; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g34760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g34760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr8:25401368..25402407
RNA-Seq ExpressionMoc08g34760
SyntenyMoc08g34760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]5.2e-10079.38Show/hide
Query:  MRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEGGEDEE-------------------------------NSNQQAESSYNP
        MRTQM TME+MY+EMVQAAGA SRSENRVAR+DM EQ+GHHLGPV++ HPEGGEDEE                               NSNQQAESSYNP
Subjt:  MRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEGGEDEE-------------------------------NSNQQAESSYNP

Query:  ITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQ
        ITPEGVITRE+FDQLKSKFDAQVEALKAKCEKKES FDD DLGESPFTSDIL+A IP KFKTPT+KPYDGSKDPKDYVEVFEGLMDFQAATDAIKCR FQ
Subjt:  ITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQ

Query:  IALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL
        IALTGSARL YRRLPAR ISTYSQLRKEFI QFSSRHYDRKTATHL TIRQKEGETL
Subjt:  IALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]1.4e-8164.26Show/hide
Query:  MVQPANSTNTADRRALAANDGHQKEVGAEVVEGQIHKGHASPRPFCHWHIQSHPRPIAAEKEMEAMRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMR
        MVQPANSTNTADRRALAAN GHQ+EVGAEVVEGQ H+      P C                                         +R    V      
Subjt:  MVQPANSTNTADRRALAANDGHQKEVGAEVVEGQIHKGHASPRPFCHWHIQSHPRPIAAEKEMEAMRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMR

Query:  EQKGHHLGPVEEEHPEGGEDEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIK
                 +   HP+          +AESSYNPITP GVITRE+FDQLKSKFDAQVEALKA+CEKKES FDD DLGE  F+SDIL+A IPPKFKTPT+K
Subjt:  EQKGHHLGPVEEEHPEGGEDEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIK

Query:  PYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL
        PYDGSKDPKDYVEVFE LMDFQAATDAIKC AFQIALTGSARL YRRLPARLISTYSQLRKEFI+QFSSRHYDRKT THLATIRQKEGETL
Subjt:  PYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]8.4e-7475.61Show/hide
Query:  GSRSENRVARDDMREQKGHHLGPVEEEHPEGGEDEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDIL
        G   E    R D+RE           +         NSNQQAESSYNPITP+ VITRE+FDQLKSKFDAQVEALKA CEKKES FDD DLGE PFT DIL
Subjt:  GSRSENRVARDDMREQKGHHLGPVEEEHPEGGEDEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDIL

Query:  KAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQK
        +API PKFKTPT+KPYDGSK+PKDYV+VFEGLM+FQAATDAIKCRAFQIA TGSARL YRRLPAR ISTYSQLRKEFI+QFSSR+YDRKTATHLATIRQK
Subjt:  KAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQK

Query:  EGETL
        +GETL
Subjt:  EGETL

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]5.8e-9176.31Show/hide
Query:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEG---------------GED-----EENSNQQAESSYNPITPEGVIT
        MEAMRTQMRTMEEMYN+MVQ AGA SRS ++V  +D+ EQ   H  PV+EEH  G               GE       +NSNQQAESSYNPI PEGVIT
Subjt:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEG---------------GED-----EENSNQQAESSYNPITPEGVIT

Query:  REKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSAR
        RE+F+QLKSKFDAQVEALK +CEKKES FDD DLGESPFTSDIL+A IPPKFKTPT+K YDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSAR
Subjt:  REKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSAR

Query:  LCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL
        L YRRLPAR ISTYSQLRKEFI+QF SRHYDRKT THLATIRQKEG+TL
Subjt:  LCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]1.5e-10267.38Show/hide
Query:  MVQPANSTNTADRRALAANDGHQKEVGAEVVEGQIHKGHASPRPFCHWH-------IQSHPRPI---------------------------AAEKEMEAM
        MVQP +STNT DRRAL ANDGHQ+EVGAEVVEGQIH+G     PFC            +HP+P                            A +KEMEAM
Subjt:  MVQPANSTNTADRRALAANDGHQKEVGAEVVEGQIHKGHASPRPFCHWH-------IQSHPRPI---------------------------AAEKEMEAM

Query:  RTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEGGE---DEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAK
        RTQM TMEEMYNEMVQA GAGSRSE+R ARD+  + + H          +G       +NSNQQAESSYNP+ PEGVITRE+FDQLKSKFDAQVE LKA+
Subjt:  RTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEGGE---DEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAK

Query:  CEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEF
        CE K S FDD DLGESPFTSDIL+A IP KFKTPT+KPYDGSKDPKDYVEVFEGLM FQAATDAIK RAFQIALT SARL YRRLPAR ISTYSQLRKEF
Subjt:  CEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEF

