; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g36320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g36320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionHMG-Y-related protein A-like
Genome locationchr8:26928695..26940286
RNA-Seq ExpressionMoc08g36320
SyntenyMoc08g36320
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145857.1 HMG-Y-related protein A isoform X2 [Cucumis sativus]2.7e-7987.22Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
         +  +S PKPRGRPPKDPNAPP+PPKPV MKVSSGTGKPRGRPRK  +  S  APPAPSGRPRGRPPK KA LTEV VQQ
Subjt:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

XP_008456999.1 PREDICTED: HMG-Y-related protein A-like [Cucumis melo]2.4e-8087.78Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
         + A+SPPKPRGRPPKDPNAPP+PPKPV MKVSSGTGKPRGRPRK  +  +  APPAPSGRPRGRPPK KA LTEV VQQ
Subjt:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

XP_022143283.1 HMG-Y-related protein A-like [Momordica charantia]1.4e-9399.44Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
        SNVA SPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
Subjt:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

XP_022935331.1 HMG-Y-related protein A-like [Cucurbita moschata]7.0e-8087.43Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MA   VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK KVPLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNA---PPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
            LSPPKPRGRPPKDPNA   PP+PPKPV MKVSSGTGKPRGRPRK  RP +  APP PSGRPRGRPPK K PLTEV VQQ
Subjt:  SNVALSPPKPRGRPPKDPNA---PPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

XP_038878302.1 HMG-Y-related protein A-like [Benincasa hispida]3.5e-7986.67Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT  VNKPPSLPPYPEMIFRAIEALNS+NGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPK PLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
         +  LSPPKPRGRPPKDPNAPP+PPKPV MKVSSGTGK RGRPRK    T++ +PP PSGRPRGRPPK K  LTEV VQQ
Subjt:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

TrEMBL top hitse value%identityAlignment
A0A1S3C432 HMG-Y-related protein A-like1.2e-8087.78Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
         + A+SPPKPRGRPPKDPNAPP+PPKPV MKVSSGTGKPRGRPRK  +  +  APPAPSGRPRGRPPK KA LTEV VQQ
Subjt:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

A0A5D3DJY3 HMG-Y-related protein A-like1.2e-8087.78Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
         + A+SPPKPRGRPPKDPNAPP+PPKPV MKVSSGTGKPRGRPRK  +  +  APPAPSGRPRGRPPK KA LTEV VQQ
Subjt:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

A0A6J1CQC1 HMG-Y-related protein A-like7.0e-9499.44Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
        SNVA SPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
Subjt:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

A0A6J1F494 HMG-Y-related protein A-like3.4e-8087.43Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MA   VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK KVPLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNA---PPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
            LSPPKPRGRPPKDPNA   PP+PPKPV MKVSSGTGKPRGRPRK  RP +  APP PSGRPRGRPPK K PLTEV VQQ
Subjt:  SNVALSPPKPRGRPPKDPNA---PPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

A0A6J1J6G8 HMG-Y-related protein A-like3.4e-8087.43Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MA   VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK KVPLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNA---PPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ
            LSPPKPRGRPPKDPNA   PP+PPKPV MKVSSGTGKPRGRPRK  RP +  APP PSGRPRGRPPK K PLTEV VQQ
Subjt:  SNVALSPPKPRGRPPKDPNA---PPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAPLTEVGVQQ

SwissProt top hitse value%identityAlignment
Q00423 HMG-Y-related protein A2.1e-5565.56Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT  VNKP SLPPYPEMI + +EALN  NGSNKS ISKYIE+TYG LP   +++L  HLN MK SGEL F +NNYMK DP APP+RGRGRPPKPK PLP
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPA-PSGRPRGRPPKAKAPLTEVGVQ
            +SPP+PRGRPPKDPNAPP+ PK    K + G+G+PRGRP+K+ R  ++ AP A  SGRPRGRPPK K  LTEV V+
Subjt:  SNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPA-PSGRPRGRPPKAKAPLTEVGVQ

