; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g35780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g35780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr8:26381584..26384139
RNA-Seq ExpressionMoc08g35780
SyntenyMoc08g35780
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR013010 - Zinc finger, SIAH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044286 - E3 ubiquitin-protein ligase SINA-like, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143325.1 E3 ubiquitin-protein ligase SINA-like 10 [Momordica charantia]3.7e-6655.33Show/hide
Query:  SETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYE
        +E MN+I +DPQLLDCYIC EPLSAP+FQC+NGHI+CSSCC K  N+C SC L IG++ CR IEK+LES+K  C NSIYGCK  +  N+ NDH SLC YE
Subjt:  SETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYE

Query:  PCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERV
        PCSCP+S+C FVGSS                                     Q + D  L+ LS+T E FGNA TVSRIG S S +KF YEIKAK +  +
Subjt:  PCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERV

Query:  LCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW
        LCLQSIAKEI+ +VEV  PSN SLLIP +FF SS++  LE RIW
Subjt:  LCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW

XP_022143326.1 putative E3 ubiquitin-protein ligase SINA-like 6 isoform X1 [Momordica charantia]3.5e-12085.27Show/hide
Query:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
        MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHM CRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
Subjt:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH

Query:  ESLCVYEPCSCPLSNCSFVGSSG-------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEI
        ESLCVYEPCSCPLSNCSFVGSSG                                     QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEI
Subjt:  ESLCVYEPCSCPLSNCSFVGSSG-------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEI

Query:  KAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIWWRASQN
        KAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIWWRASQN
Subjt:  KAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIWWRASQN

XP_022143327.1 E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Momordica charantia]1.1e-9470.92Show/hide
Query:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
        MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCC K HN CSSCG EIGHM CRPIEKLLES+K  CRNS YGCK MIYWNKINDH
Subjt:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH

Query:  ESLCVYEPCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIK
        +S C+YEPCSCP S+CSFVGSSG                                    +E+ D TLY+LSYTSEPFGN ATVSRIGRS S RKFHYEIK
Subjt:  ESLCVYEPCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIK

Query:  AKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW
        A+AEE VL  QSIAKEI+A+VEV  PS GSLLIP+DFF+SSS  TLE+RIW
Subjt:  AKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW

XP_022143328.1 E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Momordica charantia]9.8e-9169.51Show/hide
Query:  ENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCV
        E SETMNL+LTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCC K HN CSSCG EIGHM CRPIEKLLES+K  CRNS YGCK MIYWNKINDH+S C+
Subjt:  ENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCV

Query:  YEPCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEE
        YEPCSCP S+CSFVGSSG                                    +E+ D TLY+LSYTSEPFGN ATVSRIGRS S RKFHYEIKA+AEE
Subjt:  YEPCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEE

Query:  RVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW
         VL  QSIAKEI+A+VEV  PS GSLLIP+DFF+SSS  TLE+RIW
Subjt:  RVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW

XP_022143329.1 putative E3 ubiquitin-protein ligase SINA-like 6 isoform X4 [Momordica charantia]9.4e-12699.55Show/hide
Query:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
        MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHM CRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
Subjt:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH

Query:  ESLCVYEPCSCPLSNCSFVGSSGQEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKD
        ESLCVYEPCSCPLSNCSFVGSSGQEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKD
Subjt:  ESLCVYEPCSCPLSNCSFVGSSGQEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKD

Query:  FFESSSRQTLEIRIWWRASQN
        FFESSSRQTLEIRIWWRASQN
Subjt:  FFESSSRQTLEIRIWWRASQN

TrEMBL top hitse value%identityAlignment
A0A6J1CNI1 RING-type E3 ubiquitin transferase1.8e-6655.33Show/hide
Query:  SETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYE
        +E MN+I +DPQLLDCYIC EPLSAP+FQC+NGHI+CSSCC K  N+C SC L IG++ CR IEK+LES+K  C NSIYGCK  +  N+ NDH SLC YE
Subjt:  SETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYE

Query:  PCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERV
        PCSCP+S+C FVGSS                                     Q + D  L+ LS+T E FGNA TVSRIG S S +KF YEIKAK +  +
Subjt:  PCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERV

Query:  LCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW
        LCLQSIAKEI+ +VEV  PSN SLLIP +FF SS++  LE RIW
Subjt:  LCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW

A0A6J1CP04 putative E3 ubiquitin-protein ligase SINA-like 6 isoform X44.5e-12699.55Show/hide
Query:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
        MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHM CRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
Subjt:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH

Query:  ESLCVYEPCSCPLSNCSFVGSSGQEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKD
        ESLCVYEPCSCPLSNCSFVGSSGQEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKD
Subjt:  ESLCVYEPCSCPLSNCSFVGSSGQEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKD

Query:  FFESSSRQTLEIRIWWRASQN
        FFESSSRQTLEIRIWWRASQN
Subjt:  FFESSSRQTLEIRIWWRASQN

A0A6J1CPY7 RING-type E3 ubiquitin transferase1.7e-12085.27Show/hide
Query:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
        MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHM CRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
Subjt:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH

Query:  ESLCVYEPCSCPLSNCSFVGSSG-------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEI
        ESLCVYEPCSCPLSNCSFVGSSG                                     QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEI
Subjt:  ESLCVYEPCSCPLSNCSFVGSSG-------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEI

Query:  KAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIWWRASQN
        KAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIWWRASQN
Subjt:  KAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIWWRASQN

A0A6J1CQF8 RING-type E3 ubiquitin transferase4.7e-9169.51Show/hide
Query:  ENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCV
        E SETMNL+LTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCC K HN CSSCG EIGHM CRPIEKLLES+K  CRNS YGCK MIYWNKINDH+S C+
Subjt:  ENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCV

Query:  YEPCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEE
        YEPCSCP S+CSFVGSSG                                    +E+ D TLY+LSYTSEPFGN ATVSRIGRS S RKFHYEIKA+AEE
Subjt:  YEPCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEE

Query:  RVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW
         VL  QSIAKEI+A+VEV  PS GSLLIP+DFF+SSS  TLE+RIW
Subjt:  RVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW

A0A6J1CQH1 RING-type E3 ubiquitin transferase5.4e-9570.92Show/hide
Query:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH
        MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCC K HN CSSCG EIGHM CRPIEKLLES+K  CRNS YGCK MIYWNKINDH
Subjt:  MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDH

Query:  ESLCVYEPCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIK
        +S C+YEPCSCP S+CSFVGSSG                                    +E+ D TLY+LSYTSEPFGN ATVSRIGRS S RKFHYEIK
Subjt:  ESLCVYEPCSCPLSNCSFVGSSG------------------------------------QEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIK

Query:  AKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW
        A+AEE VL  QSIAKEI+A+VEV  PS GSLLIP+DFF+SSS  TLE+RIW
Subjt:  AKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIW

SwissProt top hitse value%identityAlignment
Q84K34 E3 ubiquitin-protein ligase SINA-like 102.9e-2946.36Show/hide
Query:  MNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYEPCS
        +++ L DP +LDC IC EPL  P+FQC NGH++C+ CC K  N+C SC L IG++ CR +EK++E+ +  C N+ YGCK    +     HE +CV+ PCS
Subjt:  MNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYEPCS

Query:  CPLSNCSFVG
        CP+ +C + G
Subjt:  CPLSNCSFVG

Q9C9M0 E3 ubiquitin-protein ligase SINA-like 47.2e-2843.86Show/hide
Query:  SETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCK-TMIYWNKINDHESLCVY
        S   ++ L +  +L+C  CF+PL  P+FQC NGH++C  CCIK   +CS C L IG + CR +EK++++    C N+IYGCK +  Y N++  HE +CV+
Subjt:  SETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCK-TMIYWNKINDHESLCVY

Query:  EPCSCPLSNCSFVG
         PCSCP+ +C+++G
Subjt:  EPCSCPLSNCSFVG

Q9FKD5 Putative E3 ubiquitin-protein ligase SINA-like 91.1e-2544.04Show/hide
Query:  LILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYEPCSCP
        ++L D  +LDC IC E L++P+FQC NGH++C SCC K  N+C +C L +GH   R +E +LES+   C N  +GC    ++ K + HE  C++  CSCP
Subjt:  LILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYEPCSCP

Query:  LSNCSFVGS
         S C + GS
Subjt:  LSNCSFVGS

Q9FKD7 E3 ubiquitin-protein ligase SINA-like 76.7e-2627.31Show/hide
Query:  KENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLC
        K +++  + +L D ++LDC IC+E  + P+FQC NGH++CSSCC K +N+C +C   +GH  CR +E +LES+   C N+  GCK  + + K   HE  C
Subjt:  KENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLC

Query:  VYEPCSCPLSNCSFVGSSGQ--------------------------------------EKVDETLYLLSYTSEPFGNAATVSRIG-RSMSMRKFHYEIKA
        ++  C+CP  +C++  S                                         E +   L+ +    EP+G   TVS I   S  + ++ Y +  
Subjt:  VYEPCSCPLSNCSFVGSSGQ--------------------------------------EKVDETLYLLSYTSEPFGNAATVSRIG-RSMSMRKFHYEIKA

Query:  KAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRI
          +   +  QS   +   ++   +P    +LIP           LE+RI
Subjt:  KAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRI

Q9FKD9 Putative E3 ubiquitin-protein ligase SINA-like 61.8e-3146.22Show/hide
Query:  GEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHES
        G K   +T + +LTD  +LDC IC++ L  P+FQC NGH++CSSCC K  N+C +C L +GH+ CR +E++LESV   CR +  GC   IY+ + + HE 
Subjt:  GEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHES

Query:  LCVYEPCSCPLSNCSFVGS
        +C + PCSCP+  C++ GS
Subjt:  LCVYEPCSCPLSNCSFVGS

Arabidopsis top hitse value%identityAlignment
AT1G66650.1 Protein with RING/U-box and TRAF-like domains5.1e-2943.86Show/hide
Query:  SETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCK-TMIYWNKINDHESLCVY
        S   ++ L +  +L+C  CF+PL  P+FQC NGH++C  CCIK   +CS C L IG + CR +EK++++    C N+IYGCK +  Y N++  HE +CV+
Subjt:  SETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCK-TMIYWNKINDHESLCVY

Query:  EPCSCPLSNCSFVG
         PCSCP+ +C+++G
Subjt:  EPCSCPLSNCSFVG

AT5G37870.1 Protein with RING/U-box and TRAF-like domains1.3e-3246.22Show/hide
Query:  GEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHES
        G K   +T + +LTD  +LDC IC++ L  P+FQC NGH++CSSCC K  N+C +C L +GH+ CR +E++LESV   CR +  GC   IY+ + + HE 
Subjt:  GEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHES

Query:  LCVYEPCSCPLSNCSFVGS
        +C + PCSCP+  C++ GS
Subjt:  LCVYEPCSCPLSNCSFVGS

AT5G37890.1 Protein with RING/U-box and TRAF-like domains4.8e-2727.31Show/hide
Query:  KENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLC
        K +++  + +L D ++LDC IC+E  + P+FQC NGH++CSSCC K +N+C +C   +GH  CR +E +LES+   C N+  GCK  + + K   HE  C
Subjt:  KENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLC

Query:  VYEPCSCPLSNCSFVGSSGQ--------------------------------------EKVDETLYLLSYTSEPFGNAATVSRIG-RSMSMRKFHYEIKA
        ++  C+CP  +C++  S                                         E +   L+ +    EP+G   TVS I   S  + ++ Y +  
Subjt:  VYEPCSCPLSNCSFVGSSGQ--------------------------------------EKVDETLYLLSYTSEPFGNAATVSRIG-RSMSMRKFHYEIKA

Query:  KAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRI
          +   +  QS   +   ++   +P    +LIP           LE+RI
Subjt:  KAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRI

AT5G37910.1 Protein with RING/U-box and TRAF-like domains8.1e-2744.04Show/hide
Query:  LILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYEPCSCP
        ++L D  +LDC IC E L++P+FQC NGH++C SCC K  N+C +C L +GH   R +E +LES+   C N  +GC    ++ K + HE  C++  CSCP
Subjt:  LILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYEPCSCP

Query:  LSNCSFVGS
         S C + GS
Subjt:  LSNCSFVGS

AT5G37930.1 Protein with RING/U-box and TRAF-like domains2.1e-3046.36Show/hide
Query:  MNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYEPCS
        +++ L DP +LDC IC EPL  P+FQC NGH++C+ CC K  N+C SC L IG++ CR +EK++E+ +  C N+ YGCK    +     HE +CV+ PCS
Subjt:  MNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYEPCS

Query:  CPLSNCSFVG
        CP+ +C + G
Subjt:  CPLSNCSFVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGCGAAAAGGAGAACAGCGAGACGATGAACCTCATACTCACTGATCCCCAGCTTCTTGATTGCTATATTTGCTTTGAACCCTTGTCCGCGCCTCTCTTTCAGTG
TAAGAATGGGCATATTTCTTGCTCTAGCTGCTGCATCAAAGCTCACAACCAATGCTCGAGCTGTGGCTTGGAAATTGGCCATATGAGTTGCAGACCAATCGAAAAGCTTC
TGGAGTCGGTCAAGAAGCATTGTCGAAACTCAATATACGGCTGCAAAACGATGATATATTGGAACAAGATAAATGACCACGAGTCATTGTGCGTGTATGAACCATGTTCA
TGCCCTTTATCCAATTGCTCATTTGTGGGTTCATCCGGGCAGGAAAAGGTAGATGAAACTCTGTACCTCCTCTCTTACACGTCCGAACCTTTTGGGAATGCAGCAACCGT
GAGTCGGATTGGACGTTCGATGTCGATGAGAAAGTTTCACTATGAAATCAAAGCAAAAGCTGAGGAGCGTGTTCTTTGTTTGCAATCAATAGCGAAGGAGATCCGAGCTC
AGGTTGAGGTTACCTCTCCTTCAAATGGATCCCTTTTGATTCCAAAGGACTTCTTTGAATCTTCATCCCGGCAGACCTTGGAGATACGCATCTGGTGGCGTGCAAGCCAA
AATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGCGAAAAGGAGAACAGCGAGACGATGAACCTCATACTCACTGATCCCCAGCTTCTTGATTGCTATATTTGCTTTGAACCCTTGTCCGCGCCTCTCTTTCAGTG
TAAGAATGGGCATATTTCTTGCTCTAGCTGCTGCATCAAAGCTCACAACCAATGCTCGAGCTGTGGCTTGGAAATTGGCCATATGAGTTGCAGACCAATCGAAAAGCTTC
TGGAGTCGGTCAAGAAGCATTGTCGAAACTCAATATACGGCTGCAAAACGATGATATATTGGAACAAGATAAATGACCACGAGTCATTGTGCGTGTATGAACCATGTTCA
TGCCCTTTATCCAATTGCTCATTTGTGGGTTCATCCGGGCAGGAAAAGGTAGATGAAACTCTGTACCTCCTCTCTTACACGTCCGAACCTTTTGGGAATGCAGCAACCGT
GAGTCGGATTGGACGTTCGATGTCGATGAGAAAGTTTCACTATGAAATCAAAGCAAAAGCTGAGGAGCGTGTTCTTTGTTTGCAATCAATAGCGAAGGAGATCCGAGCTC
AGGTTGAGGTTACCTCTCCTTCAAATGGATCCCTTTTGATTCCAAAGGACTTCTTTGAATCTTCATCCCGGCAGACCTTGGAGATACGCATCTGGTGGCGTGCAAGCCAA
AATTAG
Protein sequenceShow/hide protein sequence
MAGEKENSETMNLILTDPQLLDCYICFEPLSAPLFQCKNGHISCSSCCIKAHNQCSSCGLEIGHMSCRPIEKLLESVKKHCRNSIYGCKTMIYWNKINDHESLCVYEPCS
CPLSNCSFVGSSGQEKVDETLYLLSYTSEPFGNAATVSRIGRSMSMRKFHYEIKAKAEERVLCLQSIAKEIRAQVEVTSPSNGSLLIPKDFFESSSRQTLEIRIWWRASQ
N