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Moc08g33130 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g33130
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 reverse transcriptase-like
Genome locationchr8:24056020..24058228
RNA-Seq ExpressionMoc08g33130
SyntenyMoc08g33130
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.7e-2626.97Show/hide
Query:  ENSGFFHRILATKKRQGTISEILSFQGHSLLQDSEIEAEFLSFYKSLYSWRQ--DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAK
        E +  F  I  T      I++ L+ +    L D+  E++ ++F K     RQ  +  LIANE +D W++ + +G V+KL++EKAFDK++W F+  +L  K
Subjt:  ENSGFFHRILATKKRQGTISEILSFQGHSLLQDSEIEAEFLSFYKSLYSWRQ--DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAK

Query:  --------------------------------------------------VMDRLSRLLHHGSIERHLSGYSKDGSFHINHLQFAADDTLVFSSAEPIHI
                                                           MD LSRLL++ + +R ++G     + ++ H+ F ADD L+F      ++
Subjt:  --------------------------------------------------VMDRLSRLLHHGSIERHLSGYSKDGSFHINHLQFAADDTLVFSSAEPIHI

Query:  RNLATTIKIFEEASGFNINLQQIRDF--------------------GH-----------KQYKSLSFWHTIIERVENKLQKW----------VTLIQAVL
         NL   + +FE ASG NINL +   F                    GH            +  S +FW  ++++++ KL  W          +TLI + L
Subjt:  RNLATTIKIFEEASGFNINLQQIRDF--------------------GH-----------KQYKSLSFWHTIIERVENKLQKW----------VTLIQAVL

Query:  SNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL
         +LP Y +S+ ++PKG A  +E   RNFLW G   G N+ L+ W ++  P ++ GL
Subjt:  SNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL

RVW55331.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.1e-2631.32Show/hide
Query:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFL-------------IVILKAKVMDRLSRLLHHGSIERHLSGYSKDG-SFHINHLQFAADDTL
        D SL+ANE+ID W   + KGL+ KL++EKA+D ++W+FL             + IL  +V+  L R    G        + + G   +++HL F ADDT+
Subjt:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFL-------------IVILKAKVMDRLSRLLHHGSIERHLSGYSKDG-SFHINHLQFAADDTL

Query:  VFSSAEPIHIRNLATTIKIFEEASGFNINL---------------QQIRDFGHK---------------QYKSLSFWHTIIERVENKLQKW---------
        +F  AE   + NL+  +  FE ASG  INL               +   + G +                +K+ S W  + ER+  +L +W         
Subjt:  VFSSAEPIHIRNLATTIKIFEEASGFNINL---------------QQIRDFGHK---------------QYKSLSFWHTIIERVENKLQKW---------

Query:  -VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL
         +TLI++ L+++P Y+LSL+ IPK     +E+I R+FLW G +L    HL+ W+ V  P ++ GL
Subjt:  -VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL

RVW96808.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.4e-2632.51Show/hide
Query:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAKVMDRLSR-----LLHHGSIERHLSGYSKD--------------GSFHINHLQFA
        D  LIANE++D+ + +  +G+V K++ EKA+D VDW FL  +L+ K   +  R      L   S    ++G +K                 F    +   
Subjt:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAKVMDRLSR-----LLHHGSIERHLSGYSKD--------------GSFHINHLQFA

Query:  ADDTLVFSSAEPIHIRNLATTIKIFEEASGFNINLQQIRDFG---HKQYKSLSFWHTIIERVENKLQKW----------VTLIQAVLSNLPTYYLSLLEI
         +DT+ FS A   H++NL   + +F + SG  INL++    G       K++ FW  ++ER+  +L  W          +TLIQ+ LS++P+Y+LSL +I
Subjt:  ADDTLVFSSAEPIHIRNLATTIKIFEEASGFNINLQQIRDFG---HKQYKSLSFWHTIIERVENKLQKW----------VTLIQAVLSNLPTYYLSLLEI

Query:  PKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL
        P   A+ +E++ RNFLW G   G   HLV W  V  P +  GL
Subjt:  PKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]3.3e-2630.07Show/hide
Query:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAK-----------------------VMDRLSRLLHHGSIERHLSG-YSKDGSFHIN
        D  L+ANE++++ +    KGLV K++ EKA+D V+W+F+  +L  K                       V D LSR++        + G  S      ++
Subjt:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAK-----------------------VMDRLSRLLHHGSIERHLSG-YSKDGSFHIN

