; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g36000 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g36000
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiondouble-stranded RNA-binding protein 4-like isoform X2
Genome locationchr8:26584749..26588307
RNA-Seq ExpressionMoc08g36000
SyntenyMoc08g36000
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR011907 - Ribonuclease III
IPR014720 - Double-stranded RNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143454.1 double-stranded RNA-binding protein 4-like isoform X1 [Momordica charantia]9.6e-136100Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
        IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
        DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK

XP_022143455.1 double-stranded RNA-binding protein 4-like isoform X2 [Momordica charantia]4.5e-149100Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
        IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ
        DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ

XP_022935533.1 double-stranded RNA-binding protein 4-like isoform X2 [Cucurbita moschata]1.9e-9976.65Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVE SG + A   QQ SFPPDSA A VPA IPVE S   Q  +D RPP VLPDA+  PS+A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT 
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
         EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP+YTT  H+GSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
        DGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QK
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK

XP_022984143.1 double-stranded RNA-binding protein 4-like isoform X3 [Cucurbita maxima]1.9e-9976.65Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPP VLP A+  PS+A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT 
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
         EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP+YTT  H+GSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
        DGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QK
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK

XP_023526614.1 double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita pepo subsp. pepo]1.0e-10077.43Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPPSVLPDA+  PS A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT 
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
         EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP+YTT  H+GSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
        DGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QK
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK

TrEMBL top hitse value%identityAlignment
A0A6J1CNV0 double-stranded RNA-binding protein 4-like isoform X22.2e-149100Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
        IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ
        DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ

A0A6J1CPC5 double-stranded RNA-binding protein 4-like isoform X14.7e-136100Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
        IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
        DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK

A0A6J1J1D4 double-stranded RNA-binding protein 4-like isoform X29.2e-10076.65Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPP VLP A+  PS+A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT 
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
         EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP+YTT  H+GSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
        DGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QK
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK

A0A6J1J4E3 double-stranded RNA-binding protein 4-like isoform X19.2e-10076.65Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPP VLP A+  PS+A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT 
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
         EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP+YTT  H+GSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
        DGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QK
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK

A0A6J1J9P9 double-stranded RNA-binding protein 4-like isoform X39.2e-10076.65Show/hide
Query:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV
        MVE SG + A   QQ SFPPDSAPA VPA IPVE S   Q  +D RPP VLP A+  PS+A AP+SSP PSD TQ F+YK+ LHEY Q+SRIPLPVYQT 
Subjt:  MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTV

Query:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF
         EGS G+PKYRSTV+VDEVHYVSPNTFRNRR AE DAARIALEYISK+ KDDGF+LL EDLM CKSILSEYTVKM+LKRP+YTT  H+GSVPIFQSTLVF
Subjt:  IEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVF

Query:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK
        DGVVYTG++SRSKKEAEQLAARAAILSL  DAGNP+SQKTL +IIASKVRLHA +QK
Subjt:  DGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQK

SwissProt top hitse value%identityAlignment
O04492 Double-stranded RNA-binding protein 13.3e-2236.63Show/hide
Query:  SSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFC
        S+ + S  +  +++KS+L EYAQ+ ++P PVY+ V EG      ++STV++D V Y S   F NR+ AE  AA +AL  ++K ++    +     +   C
Subjt:  SSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFC

Query:  KSILSEYTVKMNLKRPLYTTNHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN
        K++L EY  KMN   PLY     +  G V  F  T+   G+ YTG  +R+KK+AE  A R A+L++  D  N
Subjt:  KSILSEYTVKMNLKRPLYTTNHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN

Q0DJA3 Double-stranded RNA-binding protein 37.4e-2232.7Show/hide
Query:  PSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISK
        P+ LP    N S  PAPI +         +++KS+L EYAQ++ +  P Y T  EG    P ++STV+++   Y S   F NR+ AE  AA +AL  I K
Subjt:  PSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISK

Query:  RTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIAS
            +  +   ++   CK++L EY  KMN   P Y        +  F  T+   G+ Y G  +R+KK+AE  AAR A+L++ G +    +  T   ++  
Subjt:  RTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIAS

Query:  KVRLHATLQKR
        K R+   ++KR
Subjt:  KVRLHATLQKR

Q0IQN6 Double-stranded RNA-binding protein 87.4e-2232.55Show/hide
Query:  PPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYIS
        PP+ LP    N S AP   ++ I  ++   +++KS+L EYAQ++ +  P Y T  EG    P ++STV+++   Y S   F NR+ AE  AA +AL  I 
Subjt:  PPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYIS

Query:  KRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIA
        K    +  +   ++   CK++L EY  KMN   P Y        +  F  T+   G+ Y G  +R+KK+AE  AAR A+L++ G +    +  T   ++ 
Subjt:  KRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIA

Query:  SKVRLHATLQKR
         K R+   ++KR
Subjt:  SKVRLHATLQKR

Q0IV63 Double-stranded RNA-binding protein 71.3e-2132.67Show/hide
Query:  PPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYIS
        PP+ LP    N S AP   ++ I  ++   +++KS+L EYAQ++ +  P Y T  EG    P ++STV+++   Y S   F NR+ AE  AA +AL  I 
Subjt:  PPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYIS

Query:  KRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIA
        K    +  +   ++   CK++L EY  KMN   P Y        +  F  T+   G+ Y G  +R+KK+AE  AAR A+L++ G +    +  T   ++ 
Subjt:  KRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIA

Query:  SK
         K
Subjt:  SK

Q6YW64 Double-stranded RNA-binding protein 41.4e-2536.54Show/hide
Query:  SVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKR
        +V   A      +PAP+  P P  +     YKS+L EY Q++   LP+Y T  +G     K++STV+VD   + S    R  + AE DAA++A + + +R
Subjt:  SVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKR

Query:  TK-----DDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTK
         +      D F L+ +D++F KSIL EYT K    +P Y+    +GSV  + S++ F G  YTG  +R+KK+AEQ AARAA+ SL+       +  ++ K
Subjt:  TK-----DDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGNPESQKTLTK

Query:  IIASKVRL
        I+ SK +L
Subjt:  IIASKVRL

Arabidopsis top hitse value%identityAlignment
AT1G09700.1 dsRNA-binding domain-like superfamily protein2.4e-2336.63Show/hide
Query:  SSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFC
        S+ + S  +  +++KS+L EYAQ+ ++P PVY+ V EG      ++STV++D V Y S   F NR+ AE  AA +AL  ++K ++    +     +   C
Subjt:  SSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQ-EDLMFC

Query:  KSILSEYTVKMNLKRPLYTTNHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN
        K++L EY  KMN   PLY     +  G V  F  T+   G+ YTG  +R+KK+AE  A R A+L++  D  N
Subjt:  KSILSEYTVKMNLKRPLYTTNHHD--GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSLIGDAGN

AT2G28380.1 dsRNA-binding protein 29.6e-1735.71Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFL--LLQEDLMFCKSILSEYTVKM
        +YK+QL E AQRS   LP Y  + EG    P++++TV  +   + SP      R AEH AA +AL  +S R         +L E  ++ K++L E   ++
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFL--LLQEDLMFCKSILSEYTVKM

Query:  NLKRPLYTTNHHD-GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL
            P YTT     G  P+F  T+   G+ +TG+ +++KK+AE+ AA AA  SL
Subjt:  NLKRPLYTTNHHD-GSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL

AT3G26932.1 dsRNA-binding protein 36.9e-1534.42Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKR--TKDDGFLLLQEDLMFCKSILSEYTVKM
        +YK+QL E AQRS   LP Y    EG    P+++++V  +   + SP      R AEH AA +AL  +S +  +K     +L E  ++ K++L E   + 
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKR--TKDDGFLLLQEDLMFCKSILSEYTVKM

Query:  NLKRPLYTT-NHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL
         L  P+YT+     G +P F  T+   G+ + G  +++KK+AE+ AA AA  SL
Subjt:  NLKRPLYTT-NHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL

AT3G26932.2 dsRNA-binding protein 36.9e-1534.42Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKR--TKDDGFLLLQEDLMFCKSILSEYTVKM
        +YK+QL E AQRS   LP Y    EG    P+++++V  +   + SP      R AEH AA +AL  +S +  +K     +L E  ++ K++L E   + 
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKR--TKDDGFLLLQEDLMFCKSILSEYTVKM

Query:  NLKRPLYTT-NHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL
         L  P+YT+     G +P F  T+   G+ + G  +++KK+AE+ AA AA  SL
Subjt:  NLKRPLYTT-NHHDGSVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL

AT5G41070.1 dsRNA-binding protein 52.6e-1432.68Show/hide
Query:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLL-LQEDLMFCKSILSEYTVKMN
        +YK+QL E AQRS   LP Y  + EG    P+++++V  +   + SP      R AEH AA ++L  +S R         + ++    K++L E   +  
Subjt:  IYKSQLHEYAQRSRIPLPVYQTVIEGSIGLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLL-LQEDLMFCKSILSEYTVKMN

