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Moc08g33190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g33190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationchr8:24098022..24100502
RNA-Seq ExpressionMoc08g33190
SyntenyMoc08g33190
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.0e-3074Show/hide
Query:  DNTIPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPP---RVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RGYHN
        +  I DAR REALEGT+ER+IR MEALTERIGRLE QNQA  R+PPP   RV+DED+Y+GDGSDHWEDDQ TVLA PR G+ +VG GLDRGRGR RGYHN
Subjt:  DNTIPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPP---RVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RGYHN

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]1.9e-1358.06Show/hide
Query:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDD-QVTVLAAPRRGERNVGRGLD
        M NP++NT I DAR REA + TMERLIRG+E LT+RIGRLE QNQA +RIP P     D Y+GD SDH ED+ QV  L + RR  RN+   +D
Subjt:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDD-QVTVLAAPRRGERNVGRGLD

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]7.7e-1558.1Show/hide
Query:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGR--GRR
        M NP+DNT I DAR REA + TMERLIRG+E LT+RIGRLE QNQA +RIP P     D Y+GD SDH ED+              VG GL RGR  GRR
Subjt:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGR--GRR

Query:  GYHNL
         YHNL
Subjt:  GYHNL

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]7.7e-1558.1Show/hide
Query:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGR--GRR
        M NP+DNT I DAR REA + TMERLIRG+E LT+RIGRLE QNQA +RIP P     D Y+GD SDH ED+              VG GL RGR  GRR
Subjt:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGR--GRR

Query:  GYHNL
         YHNL
Subjt:  GYHNL

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]3.8e-1457.14Show/hide
Query:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGR--GRR
        M NP+DNT I DAR REA + TM+RLIRG+E LT+RIGRLE QNQA +RIP P     D Y+GD SDH ED+              VG GL RGR  GRR
Subjt:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGR--GRR

Query:  GYHNL
         YHNL
Subjt:  GYHNL

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein1.2e-1045.19Show/hide
Query:  DNTIPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIP----PPRVLDEDDY--KGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RG
        +N   + + REA +G + R+I  MEALT+R+ R E +N+A ER+P    PP +++ +D   +GDGSD  +DDQVT+L  PRR    VG G+ R RGR R 
Subjt:  DNTIPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIP----PPRVLDEDDY--KGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RG

Query:  YHNL
        Y N+
Subjt:  YHNL

A0A5A7TYI0 Uncharacterized protein1.9e-0646.91Show/hide
Query:  MEALTERIGRLEAQNQASERIPPPRV------LDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RGYHNL
        MEALT+R+ RLE +N+A ER+PPP         + + Y+GDG D  +DDQVT+L  PRR    VG G+ R RG  + Y N+
Subjt:  MEALTERIGRLEAQNQASERIPPPRV------LDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RGYHNL

A0A5D3CHG3 Retrotrans_gag domain-containing protein2.2e-0748.24Show/hide
Query:  LIRGMEALTERIGRLEAQNQASERIP----PPRVLDEDDY--KGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RGYHNL
        +I  MEALT+R+ R E +N+A ER+P    PP +++ +D   +GDGSD  +DDQVT+L  PRR    VG G+ R RGR R Y N+
Subjt:  LIRGMEALTERIGRLEAQNQASERIP----PPRVLDEDDY--KGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RGYHNL

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241154.9e-3174Show/hide
Query:  DNTIPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPP---RVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RGYHN
        +  I DAR REALEGT+ER+IR MEALTERIGRLE QNQA  R+PPP   RV+DED+Y+GDGSDHWEDDQ TVLA PR G+ +VG GLDRGRGR RGYHN
Subjt:  DNTIPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPP---RVLDEDDYKGDGSDHWEDDQVTVLAAPRRGERNVGRGLDRGRGR-RGYHN