Query:  HLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNIN------------LQQIRDFGHK-------------------QYKSLSFWHTIIERVENKLQ
        HLQF ADDT+ F   +  +  NL   +K+F + SG  IN            ++ + +                         ++L+FW+ ++++VE +LQ
Subjt:  HLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNIN------------LQQIRDFGHK-------------------QYKSLSFWHTIIERVENKLQ

Query:  KW----------VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL
        +W          +TLIQAVLS++P+YY+SL ++P G    +E+++RNFLWEG + G N HLV W +V    ++ GL
Subjt:  KW----------VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL

XP_009760163.1 PREDICTED: uncharacterized protein LOC104212559, partial [Nicotiana sylvestris]2.6e-2631.19Show/hide
Query:  GFFHRILAT---KKRQGTISEILSFQGHSLLQDSEIEAEFLSFYKSLYSWRQDQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAKVM
        G  ++I+AT   ++ +G I +++S  GH   Q++ I+   ++          D +LIANE++D     R  GL+LKL++EKAFDK+ W +L  IL+    
Subjt:  GFFHRILAT---KKRQGTISEILSFQGHSLLQDSEIEAEFLSFYKSLYSWRQDQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAKVM

Query:  DRLSRLLHHGSIERHLSGYSKDGSFHINHLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNI--------------NLQQIRD-------------
                         G+ ++GS  ++     ++DTL+F  AE   + +L  T+ +FE   G +I              NL ++ D             
Subjt:  DRLSRLLHHGSIERHLSGYSKDGSFHINHLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNI--------------NLQQIRD-------------

Query:  ----FGHKQYKSLSFWHTIIE-RVENKLQKW----------VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPI
             G K YKS   W+ ++E + E KL  W          +TLI +VL ++PTY+++L  IP      L+RI RNFLWEG  +   +HLV W KV LP 
Subjt:  ----FGHKQYKSLSFWHTIIE-RVENKLQKW----------VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPI

Query:  DQVGLVVDWLA
           GL V  LA
Subjt:  DQVGLVVDWLA

TrEMBL top hitse value%identityAlignment
A0A1U7V1A2 uncharacterized protein LOC1042125591.2e-2631.19Show/hide
Query:  GFFHRILAT---KKRQGTISEILSFQGHSLLQDSEIEAEFLSFYKSLYSWRQDQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAKVM
        G  ++I+AT   ++ +G I +++S  GH   Q++ I+   ++          D +LIANE++D     R  GL+LKL++EKAFDK+ W +L  IL+    
Subjt:  GFFHRILAT---KKRQGTISEILSFQGHSLLQDSEIEAEFLSFYKSLYSWRQDQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAKVM

Query:  DRLSRLLHHGSIERHLSGYSKDGSFHINHLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNI--------------NLQQIRD-------------
                         G+ ++GS  ++     ++DTL+F  AE   + +L  T+ +FE   G +I              NL ++ D             
Subjt:  DRLSRLLHHGSIERHLSGYSKDGSFHINHLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNI--------------NLQQIRD-------------

Query:  ----FGHKQYKSLSFWHTIIE-RVENKLQKW----------VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPI
             G K YKS   W+ ++E + E KL  W          +TLI +VL ++PTY+++L  IP      L+RI RNFLWEG  +   +HLV W KV LP 
Subjt:  ----FGHKQYKSLSFWHTIIE-RVENKLQKW----------VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPI

Query:  DQVGLVVDWLA
           GL V  LA
Subjt:  DQVGLVVDWLA

A0A2N9ELQ5 Uncharacterized protein5.6e-2733.45Show/hide
Query:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAK-----------------------VMDRLSRLLHHGSIERHLSGYSKDGSFH---
        D  LIANE +D    + + G++ KL+LEKA+D V+WDFL  +L++                        VM+ LSR+L        LSG++   + +   
Subjt:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAK-----------------------VMDRLSRLLHHGSIERHLSGYSKDGSFH---

Query:  -INHLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNIN--------------LQQIRD-----------------FGHKQYKSLSFWHTIIERVEN
         I+HL F ADDTL+F  A+  HI +L + +  FE  SG  +N              L+++ D                  G K +KSL  W+ I+E++E 
Subjt:  -INHLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNIN--------------LQQIRD-----------------FGHKQYKSLSFWHTIIERVEN

Query:  KLQKW----------VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGLVV
        +L  W          +TLI++ LSNLPTY+LSL  IP   A  +E+I RNFLW      G  HLV W +V  P    GL +
Subjt:  KLQKW----------VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGLVV

