; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc08g38510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g38510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiontranscription factor MYC4-like
Genome locationchr8:28885140..28886788
RNA-Seq ExpressionMoc08g38510
SyntenyMoc08g38510
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR045084 - Transcription factor AIB/MYC-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441948.1 PREDICTED: transcription factor MYC3-like [Cucumis melo]1.9e-1343.2Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME
        F+SLR ++PNVS  D  A++L  AVSYIN+L  KI ++ES++              EEE +S+   E  + ++V+I+GGD+AV+RVE++ + YA A++ME
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME

Query:  ALRDLELKLHHATISNLNNVTCQRL
        ALRDL LK+ H ++ N  ++T Q L
Subjt:  ALRDLELKLHHATISNLNNVTCQRL

XP_022144464.1 transcription factor bHLH14-like [Momordica charantia]1.4e-2155.3Show/hide
Query:  DALRRR---GRPFSSLRALLPNVSEADNA-AAVLFHAVSYINDLRTKIQQLESQLP-----NEEEVTS--KGVEVEVVVEVEIVGGDKAVVRVETQGVRY
        +A RRR      FSSLR+LLPN S +DN+ AAVL  AVSYIN+L+ K++ LES L       E+E TS  K   +EV VEV+I+G D+AVVR++T+ + Y
Subjt:  DALRRR---GRPFSSLRALLPNVSEADNA-AAVLFHAVSYINDLRTKIQQLESQLP-----NEEEVTS--KGVEVEVVVEVEIVGGDKAVVRVETQGVRY

Query:  AEARVMEALRDLELKLHHATISNLNNVTCQRL
        A AR+MEALRDLELK+HHAT+ N N++T Q L
Subjt:  AEARVMEALRDLELKLHHATISNLNNVTCQRL

XP_022144465.1 transcription factor MYC4-like [Momordica charantia]6.8e-64100Show/hide
Query:  MEKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVR
        MEKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVR
Subjt:  MEKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVR

Query:  YAEARVMEALRDLELKLHHATISNLNNVTCQRL
        YAEARVMEALRDLELKLHHATISNLNNVTCQRL
Subjt:  YAEARVMEALRDLELKLHHATISNLNNVTCQRL

XP_031736394.1 transcription factor bHLH14-like [Cucumis sativus]1.5e-1543.31Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGV---------------EVEVVVEVEIVGGDKAVVRVETQGVRYAEARV
        F+SLR+++PNVS  D  A++L  AVSYIN+L  KI ++ES++  E++    GV               E  + ++V+I+GGD+AV+RVE++ + YA A++
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGV---------------EVEVVVEVEIVGGDKAVVRVETQGVRYAEARV

Query:  MEALRDLELKLHHATISNLNNVTCQRL
        MEALRDLELK+ H ++ NL ++T Q L
Subjt:  MEALRDLELKLHHATISNLNNVTCQRL

XP_038890552.1 transcription factor MYC3-like [Benincasa hispida]1.6e-1747.5Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQL-------PNEEEVTSKGVEVEVV-VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL
        F+SLR+++P+VS  D  A++L +A+SYIN+L+ KI ++ES++         EEE +S+    +V+ ++V+I+GGD+AV+RV+T+ V YA A++MEALRDL
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQL-------PNEEEVTSKGVEVEVV-VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL

Query:  ELKLHHATISNLNNVTCQRL
        ELK+ HA++SNL ++T Q L
Subjt:  ELKLHHATISNLNNVTCQRL

TrEMBL top hitse value%identityAlignment
A0A0A0LKN8 BHLH domain-containing protein7.5e-1643.31Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGV---------------EVEVVVEVEIVGGDKAVVRVETQGVRYAEARV
        F+SLR+++PNVS  D  A++L  AVSYIN+L  KI ++ES++  E++    GV               E  + ++V+I+GGD+AV+RVE++ + YA A++
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGV---------------EVEVVVEVEIVGGDKAVVRVETQGVRYAEARV

Query:  MEALRDLELKLHHATISNLNNVTCQRL
        MEALRDLELK+ H ++ NL ++T Q L
Subjt:  MEALRDLELKLHHATISNLNNVTCQRL

A0A1S3B4K7 transcription factor MYC3-like9.1e-1443.2Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME
        F+SLR ++PNVS  D  A++L  AVSYIN+L  KI ++ES++              EEE +S+   E  + ++V+I+GGD+AV+RVE++ + YA A++ME
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME

Query:  ALRDLELKLHHATISNLNNVTCQRL
        ALRDL LK+ H ++ N  ++T Q L
Subjt:  ALRDLELKLHHATISNLNNVTCQRL

A0A5A7V6X0 Transcription factor MYC3-like9.1e-1443.2Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME
        F+SLR ++PNVS  D  A++L  AVSYIN+L  KI ++ES++              EEE +S+   E  + ++V+I+GGD+AV+RVE++ + YA A++ME
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME

Query:  ALRDLELKLHHATISNLNNVTCQRL
        ALRDL LK+ H ++ N  ++T Q L
Subjt:  ALRDLELKLHHATISNLNNVTCQRL

A0A6J1CRP5 transcription factor MYC4-like3.3e-64100Show/hide
Query:  MEKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVR
        MEKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVR
Subjt:  MEKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVR

Query:  YAEARVMEALRDLELKLHHATISNLNNVTCQRL
        YAEARVMEALRDLELKLHHATISNLNNVTCQRL
Subjt:  YAEARVMEALRDLELKLHHATISNLNNVTCQRL

A0A6J1CSD3 transcription factor bHLH14-like7.0e-2255.3Show/hide
Query:  DALRRR---GRPFSSLRALLPNVSEADNA-AAVLFHAVSYINDLRTKIQQLESQLP-----NEEEVTS--KGVEVEVVVEVEIVGGDKAVVRVETQGVRY
        +A RRR      FSSLR+LLPN S +DN+ AAVL  AVSYIN+L+ K++ LES L       E+E TS  K   +EV VEV+I+G D+AVVR++T+ + Y
Subjt:  DALRRR---GRPFSSLRALLPNVSEADNA-AAVLFHAVSYINDLRTKIQQLESQLP-----NEEEVTS--KGVEVEVVVEVEIVGGDKAVVRVETQGVRY

Query:  AEARVMEALRDLELKLHHATISNLNNVTCQRL
        A AR+MEALRDLELK+HHAT+ N N++T Q L
Subjt:  AEARVMEALRDLELKLHHATISNLNNVTCQRL

SwissProt top hitse value%identityAlignment
A0A060KY90 Transcription factor MYC12.0e-1030.54Show/hide
Query:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQ-------QLESQLP-NEEEVTSKGVE--------------VEVV
        E+P    +       +  + F +LRA++PNVS+ D  A++L  A++YIN+L++K+Q       +L SQ+    +E+T+KG                V++ 
Subjt:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQ-------QLESQLP-NEEEVTSKGVE--------------VEVV

Query:  VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLRQRQIATGTMLKA
        ++V+++G D A++R++     +  AR+M AL+DL+L +HHA++S +N++  Q   Q  +  G+ L A
Subjt:  VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLRQRQIATGTMLKA

A0A3Q7HRZ6 Transcription factor MYC21.7e-0930.77Show/hide
Query:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQL----------------------PNEEEVTSK---GVEV
        E+P    +       +  + F +LRA++PNVS+ D  A++L  A+SYIN+L++K+Q  ES                        PN++   S    G  V
Subjt:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQL----------------------PNEEEVTSK---GVEV

Query:  EVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR
        +V ++V+I+G D A++R++     +  AR+M AL +L+L +HHA++S +N++  Q+
Subjt:  EVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR

O49687 Transcription factor MYC41.3e-0930.72Show/hide
Query:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNEEEVTSK-------------------GVEVEVV
        E+P    +       +  + F SLRA++PNVS+ D  A++L  A+SYI++L++K+Q+ ES   +L  + +V +K                    V +E+ 
Subjt:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNEEEVTSK-------------------GVEVEVV

Query:  VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR
        V+V+I+G D A++R++     +  A+ MEAL++L+L+++HA++S +N++  Q+
Subjt:  VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR

Q9FIP9 Transcription factor MYC33.8e-0930Show/hide
Query:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSK-----------------------------
        E+P    +       +  + F SLRA++PNVS+ D  A++L  A+SYIN+L++K+QQ ES   ++EE+  K                             
Subjt:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSK-----------------------------

Query:  GVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR
           +E+ ++V+I+G D  ++RV+     +  AR MEAL++L+L+++HA++S +N++  Q+
Subjt:  GVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR

Q9LUK7 Transcription factor bHLH282.9e-0934.35Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLE--------------------SQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRY
        F +LRA++PNVS+ D   ++L  AV YIN+L++K + +E                    + +P+  +   K  E+ + +EV+I+  D A+VRVE++   +
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLE--------------------SQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRY

Query:  AEARVMEALRDLELKLHHATISNLNNVTCQR
          AR+M AL DLEL+++HA+IS +N++  Q+
Subjt:  AEARVMEALRDLELKLHHATISNLNNVTCQR

Arabidopsis top hitse value%identityAlignment
AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein3.5e-1033.12Show/hide
Query:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNE-EEV-------------------TSKGVEVEV
        E+P    +       +  + F +LRA++PNVS+ D  A++L  A++YIN+L++K+ + ES   Q+ N+ EEV                    S    V +
Subjt:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNE-EEV-------------------TSKGVEVEV

Query:  VVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR
         +EV+I+G D A++RVE+    +  AR+M AL DLEL+++HA++S +N++  Q+
Subjt:  VVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR

AT4G00870.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.1e-0834.07Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQ-----------LPNEEEVTS-KGVEVEV-------------VVEVEIVGGDKAVVRVET
        F +LRA++P VS  D  A++L  AVSYI  L++KI  LE++           L N    TS   VE +V              V+V+IV G++A++RV+T
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQ-----------LPNEEEVTS-KGVEVEV-------------VVEVEIVGGDKAVVRVET

Query:  QGVRYAEARVMEALRDLELKLHHATISNLNNVTCQ
        + V +  + +M AL +++ ++ HA  S L+ V  Q
Subjt:  QGVRYAEARVMEALRDLELKLHHATISNLNNVTCQ

AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein9.3e-1130.72Show/hide
Query:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNEEEVTSK-------------------GVEVEVV
        E+P    +       +  + F SLRA++PNVS+ D  A++L  A+SYI++L++K+Q+ ES   +L  + +V +K                    V +E+ 
Subjt:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNEEEVTSK-------------------GVEVEVV

Query:  VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR
        V+V+I+G D A++R++     +  A+ MEAL++L+L+++HA++S +N++  Q+
Subjt:  VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR

AT5G46760.1 Basic helix-loop-helix (bHLH) DNA-binding family protein2.7e-1030Show/hide
Query:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSK-----------------------------
        E+P    +       +  + F SLRA++PNVS+ D  A++L  A+SYIN+L++K+QQ ES   ++EE+  K                             
Subjt:  EKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSK-----------------------------

Query:  GVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR
           +E+ ++V+I+G D  ++RV+     +  AR MEAL++L+L+++HA++S +N++  Q+
Subjt:  GVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQR

AT5G46830.1 NACL-inducible gene 12.1e-1034.35Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLE--------------------SQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRY
        F +LRA++PNVS+ D   ++L  AV YIN+L++K + +E                    + +P+  +   K  E+ + +EV+I+  D A+VRVE++   +
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLE--------------------SQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRY

Query:  AEARVMEALRDLELKLHHATISNLNNVTCQR
          AR+M AL DLEL+++HA+IS +N++  Q+
Subjt:  AEARVMEALRDLELKLHHATISNLNNVTCQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAACCAGCCGGGTGGAAAAAAGGAGGCTATGATGCGCTCCGCCGTCGCGGCCGCCCATTCAGCTCCCTCCGTGCCCTACTCCCAAACGTCTCCGAAGCGGACAA
TGCAGCTGCAGTTCTTTTCCACGCTGTCTCATACATCAACGACCTCCGAACGAAGATCCAGCAATTGGAGTCTCAACTTCCGAACGAGGAAGAAGTGACGTCCAAAGGAG
TGGAAGTAGAAGTGGTGGTAGAAGTGGAGATCGTGGGAGGAGATAAGGCAGTTGTTAGAGTTGAGACCCAGGGCGTGAGGTATGCAGAAGCTAGGGTCATGGAGGCCCTT
AGGGACTTGGAGTTGAAGCTTCACCATGCCACAATCTCAAACTTGAACAATGTCACATGCCAACGTCTAAGGCAACGACAGATTGCCACAGGAACTATGCTGAAGGCTGG
CAGCGACGGGAGAGGGAGCGGTGAAAGCCATTGGCGACGGGATCTGGAGCGGAGAAGGTCGGAGACGACGGGATCTGGAGCGGCGAAGGCTGGAGGCGACAGGAGCGGGA
GTGGCGAAGTCCGAGGAAAACGAGAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAACCAGCCGGGTGGAAAAAAGGAGGCTATGATGCGCTCCGCCGTCGCGGCCGCCCATTCAGCTCCCTCCGTGCCCTACTCCCAAACGTCTCCGAAGCGGACAA
TGCAGCTGCAGTTCTTTTCCACGCTGTCTCATACATCAACGACCTCCGAACGAAGATCCAGCAATTGGAGTCTCAACTTCCGAACGAGGAAGAAGTGACGTCCAAAGGAG
TGGAAGTAGAAGTGGTGGTAGAAGTGGAGATCGTGGGAGGAGATAAGGCAGTTGTTAGAGTTGAGACCCAGGGCGTGAGGTATGCAGAAGCTAGGGTCATGGAGGCCCTT
AGGGACTTGGAGTTGAAGCTTCACCATGCCACAATCTCAAACTTGAACAATGTCACATGCCAACGTCTAAGGCAACGACAGATTGCCACAGGAACTATGCTGAAGGCTGG
CAGCGACGGGAGAGGGAGCGGTGAAAGCCATTGGCGACGGGATCTGGAGCGGAGAAGGTCGGAGACGACGGGATCTGGAGCGGCGAAGGCTGGAGGCGACAGGAGCGGGA
GTGGCGAAGTCCGAGGAAAACGAGAATGGTGA
Protein sequenceShow/hide protein sequence
MEKPAGWKKGGYDALRRRGRPFSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEAL
RDLELKLHHATISNLNNVTCQRLRQRQIATGTMLKAGSDGRGSGESHWRRDLERRRSETTGSGAAKAGGDRSGSGEVRGKREW