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699489.2e-1458.06Show/hide
Query:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDD-QVTVLAAPRRGERNVGRGLD
        M NP++NT I DAR REA + TMERLIRG+E LT+RIGRLE QNQA +RIP P     D Y+GD SDH ED+ QV  L + RR  RN+   +D
Subjt:  MSNPEDNT-IPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHWEDD-QVTVLAAPRRGERNVGRGLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAATGAGGATGACCAACCAATTCAACATGAGGAAGATCATCCTACGCTCCACGTTGAAGTTTCCAATTGTGAGGTCATTACACAAGTTGTGGAAACCAGGAAAGA
AAGTGTGGAAATCTCTATTGATTCATGTCAATTAGAGTCAAAGAGTAACAAAAGTGAGGAGTATGTGACAAACATGATAGAGGATTGTATGGAGATTGAAGTTGCAAAGA
GTTCGGTTACAAGAGAAGTTAAAATGCTTATTGAAAAGCAAGATCCAAGGGTTGCTTCTCAAATGAGCCAATACCATTCACATGTGAAGATCATTCAAGTGAGACTTGAT
CTATCTTGCTTGTGGAGTGATTCAGATCTCAAACAAGGAACAAGTTTTCTTGCCTTGAGATATTTGATTATCAAGTCTTGCTCATCGGCTTACTTTTCAATATTGGAGTG
TACTTTGCCGAGAGGCATGTCCAATCCTGAAGATAATACCATTCCCGATGCCCGAACGAGAGAGGCACTAGAAGGAACTATGGAACGATTGATTCGTGGCATGGAGGCTT
TGACAGAACGGATAGGAAGGTTGGAGGCTCAAAACCAAGCTTCGGAGAGAATTCCACCACCACGTGTTCTAGATGAGGATGATTATAAAGGTGATGGATCTGATCATTGG
GAGGACGATCAAGTTACAGTCTTGGCGGCTCCAAGACGGGGAGAGAGAAATGTTGGTCGTGGCTTAGATCGAGGGCGAGGCCGAAGAGGCTACCATAATCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAATGAGGATGACCAACCAATTCAACATGAGGAAGATCATCCTACGCTCCACGTTGAAGTTTCCAATTGTGAGGTCATTACACAAGTTGTGGAAACCAGGAAAGA
AAGTGTGGAAATCTCTATTGATTCATGTCAATTAGAGTCAAAGAGTAACAAAAGTGAGGAGTATGTGACAAACATGATAGAGGATTGTATGGAGATTGAAGTTGCAAAGA
GTTCGGTTACAAGAGAAGTTAAAATGCTTATTGAAAAGCAAGATCCAAGGGTTGCTTCTCAAATGAGCCAATACCATTCACATGTGAAGATCATTCAAGTGAGACTTGAT
CTATCTTGCTTGTGGAGTGATTCAGATCTCAAACAAGGAACAAGTTTTCTTGCCTTGAGATATTTGATTATCAAGTCTTGCTCATCGGCTTACTTTTCAATATTGGAGTG
TACTTTGCCGAGAGGCATGTCCAATCCTGAAGATAATACCATTCCCGATGCCCGAACGAGAGAGGCACTAGAAGGAACTATGGAACGATTGATTCGTGGCATGGAGGCTT
TGACAGAACGGATAGGAAGGTTGGAGGCTCAAAACCAAGCTTCGGAGAGAATTCCACCACCACGTGTTCTAGATGAGGATGATTATAAAGGTGATGGATCTGATCATTGG
GAGGACGATCAAGTTACAGTCTTGGCGGCTCCAAGACGGGGAGAGAGAAATGTTGGTCGTGGCTTAGATCGAGGGCGAGGCCGAAGAGGCTACCATAATCTCTAA
Protein sequenceShow/hide protein sequence
MPNEDDQPIQHEEDHPTLHVEVSNCEVITQVVETRKESVEISIDSCQLESKSNKSEEYVTNMIEDCMEIEVAKSSVTREVKMLIEKQDPRVASQMSQYHSHVKIIQVRLD
LSCLWSDSDLKQGTSFLALRYLIIKSCSSAYFSILECTLPRGMSNPEDNTIPDARTREALEGTMERLIRGMEALTERIGRLEAQNQASERIPPPRVLDEDDYKGDGSDHW
EDDQVTVLAAPRRGERNVGRGLDRGRGRRGYHNL