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Moc08g40330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g40330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposon protein
Genome locationchr8:30911682..30912581
RNA-Seq ExpressionMoc08g40330
SyntenyMoc08g40330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-0643.84Show/hide
Query:  MIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP
        M+E++ +A  F   QL+ I  WP+EK   E   R EV+ QL+ IP L  +   KL+ ILF +V+ I GFLS+P
Subjt:  MIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP

KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.5e-0745.83Show/hide
Query:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP
        +E++++A+ F   QL+ IA WP+EK   E   R EV+ QL+ IP+L  R   KL+ ILF +V+ I GFLS+P
Subjt:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP

KAA0066604.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-0645.21Show/hide
Query:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPL
        +E++++AM F   QL+ IA WP+EK   E   R EV+ QL+ I +L  R   KL+ ILF +V+ I GFLS+P+
Subjt:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPL

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.4e-0541.67Show/hide
Query:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP
        +E++++ M F   QL+ IA WP+EK   E   R +V+ QL+ IP L  +   KL+ ILF +++ I GFLS+P
Subjt:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP

XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]1.7e-1150Show/hide
Query:  MIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRE
        M+++++T MR QT  LEK+A WP++K +++ ARRK V DQLKQIP+L+    V+LV IL TNV+K   FL VP+ +++
Subjt:  MIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRE

TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI17.3e-0845.83Show/hide
Query:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP
        +E++++A+ F   QL+ IA WP+EK   E   R EV+ QL+ IP+L  R   KL+ ILF +V+ I GFLS+P
Subjt:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP

A0A5A7V8C5 Putative nuclease HARBI16.8e-0644.44Show/hide
Query:  EMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPL
        E +++ M F   QL+ IA WP+EK   E     EV+ QL+ IP+L  +   KL+ ILF +V+ I GFLS+PL
Subjt:  EMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPL

A0A5D3BZU3 Retrotransposon protein3.1e-0643.84Show/hide
Query:  MIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP
        M+E++ +A  F   QL+ I  WP+EK   E   R EV+ QL+ IP L  +   KL+ ILF +V+ I GFLS+P
Subjt:  MIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVP

A0A5D3CT52 Retrotransposon protein1.1e-0645.21Show/hide
Query:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPL
        +E++++AM F   QL+ IA WP+EK   E   R EV+ QL+ I +L  R   KL+ ILF +V+ I GFLS+P+
Subjt:  IEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPL

A0A6J1DW73 uncharacterized protein LOC1110250188.3e-1250Show/hide
Query:  MIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRE
        M+++++T MR QT  LEK+A WP++K +++ ARRK V DQLKQIP+L+    V+LV IL TNV+K   FL VP+ +++
Subjt:  MIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAGATGCTCCAAACAGCAATGCGTTTTCAAACGATTCAGCTTGAGAAGATTGCAGCGTGGCCGGAGGAGAAGTACAAACGGGAGGCTGCACGAAGGAAAGAAGT
GCTTGACCAGCTTAAACAAATACCGGACTTGGACGGGCGTGCCATTGTAAAACTTGTACATATTTTGTTCACTAATGTTCAGAAGATCAATGGTTTCCTATCTGTCCCGC
TGCACTGGAGAGAAAGGAGAAGGGGACGGCTGCTAGCCGGTGGCCGAAATGGGTGGCAAGCGACTGACCTGCAGGTAGTCAAGGACCAAATGGAAACTAAACTTAAAAAT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGAGATGCTCCAAACAGCAATGCGTTTTCAAACGATTCAGCTTGAGAAGATTGCAGCGTGGCCGGAGGAGAAGTACAAACGGGAGGCTGCACGAAGGAAAGAAGT
GCTTGACCAGCTTAAACAAATACCGGACTTGGACGGGCGTGCCATTGTAAAACTTGTACATATTTTGTTCACTAATGTTCAGAAGATCAATGGTTTCCTATCTGTCCCGC
TGCACTGGAGAGAAAGGAGAAGGGGACGGCTGCTAGCCGGTGGCCGAAATGGGTGGCAAGCGACTGACCTGCAGGTAGTCAAGGACCAAATGGAAACTAAACTTAAAAAT
TAG
Protein sequenceShow/hide protein sequence
MIEMLQTAMRFQTIQLEKIAAWPEEKYKREAARRKEVLDQLKQIPDLDGRAIVKLVHILFTNVQKINGFLSVPLHWRERRRGRLLAGGRNGWQATDLQVVKDQMETKLKN