Query:  LKRPLYTTNHHDG-SVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL
        L  P+YT+        P F  T+   G+ +TG  +++KK+AE+ AA AA  SL
Subjt:  LKRPLYTTNHHDG-SVPIFQSTLVFDGVVYTGNLSRSKKEAEQLAARAAILSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAAATTCCGGTGCAATTGTAGCACATGCTGCGCAACAACCTTCATTCCCACCGGACTCAGCTCCGGCTGCTGTTCCGGCCGCTATTCCGGTGGAAATC
TCTGGTGCTTCTCAGCCTGCAGCAGATGTTCGTCCTCCATCTGTTTTACCAGACGCAGTTCGGAACCCGAGTGCGGCTCCAGCGCCGATTTCATCTCCGATTCCC
TCCGATTCTACCCAGACCTTCATATACAAGAGTCAATTGCATGAGTACGCGCAAAGATCGAGGATCCCATTACCAGTTTATCAAACAGTTATTGAAGGATCTATA
GGTTTACCAAAATATAGGTCTACTGTGTTAGTTGATGAGGTACATTACGTGTCTCCAAATACGTTTCGTAATCGAAGGGGAGCTGAACATGATGCTGCTAGAATT
GCCCTTGAGTACATATCAAAAAGAACAAAGGACGATGGCTTTCTTCTTCTTCAGGAGGATTTGATGTTTTGTAAGTCCATTTTATCTGAATATACGGTCAAAATG
AACTTGAAAAGACCTCTTTACACAACAAATCATCACGACGGCTCAGTTCCAATTTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACCGGCAATCTTAGT
AGGAGCAAAAAAGAGGCCGAGCAATTGGCAGCACGTGCTGCTATACTATCACTTATTGGTGATGCAGGAAATCCCGAATCACAAAAAACCCTTACTAAAATTATT
GCTTCTAAAGTCAGACTCCATGCAACGTTGCAAAAGAGATTCCTCCCACAACATCTCATTTTCAACCTGAATTTAAACCAGAAGCATCACCCCTTTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAAATTCCGGTGCAATTGTAGCACATGCTGCGCAACAACCTTCATTCCCACCGGACTCAGCTCCGGCTGCTGTTCCGGCCGCTATTCCGGTGGAAATC
TCTGGTGCTTCTCAGCCTGCAGCAGATGTTCGTCCTCCATCTGTTTTACCAGACGCAGTTCGGAACCCGAGTGCGGCTCCAGCGCCGATTTCATCTCCGATTCCC
TCCGATTCTACCCAGACCTTCATATACAAGAGTCAATTGCATGAGTACGCGCAAAGATCGAGGATCCCATTACCAGTTTATCAAACAGTTATTGAAGGATCTATA
GGTTTACCAAAATATAGGTCTACTGTGTTAGTTGATGAGGTACATTACGTGTCTCCAAATACGTTTCGTAATCGAAGGGGAGCTGAACATGATGCTGCTAGAATT
GCCCTTGAGTACATATCAAAAAGAACAAAGGACGATGGCTTTCTTCTTCTTCAGGAGGATTTGATGTTTTGTAAGTCCATTTTATCTGAATATACGGTCAAAATG
AACTTGAAAAGACCTCTTTACACAACAAATCATCACGACGGCTCAGTTCCAATTTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACCGGCAATCTTAGT
AGGAGCAAAAAAGAGGCCGAGCAATTGGCAGCACGTGCTGCTATACTATCACTTATTGGTGATGCAGGAAATCCCGAATCACAAAAAACCCTTACTAAAATTATT
GCTTCTAAAGTCAGACTCCATGCAACGTTGCAAAAGAGATTCCTCCCACAACATCTCATTTTCAACCTGAATTTAAACCAGAAGCATCACCCCTTTCAGTGA
Protein sequenceShow/hide protein sequence
MVENSGAIVAHAAQQPSFPPDSAPAAVPAAIPVEISGASQPAADVRPPSVLPDAVRNPSAAPAPISSPIPSDSTQTFIYKSQLHEYAQRSRIPLPVYQTVIEGSI
GLPKYRSTVLVDEVHYVSPNTFRNRRGAEHDAARIALEYISKRTKDDGFLLLQEDLMFCKSILSEYTVKMNLKRPLYTTNHHDGSVPIFQSTLVFDGVVYTGNLS
RSKKEAEQLAARAAILSLIGDAGNPESQKTLTKIIASKVRLHATLQKRFLPQHLIFNLNLNQKHHPFQ