Query:  ITQFSSRHYDRKTATHLATIRQKEGETL
         +QFSSRHY+RKTATHLATIRQKE ETL
Subjt:  ITQFSSRHYDRKTATHLATIRQKEGETL

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196342.5e-10079.38Show/hide
Query:  MRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEGGEDEE-------------------------------NSNQQAESSYNP
        MRTQM TME+MY+EMVQAAGA SRSENRVAR+DM EQ+GHHLGPV++ HPEGGEDEE                               NSNQQAESSYNP
Subjt:  MRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEGGEDEE-------------------------------NSNQQAESSYNP

Query:  ITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQ
        ITPEGVITRE+FDQLKSKFDAQVEALKAKCEKKES FDD DLGESPFTSDIL+A IP KFKTPT+KPYDGSKDPKDYVEVFEGLMDFQAATDAIKCR FQ
Subjt:  ITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQ

Query:  IALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL
        IALTGSARL YRRLPAR ISTYSQLRKEFI QFSSRHYDRKTATHL TIRQKEGETL
Subjt:  IALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL

A0A6J1DHB3 uncharacterized protein LOC1110204796.9e-8264.26Show/hide
Query:  MVQPANSTNTADRRALAANDGHQKEVGAEVVEGQIHKGHASPRPFCHWHIQSHPRPIAAEKEMEAMRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMR
        MVQPANSTNTADRRALAAN GHQ+EVGAEVVEGQ H+      P C                                         +R    V      
Subjt:  MVQPANSTNTADRRALAANDGHQKEVGAEVVEGQIHKGHASPRPFCHWHIQSHPRPIAAEKEMEAMRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMR

Query:  EQKGHHLGPVEEEHPEGGEDEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIK
                 +   HP+          +AESSYNPITP GVITRE+FDQLKSKFDAQVEALKA+CEKKES FDD DLGE  F+SDIL+A IPPKFKTPT+K
Subjt:  EQKGHHLGPVEEEHPEGGEDEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIK

Query:  PYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL
        PYDGSKDPKDYVEVFE LMDFQAATDAIKC AFQIALTGSARL YRRLPARLISTYSQLRKEFI+QFSSRHYDRKT THLATIRQKEGETL
Subjt:  PYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL

A0A6J1DM55 uncharacterized protein LOC1110222674.1e-7475.61Show/hide
Query:  GSRSENRVARDDMREQKGHHLGPVEEEHPEGGEDEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDIL
        G   E    R D+RE           +         NSNQQAESSYNPITP+ VITRE+FDQLKSKFDAQVEALKA CEKKES FDD DLGE PFT DIL
Subjt:  GSRSENRVARDDMREQKGHHLGPVEEEHPEGGEDEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDIL

Query:  KAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQK
        +API PKFKTPT+KPYDGSK+PKDYV+VFEGLM+FQAATDAIKCRAFQIA TGSARL YRRLPAR ISTYSQLRKEFI+QFSSR+YDRKTATHLATIRQK
Subjt:  KAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQK

Query:  EGETL
        +GETL
Subjt:  EGETL

A0A6J1DPN4 uncharacterized protein LOC1110230602.8e-9176.31Show/hide
Query:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEG---------------GED-----EENSNQQAESSYNPITPEGVIT
        MEAMRTQMRTMEEMYN+MVQ AGA SRS ++V  +D+ EQ   H  PV+EEH  G               GE       +NSNQQAESSYNPI PEGVIT
Subjt:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEG---------------GED-----EENSNQQAESSYNPITPEGVIT

Query:  REKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSAR
        RE+F+QLKSKFDAQVEALK +CEKKES FDD DLGESPFTSDIL+A IPPKFKTPT+K YDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSAR
Subjt:  REKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSAR

Query:  LCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL
        L YRRLPAR ISTYSQLRKEFI+QF SRHYDRKT THLATIRQKEG+TL
Subjt:  LCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL

A0A6J1DZJ1 uncharacterized protein LOC1110257387.1e-10367.38Show/hide
Query:  MVQPANSTNTADRRALAANDGHQKEVGAEVVEGQIHKGHASPRPFCHWH-------IQSHPRPI---------------------------AAEKEMEAM
        MVQP +STNT DRRAL ANDGHQ+EVGAEVVEGQIH+G     PFC            +HP+P                            A +KEMEAM
Subjt:  MVQPANSTNTADRRALAANDGHQKEVGAEVVEGQIHKGHASPRPFCHWH-------IQSHPRPI---------------------------AAEKEMEAM

Query:  RTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEGGE---DEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAK
        RTQM TMEEMYNEMVQA GAGSRSE+R ARD+  + + H          +G       +NSNQQAESSYNP+ PEGVITRE+FDQLKSKFDAQVE LKA+
Subjt:  RTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPVEEEHPEGGE---DEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAK

Query:  CEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEF
        CE K S FDD DLGESPFTSDIL+A IP KFKTPT+KPYDGSKDPKDYVEVFEGLM FQAATDAIK RAFQIALT SARL YRRLPAR ISTYSQLRKEF
Subjt:  CEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEF

Query:  ITQFSSRHYDRKTATHLATIRQKEGETL
         +QFSSRHY+RKTATHLATIRQKE ETL
Subjt:  ITQFSSRHYDRKTATHLATIRQKEGETL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCCAGCAAATTCAACTAACACGGCCGACCGAAGAGCTCTAGCGGCTAATGATGGCCACCAGAAGGAGGTCGGGGCAGAGGTGGTAGAGGGGCAGATTCATAA
AGGCCACGCATCACCACGCCCGTTCTGCCACTGGCACATCCAAAGCCATCCAAGGCCAATCGCGGCCGAGAAAGAAATGGAGGCAATGCGCACTCAGATGCGCACCATGG
AAGAGATGTACAACGAGATGGTGCAAGCTGCGGGCGCTGGGTCTCGGTCTGAAAATCGGGTGGCACGCGATGACATGCGTGAGCAAAAGGGTCATCACCTCGGTCCAGTC
GAGGAAGAGCACCCTGAAGGAGGTGAGGACGAAGAGAACTCCAACCAGCAGGCAGAATCCTCCTACAATCCAATAACTCCCGAGGGGGTGATCACAAGGGAGAAGTTCGA
CCAGCTAAAGAGCAAGTTTGATGCTCAGGTTGAGGCCTTGAAGGCTAAGTGCGAGAAAAAAGAAAGTCCGTTTGATGATGACGACCTGGGAGAATCGCCATTTACCTCGG
ACATCCTAAAGGCTCCGATCCCTCCAAAATTCAAGACTCCCACCATAAAGCCTTATGACGGGTCTAAGGACCCAAAAGACTATGTTGAGGTCTTCGAGGGCCTCATGGAC
TTTCAAGCGGCAACAGACGCAATCAAGTGCCGCGCCTTCCAGATCGCACTTACCGGCAGCGCGCGCCTGTGTTACCGAAGATTGCCGGCCAGGTTGATCTCGACCTACTC
CCAGCTGAGGAAAGAGTTCATCACTCAATTCTCTTCTCGGCACTATGATAGAAAGACAGCAACTCACCTCGCCACCATCAGACAGAAGGAAGGTGAGACGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGCCAGCAAATTCAACTAACACGGCCGACCGAAGAGCTCTAGCGGCTAATGATGGCCACCAGAAGGAGGTCGGGGCAGAGGTGGTAGAGGGGCAGATTCATAA
AGGCCACGCATCACCACGCCCGTTCTGCCACTGGCACATCCAAAGCCATCCAAGGCCAATCGCGGCCGAGAAAGAAATGGAGGCAATGCGCACTCAGATGCGCACCATGG
AAGAGATGTACAACGAGATGGTGCAAGCTGCGGGCGCTGGGTCTCGGTCTGAAAATCGGGTGGCACGCGATGACATGCGTGAGCAAAAGGGTCATCACCTCGGTCCAGTC
GAGGAAGAGCACCCTGAAGGAGGTGAGGACGAAGAGAACTCCAACCAGCAGGCAGAATCCTCCTACAATCCAATAACTCCCGAGGGGGTGATCACAAGGGAGAAGTTCGA
CCAGCTAAAGAGCAAGTTTGATGCTCAGGTTGAGGCCTTGAAGGCTAAGTGCGAGAAAAAAGAAAGTCCGTTTGATGATGACGACCTGGGAGAATCGCCATTTACCTCGG
ACATCCTAAAGGCTCCGATCCCTCCAAAATTCAAGACTCCCACCATAAAGCCTTATGACGGGTCTAAGGACCCAAAAGACTATGTTGAGGTCTTCGAGGGCCTCATGGAC
TTTCAAGCGGCAACAGACGCAATCAAGTGCCGCGCCTTCCAGATCGCACTTACCGGCAGCGCGCGCCTGTGTTACCGAAGATTGCCGGCCAGGTTGATCTCGACCTACTC
CCAGCTGAGGAAAGAGTTCATCACTCAATTCTCTTCTCGGCACTATGATAGAAAGACAGCAACTCACCTCGCCACCATCAGACAGAAGGAAGGTGAGACGCTGTGA
Protein sequenceShow/hide protein sequence
MVQPANSTNTADRRALAANDGHQKEVGAEVVEGQIHKGHASPRPFCHWHIQSHPRPIAAEKEMEAMRTQMRTMEEMYNEMVQAAGAGSRSENRVARDDMREQKGHHLGPV
EEEHPEGGEDEENSNQQAESSYNPITPEGVITREKFDQLKSKFDAQVEALKAKCEKKESPFDDDDLGESPFTSDILKAPIPPKFKTPTIKPYDGSKDPKDYVEVFEGLMD
FQAATDAIKCRAFQIALTGSARLCYRRLPARLISTYSQLRKEFITQFSSRHYDRKTATHLATIRQKEGETL