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Moc08g39880 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g39880
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionBEST Arabidopsis thaliana protein match is: s in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Genome locationchr8:30507072..30509458
RNA-Seq ExpressionMoc08g39880
SyntenyMoc08g39880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586081.1 Transcription initiation factor TFIID subunit 4b, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3576.77Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR
        MD  FHWD K+KVISRTSS+GCSSRSIYYCGT EGVPFKWETQPGTPKDPPPQ+MLPPL+PPPAVLSLGLPKPCIE+P  RPR  + LR    W   K+
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR

KAG7020905.1 hypothetical protein SDJN02_17593, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3576.77Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR
        MD  FHWD K+KVISRTSS+GCSSRSIYYCGT EGVPFKWETQPGTPKDPPPQ+MLPPL+PPPAVLSLGLPKPCIE+P  RPR  + LR    W   K+
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR

KAG7020906.1 hypothetical protein SDJN02_17594, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3576.77Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR
        MD  FHWD K+KVISRTSS+GCSSRSIYYCGT EGVPFKWETQPGTPKDPPPQ+MLPPL+PPPAVLSLGLPKPCIE+P  RPR  + LR    W   K+
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR

XP_022153305.1 uncharacterized protein LOC111020830 [Momordica charantia]1.0e-43100Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLR
        MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLR
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLR

XP_022938321.1 putative protein TPRXL [Cucurbita moschata]1.8e-3576.77Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR
        MD  FHWD K+KVISRTSS+GCSSRSIYYCGT EGVPFKWETQPGTPKDPPPQ+MLPPL+PPPAVLSLGLPKPCIE+P  RPR  + LR    W   K+
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR

TrEMBL top hitse value%identityAlignment
A0A5D3BQA0 Putative OSBP(Oxysterol binding protein)-related protein 4B4.6e-2976.09Show/hide
Query:  MDGK-FHWDTKSKVISRTSSVGCSSRSIYYCGTA-EGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKP-CIERPNPRPRLRMSLR
        M+G+ FHWD K+KVISRTSS+GCSS SIYY GTA +GVPFKWETQPGTPKDPPPQ++LPPLSPPPAVLSLG+PKP CI++P  R   RM LR
Subjt:  MDGK-FHWDTKSKVISRTSSVGCSSRSIYYCGTA-EGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKP-CIERPNPRPRLRMSLR

A0A6J1DGF8 uncharacterized protein LOC1110208305.1e-44100Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLR
        MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLR
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLR

A0A6J1ENL5 uncharacterized protein LOC1114361415.6e-3581.82Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSL
        MDG FHWD KSKVI+RTSS+GCSSRS YYCG AEGVPFKWETQPGTPKDPPPQ++LPPLSPPPAV+SLGLP PCIE+P  RPR  M L
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSL

A0A6J1FCU1 Uncharacterized protein8.7e-3676.77Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR
        MD  FHWD K+KVISRTSS+GCSSRSIYYCGT EGVPFKWETQPGTPKDPPPQ+MLPPL+PPPAVLSLGLPKPCIE+P  RPR  + LR    W   K+
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKR

A0A6J1K9Q8 uncharacterized protein LOC1114923751.1e-3583.15Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLR
        MDG FHWD KSKVI+RTSS+GCSSRS YYCG AEGVPFKWETQPGTPKDPPPQ++LPPLSPPPAVLSLGLP PCIE+P  RPR  M LR
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40475.1 unknown protein7.1e-0654.24Show/hide
Query:  SKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQE--MLPPLSPPPAVLS
        SK+I + SS   SS  IYY G A  VPF WET+PGTPK     E   LPPL+PPP+  S
Subjt:  SKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQE--MLPPLSPPPAVLS

AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)7.8e-1358.82Show/hide
Query:  ISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPR
        ISR SSVG      Y     EGVPF+WE QPGTP +  P+E++PPLSPPPA+LSLGLPKP I    P+
Subjt:  ISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPR

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B7.8e-1358.82Show/hide
Query:  ISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPR
        ISR SSVG      Y     EGVPF+WE QPGTP +  P+E++PPLSPPPA+LSLGLPKP I    P+
Subjt:  ISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPR

AT5G01790.1 unknown protein9.2e-0650Show/hide
Query:  SRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQ-EMLPPLSPPPAVLS
        S  S+   S R  YY G A  VPF+WE+ PGTPK P  +   LPPL+PPP+  S
Subjt:  SRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQ-EMLPPLSPPPAVLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAAAATTTCATTGGGATACAAAGAGCAAAGTGATATCAAGAACCTCCTCAGTTGGCTGTTCTTCTCGCAGCATTTATTACTGTGGAACAGCTGAAGGA
GTCCCTTTCAAATGGGAAACACAGCCAGGAACTCCCAAGGATCCTCCCCCTCAAGAAATGCTTCCCCCTCTCAGCCCTCCGCCCGCCGTCCTCAGCCTCGGGTTA
CCGAAACCCTGCATCGAACGCCCGAATCCCCGACCCCGACTCCGAATGAGCCTTAGGCCGTCCGATTTGTGGAACGCAGGGAAGCGTCTCGACACTGCCTCCGCC
ACCGAGAAAGCAGATTTGTTGTTGTCTAAGGTACTTTTCAACTCGTTATTTACTAAGCAATTTTTAGAAGTCCCATCAGGGAAAGCAGGTTTGCCTGTTAGCAAG
GTAAGGTGGCTCAGGTTGATTGCACATATAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAAAATTTCATTGGGATACAAAGAGCAAAGTGATATCAAGAACCTCCTCAGTTGGCTGTTCTTCTCGCAGCATTTATTACTGTGGAACAGCTGAAGGA
GTCCCTTTCAAATGGGAAACACAGCCAGGAACTCCCAAGGATCCTCCCCCTCAAGAAATGCTTCCCCCTCTCAGCCCTCCGCCCGCCGTCCTCAGCCTCGGGTTA
CCGAAACCCTGCATCGAACGCCCGAATCCCCGACCCCGACTCCGAATGAGCCTTAGGCCGTCCGATTTGTGGAACGCAGGGAAGCGTCTCGACACTGCCTCCGCC
ACCGAGAAAGCAGATTTGTTGTTGTCTAAGGTACTTTTCAACTCGTTATTTACTAAGCAATTTTTAGAAGTCCCATCAGGGAAAGCAGGTTTGCCTGTTAGCAAG
GTAAGGTGGCTCAGGTTGATTGCACATATAGCTTAA
Protein sequenceShow/hide protein sequence
MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLSPPPAVLSLGLPKPCIERPNPRPRLRMSLRPSDLWNAGKRLDTASA
TEKADLLLSKVLFNSLFTKQFLEVPSGKAGLPVSKVRWLRLIAHIA