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Moc08g34360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g34360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:25121560..25124885
RNA-Seq ExpressionMoc08g34360
SyntenyMoc08g34360
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]9.7e-2191.8Show/hide
Query:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR
        +RSVPVEILDN +ISEPDLMEIGAPESSWMDPIADFIRGNSPQD KERRKLARRAARFV R
Subjt:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR

XP_022142324.1 uncharacterized protein LOC111012466 [Momordica charantia]1.8e-1986.89Show/hide
Query:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR
        +RSVP+EILDN +ISEPDLMEIGAPESSWMDPIADFIRGNSPQD  E RKLARRAARFV R
Subjt:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR

XP_022143486.1 uncharacterized protein LOC111013362 [Momordica charantia]9.7e-2191.8Show/hide
Query:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR
        +RSVPVEILDN +ISEPDLMEIGAPESSWMDPIADFIRGNSPQD KERRKLARRAARFV R
Subjt:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]5.3e-2764.04Show/hide
Query:  ERRKLARRAARFVGRMARHYNARVRPRAFQVGHLVLRRVQTHLGALDPTWEGPFEVKGIIRPGTYVLADLQGDILAHPWNAEHLKRYYP
        +R     R      RMARHYN R++PR+FQVGHLV  ++Q+H+G LDP+WE  FEVKGI+RPGTY+LADL+  +LAHPWNAEHLKRYYP
Subjt:  ERRKLARRAARFVGRMARHYNARVRPRAFQVGHLVLRRVQTHLGALDPTWEGPFEVKGIIRPGTYVLADLQGDILAHPWNAEHLKRYYP

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]3.4e-0534.78Show/hide
Query:  MAWARSEENRPLRGSVMPPRSKAHWSAPSKLSPVGMGRLSLRPTCRGRS----LP------------HPLRSSSLFLCLVLR------SRSVPVEILDNL
        M WA       ++           W   S+ SP  + R S  P+ RGRS    LP            H   S S  L  +        +R V +EILDN 
Subjt:  MAWARSEENRPLRGSVMPPRSKAHWSAPSKLSPVGMGRLSLRPTCRGRS----LP------------HPLRSSSLFLCLVLR------SRSVPVEILDNL

Query:  TISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRK
        +I EPD+ME+  P  SWMDPI +FI+G   Q SKE  K
Subjt:  TISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRK

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]3.3e-2163.29Show/hide
Query:  ERRKLAR-RAARFVGRMARHYNARVRPRAFQVGHLVLRRVQTHLGALDPTWEGPFEVKGIIRPGTYVLADLQGDILAHP
        E+R+ A+ R A +  +MARHYN+RVR R+FQ+G+LVLR+VQ H+  L+P+WEGPFEVKGI+RPGTY+LADL+G +L+HP
Subjt:  ERRKLAR-RAARFVGRMARHYNARVRPRAFQVGHLVLRRVQTHLGALDPTWEGPFEVKGIIRPGTYVLADLQGDILAHP

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H4.7e-2191.8Show/hide
Query:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR
        +RSVPVEILDN +ISEPDLMEIGAPESSWMDPIADFIRGNSPQD KERRKLARRAARFV R
Subjt:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR

A0A6J1CL97 uncharacterized protein LOC1110124668.9e-2086.89Show/hide
Query:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR
        +RSVP+EILDN +ISEPDLMEIGAPESSWMDPIADFIRGNSPQD  E RKLARRAARFV R
Subjt:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR

A0A6J1CQD7 Ribonuclease H4.7e-2191.8Show/hide
Query:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR
        +RSVPVEILDN +ISEPDLMEIGAPESSWMDPIADFIRGNSPQD KERRKLARRAARFV R
Subjt:  SRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRKLARRAARFVGR

A0A6J1DXL9 uncharacterized protein LOC1110254482.6e-2764.04Show/hide
Query:  ERRKLARRAARFVGRMARHYNARVRPRAFQVGHLVLRRVQTHLGALDPTWEGPFEVKGIIRPGTYVLADLQGDILAHPWNAEHLKRYYP
        +R     R      RMARHYN R++PR+FQVGHLV  ++Q+H+G LDP+WE  FEVKGI+RPGTY+LADL+  +LAHPWNAEHLKRYYP
Subjt:  ERRKLARRAARFVGRMARHYNARVRPRAFQVGHLVLRRVQTHLGALDPTWEGPFEVKGIIRPGTYVLADLQGDILAHPWNAEHLKRYYP