Q10370 HMG-Y-related protein B (Fragment)1.3e-4464.74Show/hide
Query:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPSNVALSPPKPRGRPPKDPNAPPQP
        ALN  +GSNKS ISKYIE+TYG LP    ++L  HLN MK SGEL F +NNYMK DP APP+RGRGRPPKPKVPLP    +SPP+PRGRPPKDPNAPP+ 
Subjt:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPSNVALSPPKPRGRPPKDPNAPPQP

Query:  PKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPS-GRPRGRPPKAKAPLTEVGVQ
        PK    K +  TG+PRGRP+K+AR  ++ +P A S GRPRGRPPK K  LTEV V+
Subjt:  PKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPS-GRPRGRPPKAKAPLTEVGVQ

Q43386 HMG-Y-related protein A9.3e-3552.81Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPSN--------
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G+L+  KNNYMK DP APP+RGRGRPPK K    S+        
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPSN--------

Query:  ---VALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSIT-APPAPSG------RPRGRPPKAK
           V+  PP+ RGRPPK P  P +PP+    KV +G+G+PRGRP K  R  S T A P P+       R RGRPPK K
Subjt:  ---VALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSIT-APPAPSG------RPRGRPPKAK

Q9FYS5 HMG-Y-related protein A5.6e-3250.27Show/hide
Query:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRD-PTAPPRRGRGRPPK---PK
        MAT    KP  +PPYPEMI  AIE L+  +GSNKS ISKYIE  YG+LP  H+SLLT HL  MK SGELVF KNNY +   P APP+RGRGRPPK   P 
Subjt:  MATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRD-PTAPPRRGRGRPPK---PK

Query:  VPLPS-NVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAP-----PAPSG-------RPRGRPPKAK
         P P+     S  + RGRPPK       P +    + ++G  KPRGRP K A+     +P     PAP+G       R RGRPPK +
Subjt:  VPLPS-NVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAP-----PAPSG-------RPRGRPPKAK

Q9SHL7 Exosome complex exonuclease RRP44 homolog A3.4e-2970.79Show/hide
Query:  LENPAIDDVVMLSVVLDEIKNKNLSIYNRVRALCSNPLRRFFVFSNKHHKDTYVKEMSGESKNDRNDRAIRVATQWYQKHLGGATRVLV
        LEN AID VV+LSVVLDE+KN+N S+YNR+R LCSNP R+F+VFSN  HKDTYV+ M  ES ND NDRAIRVAT WYQKHLG  ++VL+
Subjt:  LENPAIDDVVMLSVVLDEIKNKNLSIYNRVRALCSNPLRRFFVFSNKHHKDTYVKEMSGESKNDRNDRAIRVATQWYQKHLGGATRVLV

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A6.6e-3652.81Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPSN--------
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G+L+  KNNYMK DP APP+RGRGRPPK K    S+        
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPSN--------

Query:  ---VALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSIT-APPAPSG------RPRGRPPKAK
           V+  PP+ RGRPPK P  P +PP+    KV +G+G+PRGRP K  R  S T A P P+       R RGRPPK K
Subjt:  ---VALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSIT-APPAPSG------RPRGRPPKAK

AT1G48620.1 high mobility group A59.3e-1434.98Show/hide
Query:  TGGVNKPPSL--PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY-MKRDPTAPP--------------
        T  V   PS+  PPY +MI  AI ALN  +GS+K  IS+YIE  Y  +PT H +LLTHHL  +K SG LV  K +Y +   P  PP              
Subjt:  TGGVNKPPSL--PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY-MKRDPTAPP--------------

Query:  ----------------------RRGRGRPPKPKVPLPSNVALSPPK--------PRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAP
                              +RGRGRPPK K  +     L+  K        P  RP +    PPQ P    ++      +P GRPRK    TS T  
Subjt:  ----------------------RRGRGRPPKPKVPLPSNVALSPPK--------PRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAP

Query:  PAPS-------GRPRGRPPKAKA
        PA S        + RGRPP  +A
Subjt:  PAPS-------GRPRGRPPKAKA

AT2G17510.1 ribonuclease II family protein2.4e-3070.79Show/hide
Query:  LENPAIDDVVMLSVVLDEIKNKNLSIYNRVRALCSNPLRRFFVFSNKHHKDTYVKEMSGESKNDRNDRAIRVATQWYQKHLGGATRVLV
        LEN AID VV+LSVVLDE+KN+N S+YNR+R LCSNP R+F+VFSN  HKDTYV+ M  ES ND NDRAIRVAT WYQKHLG  ++VL+
Subjt:  LENPAIDDVVMLSVVLDEIKNKNLSIYNRVRALCSNPLRRFFVFSNKHHKDTYVKEMSGESKNDRNDRAIRVATQWYQKHLGGATRVLV

AT2G17510.2 ribonuclease II family protein2.4e-3070.79Show/hide
Query:  LENPAIDDVVMLSVVLDEIKNKNLSIYNRVRALCSNPLRRFFVFSNKHHKDTYVKEMSGESKNDRNDRAIRVATQWYQKHLGGATRVLV
        LEN AID VV+LSVVLDE+KN+N S+YNR+R LCSNP R+F+VFSN  HKDTYV+ M  ES ND NDRAIRVAT WYQKHLG  ++VL+
Subjt:  LENPAIDDVVMLSVVLDEIKNKNLSIYNRVRALCSNPLRRFFVFSNKHHKDTYVKEMSGESKNDRNDRAIRVATQWYQKHLGGATRVLV

AT3G18035.1 winged-helix DNA-binding transcription factor family protein1.7e-1234.13Show/hide
Query:  PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY---------------------------------MKR
        PPY EMI  AI ALN  +GS+K  IS+YIE  Y  L + H++LLTHHL  +K SG L   K +Y                                    
Subjt:  PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY---------------------------------MKR

Query:  DPTA------PPRRGRGRPPKPK-VPLPSNVALSPPKPRGRPPKDP---NAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSG------RPR
        DP A      P +RGRGRPPKPK    P  +   PP  + +    P       Q P PV   V+    +  GRPRK       TAP   +       + R
Subjt:  DPTA------PPRRGRGRPPKPK-VPLPSNVALSPPKPRGRPPKDP---NAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSG------RPR

