; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g35330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g35330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr8:25907222..25907769
RNA-Seq ExpressionMoc08g35330
SyntenyMoc08g35330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137317.1 uncharacterized protein LOC111008813 [Momordica charantia]2.4e-4364.78Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQ-----------------
        REEFDQLRG+LDAQVEALKAKCEQK+  LNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDG+KDPKDYVEVFE LMDFQ                    
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQ-----------------

Query:  ---------TQSNVAPFKSRLLAARDCGTGDCQPATHLATIRQKEGETLREYVTRFQEE
                 + S  +  +   LA       D + ATHLATIRQKEGETLREYVTRFQEE
Subjt:  ---------TQSNVAPFKSRLLAARDCGTGDCQPATHLATIRQKEGETLREYVTRFQEE

XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]4.9e-4466.67Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFK--------
        REEFDQLRG+LDAQ EALKAKCEQK+  LNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDG+KDPKDYVEVFEGLMDFQ          F+        
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFK--------

Query:  --SRLLAARDCGT----------------GDCQPATHLATIRQKEGETLREYVTRFQEE
           R L AR   T                 D + ATHLATIRQKEGETLREYVTRFQEE
Subjt:  --SRLLAARDCGT----------------GDCQPATHLATIRQKEGETLREYVTRFQEE

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]6.3e-4466.67Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFK--------
        REEFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDG++DPKDYVEVFEGLMDFQ          F+        
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFK--------

Query:  --SRLLAARDCGT----------------GDCQPATHLATIRQKEGETLREYVTRFQEE
           R L AR   T                 D + ATHLATIRQKEGETLREYVTRFQEE
Subjt:  --SRLLAARDCGT----------------GDCQPATHLATIRQKEGETLREYVTRFQEE

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]6.1e-4768.55Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQR-------------------
        REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQ                    
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQR-------------------

Query:  -------HQTQSNVAPFKSRLLAARDCGTGDCQPATHLATIRQKEGETLREYVTRFQEE
                ++ S  +  +   LA       D + ATHLATIRQKEGETLREYVTRFQEE
Subjt:  -------HQTQSNVAPFKSRLLAARDCGTGDCQPATHLATIRQKEGETLREYVTRFQEE

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]1.4e-4375.19Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFKSRLLAARD
        REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGE PFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQ          F+  L     
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFKSRLLAARD

Query:  CGTGDCQPATHLATIRQKEGETLREYVTRFQEE
          TG  +        RQKE ETLREYVTRFQEE
Subjt:  CGTGDCQPATHLATIRQKEGETLREYVTRFQEE

TrEMBL top hitse value%identityAlignment
A0A6J1C7X5 uncharacterized protein LOC1110088131.2e-4364.78Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQ-----------------
        REEFDQLRG+LDAQVEALKAKCEQK+  LNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDG+KDPKDYVEVFE LMDFQ                    
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQ-----------------

Query:  ---------TQSNVAPFKSRLLAARDCGTGDCQPATHLATIRQKEGETLREYVTRFQEE
                 + S  +  +   LA       D + ATHLATIRQKEGETLREYVTRFQEE
Subjt:  ---------TQSNVAPFKSRLLAARDCGTGDCQPATHLATIRQKEGETLREYVTRFQEE

A0A6J1CKB3 uncharacterized protein LOC1110120812.4e-4466.67Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFK--------
        REEFDQLRG+LDAQ EALKAKCEQK+  LNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDG+KDPKDYVEVFEGLMDFQ          F+        
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFK--------

Query:  --SRLLAARDCGT----------------GDCQPATHLATIRQKEGETLREYVTRFQEE
           R L AR   T                 D + ATHLATIRQKEGETLREYVTRFQEE
Subjt:  --SRLLAARDCGT----------------GDCQPATHLATIRQKEGETLREYVTRFQEE

A0A6J1DDS5 uncharacterized protein LOC1110198423.1e-4466.67Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFK--------
        REEFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDG++DPKDYVEVFEGLMDFQ          F+        
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFK--------

Query:  --SRLLAARDCGT----------------GDCQPATHLATIRQKEGETLREYVTRFQEE
           R L AR   T                 D + ATHLATIRQKEGETLREYVTRFQEE
Subjt:  --SRLLAARDCGT----------------GDCQPATHLATIRQKEGETLREYVTRFQEE

A0A6J1DS95 uncharacterized protein LOC1110234213.0e-4768.55Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQR-------------------
        REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQ                    
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQR-------------------

Query:  -------HQTQSNVAPFKSRLLAARDCGTGDCQPATHLATIRQKEGETLREYVTRFQEE
                ++ S  +  +   LA       D + ATHLATIRQKEGETLREYVTRFQEE
Subjt:  -------HQTQSNVAPFKSRLLAARDCGTGDCQPATHLATIRQKEGETLREYVTRFQEE

A0A6J1DXR9 uncharacterized protein LOC1110251096.8e-4475.19Show/hide
Query:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFKSRLLAARD
        REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGE PFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQ          F+  L     
Subjt:  REEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSNVAPFKSRLLAARD

Query:  CGTGDCQPATHLATIRQKEGETLREYVTRFQEE
          TG  +        RQKE ETLREYVTRFQEE
Subjt:  CGTGDCQPATHLATIRQKEGETLREYVTRFQEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCAGCGAATTCGACCAATACGACGGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGAGTTCGACCAGCTGAGGGGGGAGCTCGATGCTCA
GGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGACGATTCACTGAACGACGGCGACTTGGGAGAATCGCCTTTCACCTCGGACGTTTTGGAAGCACCAATCCCTCCGA
AGTTCAAAGCTCCTACCGTGAAGCCTTATGACGGGACGAAGGACCCCAAGGACTATGTTGAGGTCTTTGAAGGTCTCATGGACTTCCAGCGGCATCAGACGCAATCAAAT
GTCGCGCCTTTCAAATCGCGCTTACTGGCAGCGCGCGATTGTGGTACCGGAGACTGCCAGCCAGCGACCCATCTCGCCACCATCAGGCAGAAGGAGGGTGAGACGCTGCG
GGAGTATGTCACCAGATTCCAGGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCAGCGAATTCGACCAATACGACGGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGAGTTCGACCAGCTGAGGGGGGAGCTCGATGCTCA
GGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGACGATTCACTGAACGACGGCGACTTGGGAGAATCGCCTTTCACCTCGGACGTTTTGGAAGCACCAATCCCTCCGA
AGTTCAAAGCTCCTACCGTGAAGCCTTATGACGGGACGAAGGACCCCAAGGACTATGTTGAGGTCTTTGAAGGTCTCATGGACTTCCAGCGGCATCAGACGCAATCAAAT
GTCGCGCCTTTCAAATCGCGCTTACTGGCAGCGCGCGATTGTGGTACCGGAGACTGCCAGCCAGCGACCCATCTCGCCACCATCAGGCAGAAGGAGGGTGAGACGCTGCG
GGAGTATGTCACCAGATTCCAGGAGGAATAG
Protein sequenceShow/hide protein sequence
MVQPANSTNTTDRRTLAASDAHQREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQRHQTQSN
VAPFKSRLLAARDCGTGDCQPATHLATIRQKEGETLREYVTRFQEE