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Moc08g33180 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g33180
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr8:24088731..24096314
RNA-Seq ExpressionMoc08g33180
SyntenyMoc08g33180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OWM74668.1 hypothetical protein CDL15_Pgr005248 [Punica granatum]3.9e-0634.29Show/hide
Query:  LALRYLIIKEARILIEKIEPKNASKVHNGSQ-HVVYKAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLT
        L L  L I E   L  K + +   K+H  ++ H+++K E +  +           GRKH  F+ GDWVW  + K+RFS  +K K NP  +        + 
Subjt:  LALRYLIIKEARILIEKIEPKNASKVHNGSQ-HVVYKAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLT

Query:  FDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRMNPIE
         + +K  L GE+     FN +D  PFDVG   DSR NP E
Subjt:  FDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRMNPIE

XP_027071927.1 uncharacterized protein LOC113696743 [Coffea arabica]1.5e-0539.22Show/hide
Query:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN----IHLTFDD--FKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM
        KA+ + EK+  +F      GR+  +FK GDWVW    K+RF + ++ K  P  +    I    DD  ++  L GE+     FN AD  PFDVGD FD R 
Subjt:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN----IHLTFDD--FKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM

Query:  NP
        NP
Subjt:  NP

XP_027097493.1 uncharacterized protein LOC113717045 [Coffea arabica]1.7e-0437.25Show/hide
Query:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWK-----RNPCRNIHLTFDD-FKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM
        KA A+ EK   +FV     GR+  +F+ GDWVW    K+RF + ++ K       P + +    D+ ++  L GE+D    FN AD  PFDV + FD R 
Subjt:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWK-----RNPCRNIHLTFDD-FKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM

Query:  NP
        NP
Subjt:  NP

XP_027109253.1 uncharacterized protein LOC113729126 [Coffea arabica]7.4e-0536.27Show/hide
Query:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLTFDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM
        KA A+ EK+  +F      GR+  +F+ GDWVW    K+RF + +  K  P  +        +  + ++  L GE+     FN AD  PFDVGD FD R 
Subjt:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLTFDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM

Query:  NP
        NP
Subjt:  NP

XP_027155125.1 uncharacterized protein LOC113755285 [Coffea eugenioides]4.8e-0432.71Show/hide
Query:  QHVVYKAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLTFDDFKSALHGEFDEDYIFNAADFRPFDVGDP
        +H+  KA  + E++  +F      GR+  +F+  DWVW    K+RF + ++ K  P  +        +  + ++  L GE+     FN AD  PFDVGD 
Subjt:  QHVVYKAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLTFDDFKSALHGEFDEDYIFNAADFRPFDVGDP

Query:  FDSRMNP
        FD R NP
Subjt:  FDSRMNP

TrEMBL top hitse value%identityAlignment
A0A1U8NJ75 uncharacterized protein LOC1079480952.3e-0429.3Show/hide
Query:  LSCL--WSDSDLKQGTSFLALRYLIIKEARILIEKIEPKNASKVHNGSQHVVYKAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKW
        LSCL  +    L   T+F+  +Y       + +++       K     + +  K   + EKQ  ++V K   GRK  +F+ G+WVW    K+RF   +K 
Subjt:  LSCL--WSDSDLKQGTSFLALRYLIIKEARILIEKIEPKNASKVHNGSQHVVYKAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKW

Query:  KRNPCRN------IHLTFDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRMNPIE
        K  P  +        +  + ++ AL GE++    FN AD  PFD GD  D R N  E
Subjt:  KRNPCRN------IHLTFDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRMNPIE

A0A218WQC2 Reverse transcriptase1.9e-0634.29Show/hide
Query:  LALRYLIIKEARILIEKIEPKNASKVHNGSQ-HVVYKAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLT
        L L  L I E   L  K + +   K+H  ++ H+++K E +  +           GRKH  F+ GDWVW  + K+RFS  +K K NP  +        + 
Subjt:  LALRYLIIKEARILIEKIEPKNASKVHNGSQ-HVVYKAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLT

Query:  FDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRMNPIE
         + +K  L GE+     FN +D  PFDVG   DSR NP E
Subjt:  FDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRMNPIE

A0A6P6T1N2 uncharacterized protein LOC1136967437.3e-0639.22Show/hide
Query:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN----IHLTFDD--FKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM
        KA+ + EK+  +F      GR+  +FK GDWVW    K+RF + ++ K  P  +    I    DD  ++  L GE+     FN AD  PFDVGD FD R 
Subjt:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN----IHLTFDD--FKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM

Query:  NP
        NP
Subjt:  NP

A0A6P6V3R8 uncharacterized protein LOC1137170458.0e-0537.25Show/hide
Query:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWK-----RNPCRNIHLTFDD-FKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM
        KA A+ EK   +FV     GR+  +F+ GDWVW    K+RF + ++ K       P + +    D+ ++  L GE+D    FN AD  PFDV + FD R 
Subjt:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWK-----RNPCRNIHLTFDD-FKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM

Query:  NP
        NP
Subjt:  NP

A0A6P6W1P6 uncharacterized protein LOC1137291263.6e-0536.27Show/hide
Query:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLTFDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM
        KA A+ EK+  +F      GR+  +F+ GDWVW    K+RF + +  K  P  +        +  + ++  L GE+     FN AD  PFDVGD FD R 
Subjt:  KAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKWKRNPCRN------IHLTFDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRM

Query:  NP
        NP
Subjt:  NP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGAGCAGGAAAAATCTTGGAAGCGTAGAATGAAGGAGAAGCCCTCGAGTATATATATATATATACAAAAGGTCGAGATCCTCACCGTACATGTGTCTCTA
TGCGGACGGTTCGGATTACGAGCCAAAACGACGGTTGGTGCTCAAGAGCACCTCGAGAGCCGCGTCCGACGTGAAACTGTGAGGCAGCTATTTAATGCCCCTGTC
AGAGCCCTCGATTGGTCCACCTCACCCATAGTAGCTCGGAGAAGAAGTCAAAAGCGGGTCGCCCCTACCCCCACTAACGTCTCTAAGGTTGTTCAGTGGTGCAAG
ATCATTCAAGTGAGACTTGATCTATCTTGCTTGTGGAGTGATTCGGATCTCAAACAAGGAACAAGTTTTCTTGCCTTGAGATATTTGATCATCAAGGAGGCTAGA
ATACTCATTGAGAAGATTGAACCAAAGAATGCTTCCAAAGTACACAATGGCAGCCAACATGTGGTTTACAAGGCTGAAGCATCTCGTGAGAAGCAAAAATTCAAA
TTTGTTTTTAAATTCATTTATGGCAGGAAGCATACAATGTTCAAATTGGGTGATTGGGTTTGGAGATCCTATTGGAAGGATCGATTTTCTGATGGAAAAAAGTGG
AAGAGGAACCCATGTAGAAATATACATTTGACTTTTGATGATTTTAAGAGTGCTCTACATGGCGAGTTTGATGAAGATTACATATTCAATGCTGCTGATTTCCGT
CCATTTGATGTAGGAGATCCTTTTGATTCGAGGATGAATCCTATTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGAGCAGGAAAAATCTTGGAAGCGTAGAATGAAGGAGAAGCCCTCGAGTATATATATATATATACAAAAGGTCGAGATCCTCACCGTACATGTGTCTCTA
TGCGGACGGTTCGGATTACGAGCCAAAACGACGGTTGGTGCTCAAGAGCACCTCGAGAGCCGCGTCCGACGTGAAACTGTGAGGCAGCTATTTAATGCCCCTGTC
AGAGCCCTCGATTGGTCCACCTCACCCATAGTAGCTCGGAGAAGAAGTCAAAAGCGGGTCGCCCCTACCCCCACTAACGTCTCTAAGGTTGTTCAGTGGTGCAAG
ATCATTCAAGTGAGACTTGATCTATCTTGCTTGTGGAGTGATTCGGATCTCAAACAAGGAACAAGTTTTCTTGCCTTGAGATATTTGATCATCAAGGAGGCTAGA
ATACTCATTGAGAAGATTGAACCAAAGAATGCTTCCAAAGTACACAATGGCAGCCAACATGTGGTTTACAAGGCTGAAGCATCTCGTGAGAAGCAAAAATTCAAA
TTTGTTTTTAAATTCATTTATGGCAGGAAGCATACAATGTTCAAATTGGGTGATTGGGTTTGGAGATCCTATTGGAAGGATCGATTTTCTGATGGAAAAAAGTGG
AAGAGGAACCCATGTAGAAATATACATTTGACTTTTGATGATTTTAAGAGTGCTCTACATGGCGAGTTTGATGAAGATTACATATTCAATGCTGCTGATTTCCGT
CCATTTGATGTAGGAGATCCTTTTGATTCGAGGATGAATCCTATTGAATAA
Protein sequenceShow/hide protein sequence
MREQEKSWKRRMKEKPSSIYIYIQKVEILTVHVSLCGRFGLRAKTTVGAQEHLESRVRRETVRQLFNAPVRALDWSTSPIVARRRSQKRVAPTPTNVSKVVQWCK
IIQVRLDLSCLWSDSDLKQGTSFLALRYLIIKEARILIEKIEPKNASKVHNGSQHVVYKAEASREKQKFKFVFKFIYGRKHTMFKLGDWVWRSYWKDRFSDGKKW
KRNPCRNIHLTFDDFKSALHGEFDEDYIFNAADFRPFDVGDPFDSRMNPIE