; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g35580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g35580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr8:26131210..26136259
RNA-Seq ExpressionMoc08g35580
SyntenyMoc08g35580
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RHN55891.1 putative RNA-directed DNA polymerase [Medicago truncatula]6.1e-3127.73Show/hide
Query:  RAIGALSKVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPH-DVKVADLINPNG-KWDAYLISNIF---------------------------
        R++ +   +L  G R ++G+GS IN++S PWI    + +P T P   H D+ V+ L+N +G  W+  ++ ++F                           
Subjt:  RAIGALSKVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPH-DVKVADLINPNG-KWDAYLISNIF---------------------------

Query:  -------------CS----------RGYNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKM-ESTSHSIFLCKRAKKIWNLM--
                     CS            Y W + W L++P +++ FLW+   + +PT  NL  RGI     CIFC +  E+ +H  F+C +A   W L+  
Subjt:  -------------CS----------RGYNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKM-ESTSHSIFLCKRAKKIWNLM--

Query:  ---FPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPP
              L  S  +    F D    L D+L+PQQ+ L A T W++W  RNS    ++ +TP             +S  Q  K      +SV      W+ P
Subjt:  ---FPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPP

Query:  CDSAMKVNSDAACRSTST--GLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESD
            +K N DAA  + ++  G G+  RD+ G  L+ KS F       L AE   +L+A+KLA S     ++ E+D
Subjt:  CDSAMKVNSDAACRSTST--GLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESD

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]2.1e-3126.86Show/hide
Query:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIFCSR---------------------------------
        ++L  GLR RVGNG +I +++D W+  P  F+ ++ P  P    V DL   +G+W+  L+ +IF  +                                 
Subjt:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIFCSR---------------------------------

Query:  GYN-----------------------WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIFLCKRAKKIWNLMFPSLF
        GY                        WK  W LK+P+KIK FLW+   + +P  Q L NR I   P C  C  K ES  H+++LC+ AK++W        
Subjt:  GYN-----------------------WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIFLCKRAKKIWNLMFPSLF

Query:  TSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQE-NKRISPQQSSVPPPFCRWLPPCDSAMKV
              N SF ++W  L    + +++ L A+ CW +W  RNS        T     + ++   Q +S A   +  I  +QSS   P   W PP     K+
Subjt:  TSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQE-NKRISPQQSSVPPPFCRWLPPCDSAMKV

Query:  NSDAACRSTST--GLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLV
        N D A +S  +  G+G+++R+  G  + A    +         E+   +E L+ A    +T  V+E D Q+ I  +
Subjt:  NSDAACRSTST--GLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLV

XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]7.3e-10994.29Show/hide
Query:  MESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKR
        ME TSH I LCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFT WAIWCDRNS AHGSSVSTPALRCNWISSYFQNYSQAQENKR
Subjt:  MESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKR

Query:  ISPQQSSVPPPFCRWLPPCDSAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQ
        ISPQQSSVPPP CRWLPP DSAMKVNSDAACRSTSTGLGLIIRDH GVLLVAKS+FLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQE IRLVQ
Subjt:  ISPQQSSVPPPFCRWLPPCDSAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQ

Query:  GDLFSMGEKM
        GDLFSMGE++
Subjt:  GDLFSMGEKM

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-7539.38Show/hide
Query:  VLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIFCS-----------------------------------
        +L+ GLR RVGNGSTI  FSDPW+ RP +F+P+    G  D  VA  I  +G WD   IS+ FC+                                   
Subjt:  VLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIFCS-----------------------------------

Query:  ------------------RGYNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCA-KMESTSHSIFLCKRAKKIWNLMFPSLFTSPI
                          RG  W + W+L VP+KIK+F+W++ H HIPT QNL  RGI  +P C  C  + ES  H+ F CKRA++IW  +FP L     
Subjt:  ------------------RGYNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCA-KMESTSHSIFLCKRAKKIWNLMFPSLFTSPI

Query:  NGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDAA
          N+SF+++W  L ++L P+  +LAA T W IW DRNS+ HG  VS    +C W++ +  ++SQAQ +      QS+  P    W P    ++K+N+DAA
Subjt:  NGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDAA

Query:  CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGEKMNWIMEI
        CR  ST  G IIRD    L+ A S+ +P PL+PL AEIR ILE LK AA+ ++T L VESD    I+L++ ++ + G++ NW+MEI
Subjt:  CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGEKMNWIMEI

