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Moc08g34960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g34960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like
Genome locationchr8:25558530..25559233
RNA-Seq ExpressionMoc08g34960
SyntenyMoc08g34960
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018001.1 Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-1863.64Show/hide
Query:  MSALVSDGFRNALFIRRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV
        +S LVSDG  NAL IRRGY A    A+ R     G   K E+AERS  EK+AWVPDPVTGYYRPEN +DEID VDLRAM+L+PRRK +
Subjt:  MSALVSDGFRNALFIRRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV

XP_022155319.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Momordica charantia]5.6e-1860.42Show/hide
Query:  MSALVSDGFRNALFIRRGYAAVAADRVVAKS----------GSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        MSAL+S    NALF R   AA AA + VA S          G   KKEEA RS+ EK+AWVPDPVTG+YRPENC+DEID  DLRA+LLKPRR I+N
Subjt:  MSALVSDGFRNALFIRRGYAAVAADRVVAKS----------GSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

XP_022155320.1 late embryogenis abundant protein 2-like [Momordica charantia]3.4e-39100Show/hide
Query:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        MSALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
Subjt:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

XP_022934354.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata]4.8e-1762.5Show/hide
Query:  MSALVSDGFRNALFIRRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV
        +S LVSDG   AL IRRGY A    A+ R     G   K E+AERS  EK+AWVPDPVTGYYRPEN +DEID VDLRAM+L+PRRK +
Subjt:  MSALVSDGFRNALFIRRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV

XP_023528769.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo]3.3e-1863.64Show/hide
Query:  MSALVSDGFRNALFIRRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV
        +S LVSDG  NAL IRRGY A    A+ R     G   K+E+AERS  EK+AWVPDPVTGYYRPEN +DEID VDLRAM+L+PRRK +
Subjt:  MSALVSDGFRNALFIRRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV

TrEMBL top hitse value%identityAlignment
A0A6J1DM52 late embryogenis abundant protein 2-like1.6e-39100Show/hide
Query:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        MSALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
Subjt:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

A0A6J1DPX0 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like2.7e-1860.42Show/hide
Query:  MSALVSDGFRNALFIRRGYAAVAADRVVAKS----------GSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        MSAL+S    NALF R   AA AA + VA S          G   KKEEA RS+ EK+AWVPDPVTG+YRPENC+DEID  DLRA+LLKPRR I+N
Subjt:  MSALVSDGFRNALFIRRGYAAVAADRVVAKS----------GSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

A0A6J1F2C1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like2.3e-1762.5Show/hide
Query:  MSALVSDGFRNALFIRRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV
        +S LVSDG   AL IRRGY A    A+ R     G   K E+AERS  EK+AWVPDPVTGYYRPEN +DEID VDLRAM+L+PRRK +
Subjt:  MSALVSDGFRNALFIRRGYAA---VAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIV

A0A6J1GC45 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like3.0e-1765.85Show/hide
Query:  SALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK
        SALVSDG  N LF RRGYAA A   V A+ G+KT K      + EK +WVPDPVTGYYRPENCA EID  DLRAMLLK  RK
Subjt:  SALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK

A0A6J1K940 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like3.3e-1663.64Show/hide
Query:  SALVSDGFRNALFIRRGYAAV------AADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK
        SALVSDG  N LF RRGYAAV      AA  V A+ G+KT K      + EK +WVPDPVTGYYRPENCA EID VDLRA+LLK  RK
Subjt:  SALVSDGFRNALFIRRGYAAV------AADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK

SwissProt top hitse value%identityAlignment
P32292 Indole-3-acetic acid-induced protein ARG24.5e-1048.24Show/hide
Query:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSGSKT-------KKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLL
        +SALV+DGF N    R G+AA AA    A  G  +       K  E +    EK++WVPDPVTGYYRPEN  +EID  D+RA +L
Subjt:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSGSKT-------KKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLL

P46522 Late embryogenesis abundant protein Lea5-D1.9e-0842.39Show/hide
Query:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSG-----SKTKKEEA--ERSTEE----KMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPR
        + A + DG   ++  RRGY+      V A  G      K ++ +A  E S+ E      AW PDPVTGYYRPENC  EID  +LR MLL  R
Subjt:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSG-----SKTKKEEA--ERSTEE----KMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPR

Q39644 Late embryogenesis abundant protein Lea51.3e-0946.84Show/hide
Query:  ALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEE---KMAWVPDPVTGYYRPENCADEIDPVDLRAMLL
        A V+DG   ++  RRGYAA A    ++++G   K +      E+     AW PDP+TGYYRPEN A EIDP +LR MLL
Subjt:  ALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEE---KMAWVPDPVTGYYRPENCADEIDPVDLRAMLL

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial1.4e-1148.31Show/hide
Query:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        +SA VS    NA+F RRGYAA AA   V+  G       +  KK+  E ST +K++WVPDP TGYYRPE  ++EID  +LRA LL  ++
Subjt:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

Q9SRX6 Late embryogenis abundant protein 23.1e-1144.44Show/hide
Query:  SALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        S   S+   NA+F RRG+AA A   +     +   K+ A  ++ EK  WVPDP TGYYRPE  ++EIDP +LRA+LL  ++
Subjt:  SALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein2.2e-1244.44Show/hide
Query:  SALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        S   S+   NA+F RRG+AA A   +     +   K+ A  ++ EK  WVPDP TGYYRPE  ++EIDP +LRA+LL  ++
Subjt:  SALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

AT3G53770.2 late embryogenesis abundant 3 (LEA3) family protein6.2e-0740.74Show/hide
Query:  SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN
        +KT + + +    E++ W+PDP TGYYRP+N A E+D V+LR++     +K  N
Subjt:  SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN

AT4G02380.1 senescence-associated gene 219.9e-1348.31Show/hide
Query:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        +SA VS    NA+F RRGYAA AA   V+  G       +  KK+  E ST +K++WVPDP TGYYRPE  ++EID  +LRA LL  ++
Subjt:  MSALVSDGFRNALFIRRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

AT4G02380.2 senescence-associated gene 213.5e-1047.3Show/hide
Query:  RRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR
        +RGYAA AA   V+  G       +  KK+  E ST +K++WVPDP TGYYRPE  ++EID  +LRA LL  ++
Subjt:  RRGYAAVAADRVVAKSG-------SKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRR

AT4G15910.1 drought-induced 211.7e-0944.3Show/hide
Query:  ALFIRRGYAAVAADRVVA---KSGSKT----KKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK
        ++ +RR Y A + +   A   K GS      K E+     E + AW PDPVTGYYRP N A EIDP +LR +LLK + K
Subjt:  ALFIRRGYAAVAADRVVA---KSGSKT----KKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCCCTCGTCTCCGATGGATTCCGTAACGCTCTCTTCATCAGGCGAGGATATGCGGCGGTGGCGGCGGATAGAGTTGTGGCAAAAAGTGGCAGCAAAACG
AAGAAGGAAGAAGCAGAAAGAAGTACAGAAGAGAAGATGGCGTGGGTCCCTGATCCGGTGACCGGTTACTACCGGCCGGAGAACTGCGCCGACGAGATCGATCCC
GTCGACCTCCGTGCTATGCTTCTGAAGCCGAGAAGAAAAATAGTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGCCCTCGTCTCCGATGGATTCCGTAACGCTCTCTTCATCAGGCGAGGATATGCGGCGGTGGCGGCGGATAGAGTTGTGGCAAAAAGTGGCAGCAAAACG
AAGAAGGAAGAAGCAGAAAGAAGTACAGAAGAGAAGATGGCGTGGGTCCCTGATCCGGTGACCGGTTACTACCGGCCGGAGAACTGCGCCGACGAGATCGATCCC
GTCGACCTCCGTGCTATGCTTCTGAAGCCGAGAAGAAAAATAGTCAATTAA
Protein sequenceShow/hide protein sequence
MSALVSDGFRNALFIRRGYAAVAADRVVAKSGSKTKKEEAERSTEEKMAWVPDPVTGYYRPENCADEIDPVDLRAMLLKPRRKIVN