGGTTCAAAGACGCTACGAGCAGTTGAACTTTGTGGA
AGAAAAGAGATTGACAGCATTATGCAGAGGACAACTCTATCAAAGAAGGATGATGAAGGCCTATGACAAGAAGGTACGCCCAAGAAGATTCAGAGAGGGAGATTTGGTTC
TTAAAAGAATTCTCCCATTTCAGAAAGATCACCGAGGCAAATGGACCCCGAATTATGAAGGACCATTCGTGGTGAGAAAAGCCTTCTCCGGAGGAGCACTAGTTCTGATC
AACATGGACGGCGACGAGTTGGCAAATCCAGTCAGTTCAGACCATGTCCGAACCTTCCAGCCCGACGACACCTGCAGCGGCACCCCGCAAGCCCGGCAGCTTCAGATCCG
GCCACCATCAGCTACCAACTCTGGCCGTACTCCGACGAGTAAGGCCCACGACGACGGCACTCGATCCGCACCCTCGGCAACCCTGCGCCGCGACACGCCTGATTCAACCC
GAGCACCTTCACCGGCGATTGACGACCTTCCCTGCGCAGCAGCTCCAGCCCGGCGGCCCGACAGCAACGGCGGCGTGACACGAACAGCGGCGATTTCCCCCTGCAGCAAC
CTCCGACCAGCGAACCTCCTGGCTTCGGATCCAGCCCGCGCACAACAACTCCGCGACCCACGATCCGTGTGTAAAGCTCCGACGACTCGCGTGAAGACCTCGGACCCGAC
GAACAGAGGATGTGACGTTTCTGAATATGCTGCAGAAATTATACGGGTAGATGAAGAAGGAGCATTCAAAGATTTATCGAAAGTTTTCACTCACTAA
Protein sequenceShow/hide protein sequence
MPYVEAAEEAHESSFQSFEIANATTLHGKSGKPSPHLLNATFKKDGGNLDKMLRMANNTKRFGLGYKPSRKDFVRVQNHEKTKRLIRFENEERDYQAGLSHLYVVLSGVL
GNTEIECDNNSRYKLVTPIYNVESDEEIIDEPSAELLRMLEEEEKTLGPHGESTEIVNLGSQAEVKEVKIGTNMSLESRRLNYIARFISHLTATCEPIFKLLRKNNDGIW
GEDCQVAFDKIKQYLQSPPILVPPTSGRPLILYLTVTENSMGCVLGQHDDSGRKEQAIYYLSKKFTDCETRYSPVEKTCCALAWAAHRLRQYIIARWQVLLSEYDIVYVT
QKAIKGSALADYLAQQPINDYEAMKFDFPDEYISTITTDEENLDPQAWTMMFDGASNELELAQEFDEISFDHLPRESNQMADALATLAVMFNIELNEEIQPIKIEKRDVS
ASCMSIEEEFDGKPWFHDIKQYVKRKEYPLSASENDKRTIRKLAANFFLNGEILYKRNHDMVLLRCLEKIEANKIMEEIHEGICGTHANGHMMARQILRAGYYWLTMETD
CIKYARKCHKCQIYSDKAKLQEAEWVQRRYEQLNFVEEKRLTALCRGQLYQRRMMKAYDKKVRPRRFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVRKAFSGGALVLI
NMDGDELANPVSSDHVRTFQPDDTCSGTPQARQLQIRPPSATNSGRTPTSKAHDDGTRSAPSATLRRDTPDSTRAPSPAIDDLPCAAAPARRPDSNGGVTRTAAISPCSN
LRPANLLASDPARAQQLRDPRSVCKAPTTRVKTSDPTNRGCDVSEYAAEIIRVDEEGAFKDLSKVFTH