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.1e-3228.61Show/hide
Query:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLI---------------------------------SNIFCSR
        +V+  G+R R+GNG  I IFSD W+ RP +FRPI     P    VADLI  + +WD   +                                  N     
Subjt:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLI---------------------------------SNIFCSR

Query:  GYN--------------------WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIFLCKRAKKIWNLMFPSLFTSP
        GY                     W   W L++P K+K+F+W+A +N +P+ +NL  R +   P C  C   +E+ SH++  CK A+KIW     S F++P
Subjt:  GYN--------------------WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIFLCKRAKKIWNLMFPSLFTSP

Query:  INGNLSFMDIWLLLYD---KLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQS----SVPPPFCRWLPPCDSA
             +  DI+  L +   +L     +L    CW+ W  RN          P +      S    + + ++     PQQS    S+      WLPP  + 
Subjt:  INGNLSFMDIWLLLYD---KLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQS----SVPPPFCRWLPPCDSA

Query:  MKVNSDAA--CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGE
         KVN DAA   ++ S G+G +IRD  G ++ A      +  +   AE   +L  L+LA +   + L++ESDC EV++LV     S  E
Subjt:  MKVNSDAA--CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGE

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein8.8e-3627.76Show/hide
Query:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKW------------DAYLIS---------------------NIFCSR
        +V++ G+R R+G G  + I+   WI RP +F+PI+AP    D  VA+LI+ N KW            DA LIS                     N     
Subjt:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKW------------DAYLIS---------------------NIFCSR

Query:  GY--------------------NWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIFLCKRAKKIWNLMFPSLFTSP
        GY                     W   W L++P KIK+F+WKA  N +PT++NL  R +   P C  C  K E  +H+I +CK AKK+W L  P +    
Subjt:  GY--------------------NWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIFLCKRAKKIWNLMFPSLFTSP

Query:  INGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDA
        +  N   + +   L ++ +  +  L    CW  W  RN     +    P +      +  ++Y++ +  K +     ++P    +W+PP     K N DA
Subjt:  INGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDA

Query:  AC--RSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGEKMNWIMEI
        A        GLG++IRD  G +++A         +   AE   +   L++    S + L++E+DCQ+V+  V  +  S  E    I EI
Subjt:  AC--RSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGEKMNWIMEI

A0A6J1BQ49 uncharacterized protein LOC1110047863.5e-10994.29Show/hide
Query:  MESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKR
        ME TSH I LCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFT WAIWCDRNS AHGSSVSTPALRCNWISSYFQNYSQAQENKR
Subjt:  MESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKR

Query:  ISPQQSSVPPPFCRWLPPCDSAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQ
        ISPQQSSVPPP CRWLPP DSAMKVNSDAACRSTSTGLGLIIRDH GVLLVAKS+FLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQE IRLVQ
Subjt:  ISPQQSSVPPPFCRWLPPCDSAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQ

Query:  GDLFSMGEKM
        GDLFSMGE++
Subjt:  GDLFSMGEKM

A0A6J1DX30 uncharacterized protein LOC1110248745.1e-7639.38Show/hide
Query:  VLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIFCS-----------------------------------
        +L+ GLR RVGNGSTI  FSDPW+ RP +F+P+    G  D  VA  I  +G WD   IS+ FC+                                   
Subjt:  VLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIFCS-----------------------------------

Query:  ------------------RGYNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCA-KMESTSHSIFLCKRAKKIWNLMFPSLFTSPI
                          RG  W + W+L VP+KIK+F+W++ H HIPT QNL  RGI  +P C  C  + ES  H+ F CKRA++IW  +FP L     
Subjt:  ------------------RGYNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCA-KMESTSHSIFLCKRAKKIWNLMFPSLFTSPI

Query:  NGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDAA
          N+SF+++W  L ++L P+  +LAA T W IW DRNS+ HG  VS    +C W++ +  ++SQAQ +      QS+  P    W P    ++K+N+DAA
Subjt:  NGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDAA

Query:  CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGEKMNWIMEI
        CR  ST  G IIRD    L+ A S+ +P PL+PL AEIR ILE LK AA+ ++T L VESD    I+L++ ++ + G++ NW+MEI
Subjt:  CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGEKMNWIMEI

A0A803NHG3 Uncharacterized protein5.7e-3527.89Show/hide
Query:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIF---------------------------------CSR
        +++L G R RVGNG  + +  DPW+ RP SF+    P  P  + V DL +P+G WD   I   F                                    
Subjt:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIF---------------------------------CSR

Query:  GYN--------------------WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAK--MESTSHSIFLCKRAKKIWNLMFPSLFTS
        GY                     W+  W+LK+P K+K F WK  ++ +PT  NL  R +   P C  C+    E+  H+++ C   K IW L   S F +
Subjt:  GYN--------------------WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAK--MESTSHSIFLCKRAKKIWNLMFPSLFTS

Query:  PI--NGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNY-----SQAQENKRISPQQSSVPPPFCRWLPPCDS
         I   G    +   + L   +N    +     CW +W  RNS  HG  +  PA    W   Y   Y      Q ++ +R   QQS       RW PP   
Subjt:  PI--NGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNY-----SQAQENKRISPQQSSVPPPFCRWLPPCDS

Query:  AMKVNSDAACRSTS--TGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLV
         +K+N D   R     + +G ++R+  G  + A +  LP   +PL  E++ I   L+    R + R  VESDC+E I L+
Subjt:  AMKVNSDAACRSTS--TGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLV

A0A803QQT2 Uncharacterized protein9.8e-3527.51Show/hide
Query:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIF------------CS---------------------R
        K++L G R RVGNG ++ +  DPW+ RP +F+    P  P ++ V DL   +G+WD   I +IF            CS                      
Subjt:  KVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIF------------CS---------------------R

Query:  GYN--------------------WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKM--ESTSHSIFLCKRAKKIWNL--MFPSLF
        GY                     WK  W LK+P K+K F+WK  HN +P   NL  RGI     C  C+    ES +H+++ CK +K  W +  ++  L 
Subjt:  GYN--------------------WKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKM--ESTSHSIFLCKRAKKIWNL--MFPSLF

Query:  TSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNY--SQAQENKRISPQQSSVPPPFCRWLPPCDSAMK
              NL+ +      +DK   ++ +      W IW  RN++ HG     P     W  ++  ++     +E  + S + S       RW+PP    + 
Subjt:  TSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNY--SQAQENKRISPQQSSVPPPFCRWLPPCDSAMK

Query:  VNSDAACRSTS--TGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQ
        +N DA  +     +GLG ++RD  GV+L A +  L   L PL  E+  I + +++   +   R  VE+DC + + L+Q
Subjt:  VNSDAACRSTS--TGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein5.3e-0925.67Show/hide
Query:  KIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKMESTSHSIFLCKRAKKIWNLMFPSL----FTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCW
        KIKLFLWKA    +P    L  R I    DC  C   E+++H +F C  A ++WNL    L      +PI   L+ +   ++L   +      L  + CW
Subjt:  KIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKMESTSHSIFLCKRAKKIWNLMFPSL----FTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCW

Query:  AIWCDRNSM----AHGSSVSTPALRCNWISSYFQNYSQAQENKRI-SPQQSSVPPPFCRWLPPCDSAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSL
         IW  RN +    +H S + T   +    +  +Q+   A    R+ +P+ +S       +L   D+A +  S  A     +G       H    +   S 
Subjt:  AIWCDRNSM----AHGSSVSTPALRCNWISSYFQNYSQAQENKRI-SPQQSSVPPPFCRWLPPCDSAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSL

Query:  FLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGEKMNWIMEI
              +PL AE   I  A+  A     + L+V SD + ++  +  ++ S+ E    ++EI
Subjt:  FLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGEKMNWIMEI

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-0725Show/hide
Query:  CIFCA-KMESTSHSIFLCKRAKKIWNLM-FPSLFTSPINGNLSFMDIWLLLYDKLNPQQ---RDLAAFTCWAIWCDRNS-MAHGSSVSTPALRCNWISSY
        C+ C    E+ +H +F C  A+ +W +   P+        +L     W+L  +   P+     +L  +  W +W  RN  M  G     P +    +   
Subjt:  CIFCA-KMESTSHSIFLCKRAKKIWNLM-FPSLFTSPINGNLSFMDIWLLLYDKLNPQQ---RDLAAFTCWAIWCDRNS-MAHGSSVSTPALRCNWISSY

