CuGenDBv2

Gene ID	Moc08g39860
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	40S ribosomal protein S8
Genome location	chr8:30494980..30496299
RNA-Seq Expression	Moc08g39860
Synteny	Moc08g39860
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001047 - Ribosomal protein S8e IPR018283 - Ribosomal protein S8e, conserved site IPR022309 - Ribosomal protein S8e/ribosomal biogenesis NSA2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004149800.1 40S ribosomal protein S8 [Cucumis sativus]

1.4e-56

90.55

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAV+R+TRILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        A+VQVDAAPFKQWY+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

XP_008466734.1 PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo]

3.7e-57

92.13

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Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+TRILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

XP_022153390.1 40S ribosomal protein S8-like [Momordica charantia]

3.4e-58

89.78

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Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRKPQHLRRRKRK
        AIVQVDAAPFKQWYVQHYG +  GR+K      +K +
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRKPQHLRRRKRK

XP_022929761.1 40S ribosomal protein S8-like [Cucurbita moschata]

1.8e-56

90.55

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Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR++RILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

XP_038884004.1 40S ribosomal protein S8-2 [Benincasa hispida]

3.7e-57

92.13

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Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+TRILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFT0 40S ribosomal protein S8

6.8e-57

90.55

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAV+R+TRILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        A+VQVDAAPFKQWY+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

A0A1S3CRZ5 40S ribosomal protein S8

1.8e-57

92.13

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+TRILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

A0A5D3CAQ0 40S ribosomal protein S8

1.8e-57

92.13

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR+TRILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

A0A6J1DGP6 40S ribosomal protein S8

1.6e-58

89.78

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRKPQHLRRRKRK
        AIVQVDAAPFKQWYVQHYG +  GR+K      +K +
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRKPQHLRRRKRK

A0A6J1K537 40S ribosomal protein S8

8.9e-57

90.55

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKS+RRIRVRGGNVKWRAFRLD GNYSWGSEAVTR++RILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

SwissProt top hits

e value

%identity

Alignment

O81361 40S ribosomal protein S8

5.9e-58

88.98

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GN+SWGSEAVTR+TR+LDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

P49199 40S ribosomal protein S8

2.9e-57

88.19

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Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K+VRR+RVRGGNVKWRA RLD GNYSWGSEAVTR+TRILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+ HYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

Q08069 40S ribosomal protein S8

2.9e-57

88.19

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K+VRR+RVRGGNVKWRA RLD GNYSWGSEAVTR+TRILDVVYNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+ HYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

Q93VG5 40S ribosomal protein S8-1

2.8e-55

85.04

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Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GNYSWGSEA TR+TR+LDVVYNASNNELVRT++LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+ HYG  L GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

Q9FIF3 40S ribosomal protein S8-2

1.4e-54

85.83

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GN+SWGSEAVTR+TRILDV YNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQ Y+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

Arabidopsis top hits

e value

%identity

Alignment

AT5G20290.1 Ribosomal protein S8e family protein

2.0e-56

85.04

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GNYSWGSEA TR+TR+LDVVYNASNNELVRT++LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQWY+ HYG  L GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

AT5G59240.1 Ribosomal protein S8e family protein

9.7e-56

85.83

Show/hide

Query:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS
        MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K+VRRIRVRGGNVKWRA RLD GN+SWGSEAVTR+TRILDV YNASNNELVRTQ+LVKS
Subjt:  MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKS

Query:  AIVQVDAAPFKQWYVQHYGWILDGRRK
        AIVQVDAAPFKQ Y+QHYG +  GR+K
Subjt:  AIVQVDAAPFKQWYVQHYGWILDGRRK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTATTTCTCGTGACTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCCTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCTGCCAAC
ACTAAGTTGTCCAGCGACAAGTCAGTCAGGAGGATTAGAGTTCGTGGGGGTAATGTGAAATGGCGTGCTTTTAGGCTTGATCAAGGAAACTACTCTTGGGGTAGT
GAGGCTGTGACTAGAAGGACCCGTATTCTTGATGTGGTGTACAATGCATCTAACAACGAGCTCGTCCGTACTCAATCTCTGGTGAAGAGTGCCATTGTTCAGGTT
GATGCAGCACCATTTAAGCAGTGGTATGTTCAGCATTATGGGTGGATATTGGACGGAAGAAGAAAACCACAGCATCTGCGAAGAAGGAAGAGGAAGGTGATGAGG
AGGAGAAGAAGAGTAACCATGTCCAGCGCAAACTAG

mRNA sequence

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Protein sequence

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MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSVRRIRVRGGNVKWRAFRLDQGNYSWGSEAVTRRTRILDVVYNASNNELVRTQSLVKSAIVQV
DAAPFKQWYVQHYGWILDGRRKPQHLRRRKRKVMRRRRRVTMSSAN

Moc08g39860 (gene) of Bitter gourd (OHB3-1) v2 genome