CuGenDBv2

Gene ID	Moc08g36590
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	centromere protein F
Genome location	chr8:27211612..27212420
RNA-Seq Expression	Moc08g36590
Synteny	Moc08g36590
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581169.1 hypothetical protein SDJN03_21171, partial [Cucurbita argyrosperma subsp. sororia]

5.6e-76

91.11

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Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        +ASKPSK+E+EQDMEVSKSALLEKLEIKK+ELSSMEDTV+ LEKRWA+ QDKALKQP PVQR KMLDKQLHSL+EQLAVKQAQAEGLASDIHLKEMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNA SRRLQSSSSEANIARNRFGRSMSDKNFSDHLADS HKLPYRTSGR++SQQRLMLLRSAFVLYIL LHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

XP_022143365.1 uncharacterized protein PFB0145c [Momordica charantia]

1.1e-84

100

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Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

XP_022935341.1 uncharacterized protein PFB0145c [Cucurbita moschata]

7.2e-76

91.11

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Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        +ASKPSK+E+EQDMEVSKSALLEKLEIKK+ELSSMEDTVK LEKRWA+ QDKALKQP PVQR KMLDKQLHSL+EQLAVKQAQAEGLASDIHLKEMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNA SRRLQSSSSEANIARNRFGRSMSDKNFSDHLADS HKLPYRT GR++SQQRLMLLRSAFVLYIL LHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

XP_022983408.1 rab11 family-interacting protein 3 [Cucurbita maxima]

1.2e-75

91.11

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Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        +ASKPSK+E+EQDMEVSKSALLEKLEIKK+ELSSMEDTVK LEKRWAE QDKALKQP PVQR KMLDKQLHSL+EQLAVKQAQAEGLASDIHLKEMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNA SRRLQSSSSEANIARNRFGRSMSDKNF DHLADS HKLPYRT GR+ESQQ+LMLLRSAFVLYIL LHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

XP_023528196.1 uncharacterized protein PFB0145c [Cucurbita pepo subsp. pepo]

2.5e-76

91.67

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Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        +ASKPSK+E+EQDMEVSKSALLEKLEIKK+ELSSMEDTVK LEKRWAE QDKALKQP PVQR KMLDKQLHSL+EQLAVKQAQAEGLASDIHLKEMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNA SRRLQSSSSEANIARNRFGRSMSDKNFSDHLADS HKLPYRT GR++SQQRLMLLRSAFVLYIL LHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CFI4 centromere protein F

1.5e-74

87.78

Show/hide

Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        + SKPSK+E+EQDME+SKSALLEKL+IKK+ELSSMEDT+K LEK+WAE QDKALKQP PVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNA SRRLQSSSSEANIARNRFGRSMSDKNF DHLA+S HKLPYRT GR+E+QQRLML RSAFV+YIL LHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

A0A5A7T417 Centromere protein F

1.2e-73

86.67

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Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        + SKPSK+E+EQDME+SKSALLEKL+IKK+ELSSMEDT+K LEK+WAE QDKALKQP PVQREKMLDKQLHSL+EQLAVKQAQAEGLASDIHL EMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNA SRRLQSSSSEANIARNRFGRSMSDKNF DHLA+S HKLPYRT GR+E+QQRLML RSAFV+YIL LHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

A0A6J1CNL8 uncharacterized protein PFB0145c

5.4e-85

100

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Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

A0A6J1F4A5 uncharacterized protein PFB0145c

3.5e-76

91.11

Show/hide

Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        +ASKPSK+E+EQDMEVSKSALLEKLEIKK+ELSSMEDTVK LEKRWA+ QDKALKQP PVQR KMLDKQLHSL+EQLAVKQAQAEGLASDIHLKEMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNA SRRLQSSSSEANIARNRFGRSMSDKNFSDHLADS HKLPYRT GR++SQQRLMLLRSAFVLYIL LHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

A0A6J1J7P1 rab11 family-interacting protein 3

6.0e-76

91.11

Show/hide

Query:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK
        +ASKPSK+E+EQDMEVSKSALLEKLEIKK+ELSSMEDTVK LEKRWAE QDKALKQP PVQR KMLDKQLHSL+EQLAVKQAQAEGLASDIHLKEMELEK
Subjt:  MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEK

Query:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
        LNA SRRLQSSSSEANIARNRFGRSMSDKNF DHLADS HKLPYRT GR+ESQQ+LMLLRSAFVLYIL LHILVFIKISF
Subjt:  LNALSRRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G15880.1 unknown protein

1.2e-44

61.54

Show/hide

Query:  DMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEKLNALSRRLQSSS
        D E  KS +LEKLE KK ++S ME+ V+ LE+ WA  Q++ALKQP P QREK LDKQLHSLIEQLA KQAQAEG+  +IHL EMELE+LN L RR +S +
Subjt:  DMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEKLNALSRRLQSSS

Query:  SEANIARNRFGRSMSDKNF-SDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF
         E N ARNRF R+ SD+ F SDH  D    LPY ++ R  +Q RLM LRSAFV+YIL L +LVFI+ISF
Subjt:  SEANIARNRFGRSMSDKNF-SDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

Sequences

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CDS sequence

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ATGGCATCTAAACCTTCTAAAATTGAATCAGAACAAGATATGGAAGTATCAAAGTCTGCCTTGCTAGAAAAGTTAGAGATCAAGAAAAAAGAACTGAGTTCAATG
GAAGATACAGTTAAACATTTAGAAAAAAGGTGGGCAGAATTTCAGGATAAAGCTCTGAAACAGCCATTACCAGTTCAGAGAGAGAAAATGTTGGACAAACAGCTC
CATAGCCTCATCGAGCAACTAGCTGTGAAACAGGCACAAGCTGAAGGTTTGGCTAGTGACATCCATCTGAAGGAGATGGAACTAGAAAAACTAAATGCATTATCA
AGGAGGCTTCAAAGTAGCAGCAGTGAGGCTAACATCGCACGTAATCGTTTCGGAAGAAGCATGTCTGACAAGAATTTTTCAGACCACTTAGCTGACTCACTCCAC
AAACTTCCTTACCGCACCAGTGGTCGGACTGAGAGCCAGCAGAGGCTGATGCTACTCAGATCTGCTTTCGTGCTCTACATCTTAGGTCTGCATATCTTGGTTTTC
ATAAAAATTTCATTCTGA

mRNA sequence

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Protein sequence

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MASKPSKIESEQDMEVSKSALLEKLEIKKKELSSMEDTVKHLEKRWAEFQDKALKQPLPVQREKMLDKQLHSLIEQLAVKQAQAEGLASDIHLKEMELEKLNALS
RRLQSSSSEANIARNRFGRSMSDKNFSDHLADSLHKLPYRTSGRTESQQRLMLLRSAFVLYILGLHILVFIKISF

Moc08g36590 (gene) of Bitter gourd (OHB3-1) v2 genome