Query:  GRPPKAKA
        GRPP  +A
Subjt:  GRPPKAKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCATAACAAGTCGTTTGTGAAAAAAACGAAGTCTGTGAAGGTGATGAAGCTTGAGAATCCGGCTATTGATGACGTGGTTATGCTATCAGTTGTGCTGGACGAGAT
TAAGAACAAGAACTTGTCTATTTACAATAGAGTTAGAGCTCTCTGCAGTAATCCACTGAGGAGATTCTTTGTCTTCTCCAACAAGCATCACAAGGATACATATGTTAAGG
AGATGAGTGGAGAAAGTAAAAATGATCGAAATGATAGAGCAATTCGTGTGGCTACTCAGTGGTATCAGAAACACCTTGGTGGTGCAACTCGTGTTCTAGTCAGACAGATT
TGGGGTTGGATTAATTCCAAGACTTCTACCACTAGGAGAGATATGCGTGGAGTTGTAAGAGCTGAAATGTTTGCTATGCTATACTTCAATGATCCAGAGAATAGCTTAAT
AGATGTTTTGGATTTGGCTGCATCTCAAATTTCAATGGCGACTGGAGGAGTTAATAAACCTCCATCACTCCCCCCTTACCCAGAGATGATATTTAGGGCTATTGAAGCAT
TGAATAGTGACAATGGCTCCAACAAATCCACGATATCAAAGTACATAGAATCAACTTATGGAAACTTGCCCACTGGGCACTCATCTCTGCTCACACACCATTTGAACATG
ATGAAAGCCAGTGGGGAACTTGTGTTTTGGAAGAACAACTACATGAAAAGGGACCCCACGGCACCTCCCCGGCGGGGGCGTGGCAGGCCTCCAAAACCAAAGGTGCCTCT
GCCGTCCAATGTGGCATTATCCCCACCAAAGCCCAGAGGCCGCCCACCTAAGGACCCCAATGCACCTCCACAGCCACCGAAGCCAGTGACGATGAAGGTATCTTCTGGGA
CTGGGAAACCAAGAGGACGACCGAGGAAATTGGCTCGGCCAACGTCCATCACAGCACCTCCAGCACCGAGCGGGAGGCCCAGAGGTCGGCCTCCCAAGGCGAAGGCTCCA
TTGACTGAAGTTGGCGTTCAACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCATAACAAGTCGTTTGTGAAAAAAACGAAGTCTGTGAAGGTGATGAAGCTTGAGAATCCGGCTATTGATGACGTGGTTATGCTATCAGTTGTGCTGGACGAGAT
TAAGAACAAGAACTTGTCTATTTACAATAGAGTTAGAGCTCTCTGCAGTAATCCACTGAGGAGATTCTTTGTCTTCTCCAACAAGCATCACAAGGATACATATGTTAAGG
AGATGAGTGGAGAAAGTAAAAATGATCGAAATGATAGAGCAATTCGTGTGGCTACTCAGTGGTATCAGAAACACCTTGGTGGTGCAACTCGTGTTCTAGTCAGACAGATT
TGGGGTTGGATTAATTCCAAGACTTCTACCACTAGGAGAGATATGCGTGGAGTTGTAAGAGCTGAAATGTTTGCTATGCTATACTTCAATGATCCAGAGAATAGCTTAAT
AGATGTTTTGGATTTGGCTGCATCTCAAATTTCAATGGCGACTGGAGGAGTTAATAAACCTCCATCACTCCCCCCTTACCCAGAGATGATATTTAGGGCTATTGAAGCAT
TGAATAGTGACAATGGCTCCAACAAATCCACGATATCAAAGTACATAGAATCAACTTATGGAAACTTGCCCACTGGGCACTCATCTCTGCTCACACACCATTTGAACATG
ATGAAAGCCAGTGGGGAACTTGTGTTTTGGAAGAACAACTACATGAAAAGGGACCCCACGGCACCTCCCCGGCGGGGGCGTGGCAGGCCTCCAAAACCAAAGGTGCCTCT
GCCGTCCAATGTGGCATTATCCCCACCAAAGCCCAGAGGCCGCCCACCTAAGGACCCCAATGCACCTCCACAGCCACCGAAGCCAGTGACGATGAAGGTATCTTCTGGGA
CTGGGAAACCAAGAGGACGACCGAGGAAATTGGCTCGGCCAACGTCCATCACAGCACCTCCAGCACCGAGCGGGAGGCCCAGAGGTCGGCCTCCCAAGGCGAAGGCTCCA
TTGACTGAAGTTGGCGTTCAACAGTAG
Protein sequenceShow/hide protein sequence
MLHNKSFVKKTKSVKVMKLENPAIDDVVMLSVVLDEIKNKNLSIYNRVRALCSNPLRRFFVFSNKHHKDTYVKEMSGESKNDRNDRAIRVATQWYQKHLGGATRVLVRQI
WGWINSKTSTTRRDMRGVVRAEMFAMLYFNDPENSLIDVLDLAASQISMATGGVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNM
MKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPSNVALSPPKPRGRPPKDPNAPPQPPKPVTMKVSSGTGKPRGRPRKLARPTSITAPPAPSGRPRGRPPKAKAP
LTEVGVQQ