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Moc08g33320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g33320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationchr8:24202327..24208834
RNA-Seq ExpressionMoc08g33320
SyntenyMoc08g33320
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1
IPR011333 - SKP1/BTB/POZ domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599102.1 Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2484.72Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATE KA TEE+KVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELE+N +++
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

XP_004144232.1 protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus]7.4e-2687.5Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATELKA +EE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN +++
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

XP_022153100.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Momordica charantia]1.3e-2794.44Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENN +++
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

XP_022999790.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima]5.6e-2687.5Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATE+KA TEE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELE+NV+++
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

XP_023546762.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo]3.7e-2586.11Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATELKA TEE+KVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELE+N +++
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

TrEMBL top hitse value%identityAlignment
A0A0A0KIG9 Uncharacterized protein3.6e-2687.5Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATELKA +EE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN +++
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

A0A1S3CMK4 protein DSS1 HOMOLOG ON CHROMOSOME V-like3.6e-2687.5Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATELKA +EE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELENN +++
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

A0A6J1DJN7 protein DSS1 HOMOLOG ON CHROMOSOME V-like6.5e-2894.44Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENN +++
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

A0A6J1KGK6 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like2.7e-2687.5Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATE+KA TEE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELE+NV+++
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

A0A6J1KMT1 protein DSS1 HOMOLOG ON CHROMOSOME V-like8.8e-2586.11Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MATE KA TEE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+QL+RELE+N + +
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

SwissProt top hitse value%identityAlignment
P60896 26S proteasome complex subunit SEM11.1e-0550.85Show/hide
Query:  EEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENN
        + + + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QLR ELE +
Subjt:  EEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENN

P60897 26S proteasome complex subunit SEM11.1e-0550.85Show/hide
Query:  EEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENN
        + + + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QLR ELE +
Subjt:  EEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENN

Q3ZBR6 26S proteasome complex subunit SEM11.1e-0550.85Show/hide
Query:  EEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENN
        + + + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QLR ELE +
Subjt:  EEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENN

Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V1.5e-1873.53Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELEN
        MA E KA  E +KVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS QL++ELEN
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELEN

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)1.8e-1971.62Show/hide
Query:  MATELKAVTEE-MKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MA E KA T E +K+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELEN   ++
Subjt:  MATELKAVTEE-MKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)1.3e-2071.62Show/hide
Query:  MATELKAVTEE-MKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MA E KA T E +K+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELEN   ++
Subjt:  MATELKAVTEE-MKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

AT1G64750.2 deletion of SUV3 suppressor 1(I)1.3e-2071.62Show/hide
Query:  MATELKAVTEE-MKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE
        MA E KA T E +K+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELEN   ++
Subjt:  MATELKAVTEE-MKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEE

AT1G64750.3 deletion of SUV3 suppressor 1(I)1.4e-1446.09Show/hide
Query:  MATELKAVTEE-MKVDLFEDDDEFEEFEINE-----------------------------------------EW-EVKEGKEITQQWEDDWDDDDVNDDF
        MA E KA T E +K+DLFEDDDEFEEFEINE                                         +W E +E KE++QQWEDDWDDDDVNDDF
Subjt:  MATELKAVTEE-MKVDLFEDDDEFEEFEINE-----------------------------------------EW-EVKEGKEITQQWEDDWDDDDVNDDF

Query:  SVQLRRELENNVQEE
        S QLR+ELEN   ++
Subjt:  SVQLRRELENNVQEE

AT4G30940.1 BTB/POZ domain with WD40/YVTN repeat-like protein3.3e-0856.41Show/hide
Query:  GEHFVDRDPACFGVLLNLVRTGELFVPPTIPDTVLFREA
        G+ F+DR+P CF VLL+L+RTG+L +PP IP+ +L +EA
Subjt:  GEHFVDRDPACFGVLLNLVRTGELFVPPTIPDTVLFREA

AT5G45010.1 DSS1 homolog on chromosome V1.1e-1973.53Show/hide
Query:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELEN
        MA E KA  E +KVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS QL++ELEN
Subjt:  MATELKAVTEEMKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGAACTGAAAGCAGTTACTGAGGAGATGAAGGTTGACCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGAAGG
TAAAGAAATTACACAGCAGTGGGAAGATGACTGGGATGACGACGATGTCAACGACGACTTCTCGGTGCAGCTTAGGAGAGAATTGGAGAACAACGTGCAGGAGGAATTTG
GAGAACATTTTGTGGACAGAGACCCCGCTTGTTTCGGTGTTCTTCTTAATCTTGTTCGAACCGGAGAGCTTTTCGTTCCTCCAACGATTCCCGACACCGTTCTCTTCCGA
GAAGCTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTGAACTGAAAGCAGTTACTGAGGAGATGAAGGTTGACCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGAAGG
TAAAGAAATTACACAGCAGTGGGAAGATGACTGGGATGACGACGATGTCAACGACGACTTCTCGGTGCAGCTTAGGAGAGAATTGGAGAACAACGTGCAGGAGGAATTTG
GAGAACATTTTGTGGACAGAGACCCCGCTTGTTTCGGTGTTCTTCTTAATCTTGTTCGAACCGGAGAGCTTTTCGTTCCTCCAACGATTCCCGACACCGTTCTCTTCCGA
GAAGCTCATTAA
Protein sequenceShow/hide protein sequence
MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQLRRELENNVQEEFGEHFVDRDPACFGVLLNLVRTGELFVPPTIPDTVLFR
EAH