A0A2N9FH05 Uncharacterized protein3.3e-2728.35Show/hide
Query:  EGDENSGFFHRILATKKRQGTISEILSFQGHSLLQDSEIEAEFLSFYKSLY-----------------------SW------------------------
        EGD+NS FFHRI  + +   TIS+++   G       EI      FY+ LY                       +W                        
Subjt:  EGDENSGFFHRILATKKRQGTISEILSFQGHSLLQDSEIEAEFLSFYKSLY-----------------------SW------------------------

Query:  ----RQ--DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAK-----------------------VMDRLSRLLHHGSIERHLSGYSK
            RQ  D  LIANE +D    +   G++ KL+LEKA+D V+W FL+ +L++                        +M+ LSR++        LSG++ 
Subjt:  ----RQ--DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAK-----------------------VMDRLSRLLHHGSIERHLSGYSK

Query:  DGS----FHINHLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNINLQQ-----------IRDFGH-------------------KQYKSLSFWHT
         G+      I+HL F ADDTL+F  A+P HI +L + +  FE  SG  +NL +           + D  +                    ++KS   W+ 
Subjt:  DGS----FHINHLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNINLQQ-----------IRDFGH-------------------KQYKSLSFWHT

Query:  IIERVENKLQKWV----------TLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGLVV
        I+E++E +L  W+          TLI++ LSNL TY+LSL  I    A  +E+I RNFLW      G  HLV W  +  P  + GL +
Subjt:  IIERVENKLQKWV----------TLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGLVV

A0A2N9HUI8 Uncharacterized protein1.3e-2835.06Show/hide
Query:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAKVMDRLSRLLHHGSIERHLSGYSKDGSFHINHLQFAADDTLVFSSAEPIHIRNLA
        D  LI +E +D        G++ KL++EKA+D V+W FL+ +L++++MD   R ++ G     + G S+     I+HL F ADDTL+F  A+P  + +L 
Subjt:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAKVMDRLSRLLHHGSIERHLSGYSKDGSFHINHLQFAADDTLVFSSAEPIHIRNLA

Query:  TTIKIFEEASGFNINL-----------QQIRDFG-------------------HKQYKSLSFWHTIIERVENKLQKW----------VTLIQAVLSNLPT
        +    FE  SG  INL             + D                        +K+ S W+ IIER+E +L  W          VTLI++ LS+LPT
Subjt:  TTIKIFEEASGFNINL-----------QQIRDFG-------------------HKQYKSLSFWHTIIERVENKLQKW----------VTLIQAVLSNLPT

Query:  YYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL
        Y+LSL  IP G A+ LE+I R+FLW G       HLV+W K+  PI   GL
Subjt:  YYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL

A0A438F5T6 Transposon TX1 uncharacterized 149 kDa protein5.6e-2731.32Show/hide
Query:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFL-------------IVILKAKVMDRLSRLLHHGSIERHLSGYSKDG-SFHINHLQFAADDTL
        D SL+ANE+ID W   + KGL+ KL++EKA+D ++W+FL             + IL  +V+  L R    G        + + G   +++HL F ADDT+
Subjt:  DQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFL-------------IVILKAKVMDRLSRLLHHGSIERHLSGYSKDG-SFHINHLQFAADDTL

Query:  VFSSAEPIHIRNLATTIKIFEEASGFNINL---------------QQIRDFGHK---------------QYKSLSFWHTIIERVENKLQKW---------
        +F  AE   + NL+  +  FE ASG  INL               +   + G +                +K+ S W  + ER+  +L +W         
Subjt:  VFSSAEPIHIRNLATTIKIFEEASGFNINL---------------QQIRDFGHK---------------QYKSLSFWHTIIERVENKLQKW---------