A0A6J1DXL9 uncharacterized protein LOC1110254481.6e-0534.78Show/hide
Query:  MAWARSEENRPLRGSVMPPRSKAHWSAPSKLSPVGMGRLSLRPTCRGRS----LP------------HPLRSSSLFLCLVLR------SRSVPVEILDNL
        M WA       ++           W   S+ SP  + R S  P+ RGRS    LP            H   S S  L  +        +R V +EILDN 
Subjt:  MAWARSEENRPLRGSVMPPRSKAHWSAPSKLSPVGMGRLSLRPTCRGRS----LP------------HPLRSSSLFLCLVLR------SRSVPVEILDNL

Query:  TISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRK
        +I EPD+ME+  P  SWMDPI +FI+G   Q SKE  K
Subjt:  TISEPDLMEIGAPESSWMDPIADFIRGNSPQDSKERRK

A0A6J1DXL9 uncharacterized protein LOC1110254481.6e-2163.29Show/hide
Query:  ERRKLAR-RAARFVGRMARHYNARVRPRAFQVGHLVLRRVQTHLGALDPTWEGPFEVKGIIRPGTYVLADLQGDILAHP
        E+R+ A+ R A +  +MARHYN+RVR R+FQ+G+LVLR+VQ H+  L+P+WEGPFEVKGI+RPGTY+LADL+G +L+HP
Subjt:  ERRKLAR-RAARFVGRMARHYNARVRPRAFQVGHLVLRRVQTHLGALDPTWEGPFEVKGIIRPGTYVLADLQGDILAHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGGGCACGGTCCGAGGAGAACAGACCGCTTCGAGGGAGTGTTATGCCTCCGCGCTCAAAGGCTCATTGGTCTGCGCCCTCGAAACTCTCGCCGGTAGGG
ATGGGACGCTTGAGTTTGAGGCCGACCTGCCGAGGAAGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTGCTTAGTCCTGAGAAGCAGGTCGGTC
CCCGTCGAGATCTTAGATAATCTCACGATCTCAGAGCCAGATCTGATGGAGATTGGCGCTCCAGAATCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGC
AACTCACCACAAGACTCCAAGGAGCGCAGAAAGTTGGCAAGGCGAGCAGCTCGGTTCGTGGGCAGAATGGCCAGACATTACAATGCCCGCGTTCGACCTCGGGCC
TTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACACATCTGGGTGCCCTTGATCCGACCTGGGAGGGCCCGTTTGAGGTCAAGGGCATAATCCGACCTGGG
ACGTACGTATTGGCCGATCTGCAAGGAGACATCCTCGCGCACCCGTGGAATGCGGAGCACCTGAAACGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTGGGCACGGTCCGAGGAGAACAGACCGCTTCGAGGGAGTGTTATGCCTCCGCGCTCAAAGGCTCATTGGTCTGCGCCCTCGAAACTCTCGCCGGTAGGG
ATGGGACGCTTGAGTTTGAGGCCGACCTGCCGAGGAAGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTGCTTAGTCCTGAGAAGCAGGTCGGTC
CCCGTCGAGATCTTAGATAATCTCACGATCTCAGAGCCAGATCTGATGGAGATTGGCGCTCCAGAATCCTCATGGATGGACCCGATTGCGGACTTCATTAGGGGC
AACTCACCACAAGACTCCAAGGAGCGCAGAAAGTTGGCAAGGCGAGCAGCTCGGTTCGTGGGCAGAATGGCCAGACATTACAATGCCCGCGTTCGACCTCGGGCC
TTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACACATCTGGGTGCCCTTGATCCGACCTGGGAGGGCCCGTTTGAGGTCAAGGGCATAATCCGACCTGGG
ACGTACGTATTGGCCGATCTGCAAGGAGACATCCTCGCGCACCCGTGGAATGCGGAGCACCTGAAACGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MAWARSEENRPLRGSVMPPRSKAHWSAPSKLSPVGMGRLSLRPTCRGRSLPHPLRSSSLFLCLVLRSRSVPVEILDNLTISEPDLMEIGAPESSWMDPIADFIRG
NSPQDSKERRKLARRAARFVGRMARHYNARVRPRAFQVGHLVLRRVQTHLGALDPTWEGPFEVKGIIRPGTYVLADLQGDILAHPWNAEHLKRYYP