Query:  FQNYSQAQ--ENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDAA--CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYT
        F+ +S  +  E K   PQ         +W  P    +K N+DA     +   G+G I+R+  G +L   +  LP   N L AE+  +  A+   +  +Y 
Subjt:  FQNYSQAQ--ENKRISPQQSSVPPPFCRWLPPCDSAMKVNSDAA--CRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYT

Query:  RLVVESDCQEVIRLVQGDLF
        R++ ESD Q ++ L+  D F
Subjt:  RLVVESDCQEVIRLVQGDLF

AT3G09510.1 Ribonuclease H-like superfamily protein1.2e-2128.91Show/hide
Query:  WELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRD---
        W L +  K+K FLW+A    + TT+ L  RG+ + P C  C  + ES +H++F C  A   W L   SL  + +  N    +I  +L    +    D   
Subjt:  WELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFC-AKMESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRD---

Query:  -LAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQS-SVPPPFCRWLPPCDSAMKVNSDAAC---RSTSTGLGLIIRDHLGV
         L  +  W IW  RN++       +P+       +   ++  A ++ + +P  +  +      W  P  + +K N DA     +  +TG G IIR+H G 
Subjt:  -LAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQS-SVPPPFCRWLPPCDSAMKVNSDAAC---RSTSTGLGLIIRDHLGV

Query:  LLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLF
         +   S+ L    NPL AE + +L AL+    R YT++ +E DCQ +I L+ G  F
Subjt:  LLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLF

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.9e-0838.46Show/hide
Query:  NW-KTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKMESTSHSIFLCKRAKK
        NW    W LK+  KIKL +WKA +N +P    L +R I + P C  C   E+ +H +F C  A++
Subjt:  NW-KTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRGIDVVPDCIFCAKMESTSHSIFLCKRAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAGTGTCAGAGAGTCGTTAGAGCAACGTCAGAAGCTCTATCGAAGTTCATCTCTATAAGTAGAGACCCCGCCTCCCACGAAAGATACTTTAGACTTCACACATC
TCATCCAAGCTTCATGGAATACGAGTTTGATCATTTTCATGATCAAATAGTTACTAAAGGGTTCATTTGCTCAGCAAGGCTTGCCAAAGTCGAGCCATATTTTACTGATC
ATTGGTTGACATTTTCAAAGGACGAGTCTACCTTGAAAAGTACCTGCAAGTGCAAAGCACCAAACATAATCTCAAACAAGGCACTGAGAATCAGGGGTGGTCGAAGAGCC
ATTGGAGCACTCTCGAAAGTCCTGTTGGGAGGGTTGCGTTCTAGAGTTGGCAATGGTTCGACCATTAATATCTTCTCAGATCCCTGGATTCTGCGACCCTATTCCTTTCG
TCCTATCACAGCACCTTTTGGTCCTCATGATGTTAAAGTGGCAGACCTTATCAATCCTAATGGAAAATGGGACGCTTATCTAATCTCTAACATTTTTTGCTCTAGGGGAT
ATAATTGGAAGACTTTTTGGGAGCTAAAGGTTCCTTCTAAGATTAAGCTATTCCTATGGAAAGCAGGTCATAATCACATCCCAACAACCCAAAATCTTAGAAATCGTGGA
ATTGATGTGGTACCTGATTGTATATTTTGTGCTAAGATGGAAAGTACTTCTCACTCTATCTTCCTCTGCAAAAGGGCTAAGAAAATCTGGAATCTGATGTTCCCATCTCT
CTTCACTTCTCCAATAAATGGAAATCTCAGTTTTATGGACATTTGGCTGCTTCTTTATGATAAACTAAATCCACAGCAGAGAGATCTTGCTGCTTTTACCTGTTGGGCAA
TTTGGTGTGATCGGAATTCTATGGCCCATGGTTCTTCTGTCTCCACCCCTGCTTTAAGGTGCAATTGGATTAGTTCCTATTTTCAGAATTACTCACAGGCTCAAGAAAAC
AAGAGAATCTCACCGCAGCAGAGCTCGGTCCCTCCCCCATTCTGTCGTTGGCTTCCTCCTTGCGACTCAGCTATGAAGGTGAACTCTGATGCAGCCTGCCGTTCTACATC
AACAGGACTAGGTCTTATTATTAGAGACCATTTGGGGGTTTTGTTGGTAGCGAAATCACTGTTTCTGCCGATGCCATTGAACCCTCTTTTTGCTGAAATCAGAGGAATTT
TGGAAGCTCTAAAGCTCGCTGCCTCACGGAGTTACACTCGCCTGGTTGTAGAATCTGATTGCCAAGAAGTCATTCGCCTCGTTCAAGGAGATCTGTTTTCGATGGGAGAA
AAAATGAATTGGATTATGGAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAGTGTCAGAGAGTCGTTAGAGCAACGTCAGAAGCTCTATCGAAGTTCATCTCTATAAGTAGAGACCCCGCCTCCCACGAAAGATACTTTAGACTTCACACATC
TCATCCAAGCTTCATGGAATACGAGTTTGATCATTTTCATGATCAAATAGTTACTAAAGGGTTCATTTGCTCAGCAAGGCTTGCCAAAGTCGAGCCATATTTTACTGATC
ATTGGTTGACATTTTCAAAGGACGAGTCTACCTTGAAAAGTACCTGCAAGTGCAAAGCACCAAACATAATCTCAAACAAGGCACTGAGAATCAGGGGTGGTCGAAGAGCC
ATTGGAGCACTCTCGAAAGTCCTGTTGGGAGGGTTGCGTTCTAGAGTTGGCAATGGTTCGACCATTAATATCTTCTCAGATCCCTGGATTCTGCGACCCTATTCCTTTCG
TCCTATCACAGCACCTTTTGGTCCTCATGATGTTAAAGTGGCAGACCTTATCAATCCTAATGGAAAATGGGACGCTTATCTAATCTCTAACATTTTTTGCTCTAGGGGAT
ATAATTGGAAGACTTTTTGGGAGCTAAAGGTTCCTTCTAAGATTAAGCTATTCCTATGGAAAGCAGGTCATAATCACATCCCAACAACCCAAAATCTTAGAAATCGTGGA
ATTGATGTGGTACCTGATTGTATATTTTGTGCTAAGATGGAAAGTACTTCTCACTCTATCTTCCTCTGCAAAAGGGCTAAGAAAATCTGGAATCTGATGTTCCCATCTCT
CTTCACTTCTCCAATAAATGGAAATCTCAGTTTTATGGACATTTGGCTGCTTCTTTATGATAAACTAAATCCACAGCAGAGAGATCTTGCTGCTTTTACCTGTTGGGCAA
TTTGGTGTGATCGGAATTCTATGGCCCATGGTTCTTCTGTCTCCACCCCTGCTTTAAGGTGCAATTGGATTAGTTCCTATTTTCAGAATTACTCACAGGCTCAAGAAAAC
AAGAGAATCTCACCGCAGCAGAGCTCGGTCCCTCCCCCATTCTGTCGTTGGCTTCCTCCTTGCGACTCAGCTATGAAGGTGAACTCTGATGCAGCCTGCCGTTCTACATC
AACAGGACTAGGTCTTATTATTAGAGACCATTTGGGGGTTTTGTTGGTAGCGAAATCACTGTTTCTGCCGATGCCATTGAACCCTCTTTTTGCTGAAATCAGAGGAATTT
TGGAAGCTCTAAAGCTCGCTGCCTCACGGAGTTACACTCGCCTGGTTGTAGAATCTGATTGCCAAGAAGTCATTCGCCTCGTTCAAGGAGATCTGTTTTCGATGGGAGAA
AAAATGAATTGGATTATGGAAATTTGA
Protein sequenceShow/hide protein sequence
MSECQRVVRATSEALSKFISISRDPASHERYFRLHTSHPSFMEYEFDHFHDQIVTKGFICSARLAKVEPYFTDHWLTFSKDESTLKSTCKCKAPNIISNKALRIRGGRRA
IGALSKVLLGGLRSRVGNGSTINIFSDPWILRPYSFRPITAPFGPHDVKVADLINPNGKWDAYLISNIFCSRGYNWKTFWELKVPSKIKLFLWKAGHNHIPTTQNLRNRG
IDVVPDCIFCAKMESTSHSIFLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTCWAIWCDRNSMAHGSSVSTPALRCNWISSYFQNYSQAQEN
KRISPQQSSVPPPFCRWLPPCDSAMKVNSDAACRSTSTGLGLIIRDHLGVLLVAKSLFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEVIRLVQGDLFSMGE
KMNWIMEI