Query:  -VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL
         +TLI++ L+++P Y+LSL+ IPK     +E+I R+FLW G +L    HL+ W+ V  P ++ GL
Subjt:  -VTLIQAVLSNLPTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACAAATATGGTACTTGAGGGAGACGAGAACTCGGGTTTCTTCCACCGAATCTTAGCTACGAAGAAAAGGCAAGGCACTATTTCTGAAATTCTTTCTTTTCAGGG
ACATAGCCTTCTACAAGACAGTGAAATTGAGGCTGAATTTTTATCCTTTTACAAGAGCCTATATTCTTGGAGGCAAGACCAAAGCTTAATTGCCAATGAGATTATTGATG
ATTGGAAAGCGAACAGGAGTAAAGGGCTTGTTCTTAAACTGGAACTCGAGAAAGCATTTGATAAAGTCGATTGGGACTTCCTAATCGTCATTCTCAAGGCCAAAGTAATG
GACCGTCTTAGCCGTCTTCTTCATCATGGATCCATTGAGAGACATCTATCGGGTTATTCCAAGGATGGTTCTTTCCATATCAACCACCTTCAGTTTGCAGCAGACGATAC
GCTTGTCTTCTCCTCTGCTGAGCCCATACACATCAGAAACTTAGCCACAACTATTAAAATCTTTGAGGAAGCTTCTGGCTTTAATATAAATTTACAACAAATCAGAGATT
TTGGGCATAAACAGTACAAATCTTTGTCTTTCTGGCACACTATTATTGAGAGAGTGGAGAATAAGCTACAGAAATGGGTTACTCTAATCCAAGCTGTACTCTCCAACCTC
CCAACATACTACCTCTCCCTTCTTGAAATTCCAAAGGGAGCTGCCAATTTACTGGAGAGAATTCTTAGAAATTTCCTTTGGGAAGGCCCTAAGTTGGGTGGTAATCTACA
CCTTGTGAACTGGAGAAAAGTCCAGCTCCCTATTGATCAAGTCGGTTTGGTGGTAGATTGGCTAGCTTCTGGAATGACAAATGAGCATCAAACACCTCCTTGGGAGAGGA
CTTCCCCCCAGCTTCACTCGCTCTCTACAAAGAAAGATGCAAAGGTTAGCGGATATGGGATCAATCCACAGCTTCATGGATTTACCATTTCCGTAGACCGCTCAAAGAGG
AGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAACAAATATGGTACTTGAGGGAGACGAGAACTCGGGTTTCTTCCACCGAATCTTAGCTACGAAGAAAAGGCAAGGCACTATTTCTGAAATTCTTTCTTTTCAGGG
ACATAGCCTTCTACAAGACAGTGAAATTGAGGCTGAATTTTTATCCTTTTACAAGAGCCTATATTCTTGGAGGCAAGACCAAAGCTTAATTGCCAATGAGATTATTGATG
ATTGGAAAGCGAACAGGAGTAAAGGGCTTGTTCTTAAACTGGAACTCGAGAAAGCATTTGATAAAGTCGATTGGGACTTCCTAATCGTCATTCTCAAGGCCAAAGTAATG
GACCGTCTTAGCCGTCTTCTTCATCATGGATCCATTGAGAGACATCTATCGGGTTATTCCAAGGATGGTTCTTTCCATATCAACCACCTTCAGTTTGCAGCAGACGATAC
GCTTGTCTTCTCCTCTGCTGAGCCCATACACATCAGAAACTTAGCCACAACTATTAAAATCTTTGAGGAAGCTTCTGGCTTTAATATAAATTTACAACAAATCAGAGATT
TTGGGCATAAACAGTACAAATCTTTGTCTTTCTGGCACACTATTATTGAGAGAGTGGAGAATAAGCTACAGAAATGGGTTACTCTAATCCAAGCTGTACTCTCCAACCTC
CCAACATACTACCTCTCCCTTCTTGAAATTCCAAAGGGAGCTGCCAATTTACTGGAGAGAATTCTTAGAAATTTCCTTTGGGAAGGCCCTAAGTTGGGTGGTAATCTACA
CCTTGTGAACTGGAGAAAAGTCCAGCTCCCTATTGATCAAGTCGGTTTGGTGGTAGATTGGCTAGCTTCTGGAATGACAAATGAGCATCAAACACCTCCTTGGGAGAGGA
CTTCCCCCCAGCTTCACTCGCTCTCTACAAAGAAAGATGCAAAGGTTAGCGGATATGGGATCAATCCACAGCTTCATGGATTTACCATTTCCGTAGACCGCTCAAAGAGG
AGGAGCTAG
Protein sequenceShow/hide protein sequence
MQTNMVLEGDENSGFFHRILATKKRQGTISEILSFQGHSLLQDSEIEAEFLSFYKSLYSWRQDQSLIANEIIDDWKANRSKGLVLKLELEKAFDKVDWDFLIVILKAKVM
DRLSRLLHHGSIERHLSGYSKDGSFHINHLQFAADDTLVFSSAEPIHIRNLATTIKIFEEASGFNINLQQIRDFGHKQYKSLSFWHTIIERVENKLQKWVTLIQAVLSNL
PTYYLSLLEIPKGAANLLERILRNFLWEGPKLGGNLHLVNWRKVQLPIDQVGLVVDWLASGMTNEHQTPPWERTSPQLHSLSTKKDAKVSGYGINPQLHGFTISVDRSKR
RS