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Moc08g33210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g33210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:24114029..24114561
RNA-Seq ExpressionMoc08g33210
SyntenyMoc08g33210
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8684911.1 Actin-depolymerizing factor 1 [Hibiscus syriacus]1.6e-1235.26Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM
        M D+DW  +D QA+  I+++L   V   +AKE T   L+  L    EKPSA+ K+ L  + FN+ M EG S                         ++A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRK-LGKMS-ASTLRAENRVESVLVAHDKGKSK
         LL+SLPD+     T VS+S G+N LKF DA D  L EE +R+  G+ S +S L  E+R  +     ++G+SK
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRK-LGKMS-ASTLRAENRVESVLVAHDKGKSK

POO03940.1 hypothetical protein TorRG33x02_002440, partial [Trema orientale]2.1e-1234.48Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM
        M D DW+ +D Q +  I+++L   V   VA+  TA E++  L D  EKPSAN K+ L  K F + M EG S                         ++A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQR---KLGKMSASTLRAENRVESVLVAHDKGKSK
         LL SLP + E M+  VSNS+G   L+F+D  D  L EE +R     G  S+S L  ENR  S     ++G+ +
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQR---KLGKMSASTLRAENRVESVLVAHDKGKSK

TKR86343.1 hypothetical protein D5086_0000239010 [Populus alba]2.1e-1235.09Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM
        M  ++W+ +D Q +  I++SL  RV   V KE +  +L++ L    EKPSAN K+ L  K FN+ M E TS                         ++A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLGKMSASTLRAENRVESVLVAHDKGKSK
         LL SLP + E M+T VSNS G + LK+ D  D  L EE +RK    S+S+  A N + +    HD+G S+
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLGKMSASTLRAENRVESVLVAHDKGKSK

TKS02399.1 hypothetical protein D5086_0000163470 [Populus alba]2.1e-1235.09Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM
        M  ++W+ +D Q +  I++SL  RV   V KE +  +L++ L    EKPSAN K+ L  K FN+ M E TS                         ++A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLGKMSASTLRAENRVESVLVAHDKGKSK
         LL SLP + E M+T VSNS G + LK+ D  D  L EE +RK    S+S+  A N + +    HD+G S+
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLGKMSASTLRAENRVESVLVAHDKGKSK

TKS13843.1 hypothetical protein D5086_0000049350 [Populus alba]2.1e-1235.09Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM
        M  ++W+ +D Q +  I++SL  RV   V KE +  +L++ L    EKPSAN K+ L  K FN+ M E TS                         ++A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTS-------------------------MKAM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLGKMSASTLRAENRVESVLVAHDKGKSK
         LL SLP + E M+T VSNS G + LK+ D  D  L EE +RK    S+S+  A N + +    HD+G S+
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLGKMSASTLRAENRVESVLVAHDKGKSK

TrEMBL top hitse value%identityAlignment
A0A803L175 Uncharacterized protein3.2e-1434.08Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM
        M + +WK +D QA+  I+++L   V   +AKETT   L+K L +  EKPSA+ K+ L  + F++ M EG S+                          A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK
         LL+SLPD+     T VS+S G+N LKF D  D  L EE +R+      S+S L  E+R  +++  +++G+S  NY G+
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK

A0A803L9T0 Uncharacterized protein4.2e-1434.08Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM
        M + +WK +D QA+  I+ +L   V   +AKETT   L+K L +  EKPSA+ K+ L  + F++ M EG S+                          A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK
         LL+SLPD+     T VS+S G+N LKF D  D  L EE +R+      S+S L  E+R  +++  +++G+S  NY G+
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK

A0A803LXU7 Uncharacterized protein3.2e-1434.08Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM
        M + +WK +D QA+  I+++L   V   +AKETT   L+K L +  EKPSA+ K+ L  + F++ M EG S+                          A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK
         LL+SLPD+     T VS+S G+N LKF D  D  L EE +R+      S+S L  E+R  +++  +++G+S  NY G+
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK

A0A803M3U1 Uncharacterized protein4.2e-1434.08Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM
        M + +WK +D QA+  I+++L   V   +AKETT   L+K L +  EKPSA+ K+ L  + F++ M EG S+                          A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK
         LL+SLPD+     T VS+S G+N LKF D  D  L EE +R+      S+S L  E+R  +++  +++G+S  NY G+
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK

A0A803MP45 Uncharacterized protein3.2e-1434.08Show/hide
Query:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM
        M + +WK +D QA+  I+++L   V   +AKETT   L+K L +  EKPSA+ K+ L  + F++ M EG S+                          A+
Subjt:  MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMK-------------------------AM

Query:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK
         LL+SLPD+     T VS+S G+N LKF D  D  L EE +R+      S+S L  E+R  +++  +++G+S  NY G+
Subjt:  RLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAALFEETQRKLG--KMSASTLRAENRVESVLVAHDKGKSKINYTGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGACAAGGATTGGAAAGAGATGGATGAGCAGGCTGTTGCAAACATCAAAGTGTCTTTATTGATGAGGGTATGCAGTCTGGTGGCGAAGGAGACAACAGCAAAAGA
ACTGTTGAAGACCTTGCAAGACAGGAATGAGAAACCTTCTGCCAATACAAAAATAATTCTATGGACGAAGTATTTCAATATTCACATGAAGGAGGGAACCTCGATGAAGG
CTATGAGGCTATTGACATCTTTGCCTGACAATTTGGAGACGATGAAGACGGTAGTGTCGAATTCATTAGGGGACAATAGTCTAAAATTTTCAGATGCTTGTGATGCTGCG
TTATTTGAGGAAACCCAAAGAAAATTGGGAAAAATGTCTGCATCTACTTTAAGGGCAGAAAACAGGGTTGAATCAGTTTTGGTAGCTCACGACAAGGGAAAGTCCAAGAT
AAATTACACGGGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCGACAAGGATTGGAAAGAGATGGATGAGCAGGCTGTTGCAAACATCAAAGTGTCTTTATTGATGAGGGTATGCAGTCTGGTGGCGAAGGAGACAACAGCAAAAGA
ACTGTTGAAGACCTTGCAAGACAGGAATGAGAAACCTTCTGCCAATACAAAAATAATTCTATGGACGAAGTATTTCAATATTCACATGAAGGAGGGAACCTCGATGAAGG
CTATGAGGCTATTGACATCTTTGCCTGACAATTTGGAGACGATGAAGACGGTAGTGTCGAATTCATTAGGGGACAATAGTCTAAAATTTTCAGATGCTTGTGATGCTGCG
TTATTTGAGGAAACCCAAAGAAAATTGGGAAAAATGTCTGCATCTACTTTAAGGGCAGAAAACAGGGTTGAATCAGTTTTGGTAGCTCACGACAAGGGAAAGTCCAAGAT
AAATTACACGGGGAAGTAG
Protein sequenceShow/hide protein sequence
MTDKDWKEMDEQAVANIKVSLLMRVCSLVAKETTAKELLKTLQDRNEKPSANTKIILWTKYFNIHMKEGTSMKAMRLLTSLPDNLETMKTVVSNSLGDNSLKFSDACDAA
LFEETQRKLGKMSASTLRAENRVESVLVAHDKGKSKINYTGK