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Moc08g34440 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g34440
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibosomal protein S12
Genome locationchr8:25175910..25176435
RNA-Seq ExpressionMoc08g34440
SyntenyMoc08g34440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER39086.1 ribosomal protein S12 [Striga asiatica]1.2e-1665.33Show/hide
Query:  CGAMALKKQQRDLKKFMIRDAKAREEACLKCTWMPSRAECAFIDVVDWRQPYIEYLTKGTLPDDRYETNKLKKIA
        CG   +    R L  F  R    REEACLKCT+      CAFIDVVDWRQPYIEYLTKGTLPDDRYE NKLKK+A
Subjt:  CGAMALKKQQRDLKKFMIRDAKAREEACLKCTWMPSRAECAFIDVVDWRQPYIEYLTKGTLPDDRYETNKLKKIA

KAF7141076.1 hypothetical protein RHSIM_Rhsim06G0084200 [Rhododendron simsii]1.1e-0651.67Show/hide
Query:  MIRDAKAREEACLKCTWMPSRAECAFIDVV-DWRQPYIEYLTKGTLPDDRYETNKLKKIA
        M  DA A +  C KC  +PS+ EC FI+V  DWR+PYI++LT+GTLP DR +    KK A
Subjt:  MIRDAKAREEACLKCTWMPSRAECAFIDVV-DWRQPYIEYLTKGTLPDDRYETNKLKKIA

KAG5543934.1 hypothetical protein RHGRI_016627 [Rhododendron griersonianum]2.4e-0651.67Show/hide
Query:  MIRDAKAREEACLKCTWMPSRAECAFIDVV-DWRQPYIEYLTKGTLPDDRYETNKLKKIA
        M  DA   +  C KC  +PS+AEC FI V  DWR+PYI++LT GTLP DR +   +KK A
Subjt:  MIRDAKAREEACLKCTWMPSRAECAFIDVV-DWRQPYIEYLTKGTLPDDRYETNKLKKIA

KAG5552838.1 hypothetical protein RHGRI_010819 [Rhododendron griersonianum]8.3e-0751.72Show/hide
Query:  MIRDAKAREEACLKCTWMPSRAECAFIDVV-DWRQPYIEYLTKGTLPDDRYETNKLKK
        M+ DA   +  C KC  +PS+AEC FI V  DWR+PYI++LT GTLP DR +   +KK
Subjt:  MIRDAKAREEACLKCTWMPSRAECAFIDVV-DWRQPYIEYLTKGTLPDDRYETNKLKK

KJB09732.1 hypothetical protein B456_001G160800 [Gossypium raimondii]9.1e-1490.48Show/hide
Query:  MIRDAKAREEACLKCTWMPSRAECAFIDVVDWRQPYIEYLTK
        M RDAKAREEACLKCTWMP RAECAFI+VVDWRQPYIEYLT+
Subjt:  MIRDAKAREEACLKCTWMPSRAECAFIDVVDWRQPYIEYLTK

TrEMBL top hitse value%identityAlignment
A0A0D2LZA6 Uncharacterized protein4.4e-1490.48Show/hide
Query:  MIRDAKAREEACLKCTWMPSRAECAFIDVVDWRQPYIEYLTK
        M RDAKAREEACLKCTWMP RAECAFI+VVDWRQPYIEYLT+
Subjt:  MIRDAKAREEACLKCTWMPSRAECAFIDVVDWRQPYIEYLTK

A0A5A7Q2J0 Ribosomal protein S125.6e-1765.33Show/hide
Query:  CGAMALKKQQRDLKKFMIRDAKAREEACLKCTWMPSRAECAFIDVVDWRQPYIEYLTKGTLPDDRYETNKLKKIA
        CG   +    R L  F  R    REEACLKCT+      CAFIDVVDWRQPYIEYLTKGTLPDDRYE NKLKK+A
Subjt:  CGAMALKKQQRDLKKFMIRDAKAREEACLKCTWMPSRAECAFIDVVDWRQPYIEYLTKGTLPDDRYETNKLKKIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATGTGGCGCCATGGCGTTGAAGAAGCAGCAAAGAGACTTGAAGAAGTTCATGATAAGGGATGCAAAAGCTCGAGAAGAGGCTTGTCTAAAATGCACATGGATGCC
CTCTCGAGCAGAATGTGCATTTATCGATGTAGTGGATTGGAGACAGCCATATATCGAGTATCTGACAAAAGGAACCTTACCGGATGATAGATACGAAACGAATAAGCTAA
AGAAGATAGCCAACCTAAAGGTGATGAAGCGATGTAGATCATGCACCAATCACATGCTGGCATCTTGGCGAGCACCAAGGAGGGCGAAAGCTGTTACAGTATTTGCTGCA
ATCAGAAAAAAAAGGGAAATCCCGGAGGGCGCCACATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATGTGGCGCCATGGCGTTGAAGAAGCAGCAAAGAGACTTGAAGAAGTTCATGATAAGGGATGCAAAAGCTCGAGAAGAGGCTTGTCTAAAATGCACATGGATGCC
CTCTCGAGCAGAATGTGCATTTATCGATGTAGTGGATTGGAGACAGCCATATATCGAGTATCTGACAAAAGGAACCTTACCGGATGATAGATACGAAACGAATAAGCTAA
AGAAGATAGCCAACCTAAAGGTGATGAAGCGATGTAGATCATGCACCAATCACATGCTGGCATCTTGGCGAGCACCAAGGAGGGCGAAAGCTGTTACAGTATTTGCTGCA
ATCAGAAAAAAAAGGGAAATCCCGGAGGGCGCCACATAA
Protein sequenceShow/hide protein sequence
MPCGAMALKKQQRDLKKFMIRDAKAREEACLKCTWMPSRAECAFIDVVDWRQPYIEYLTKGTLPDDRYETNKLKKIANLKVMKRCRSCTNHMLASWRAPRRAKAVTVFAA
IRKKREIPEGAT