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Moc08g40870 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g40870
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein S23-1
Genome locationchr8:31391866..31397730
RNA-Seq ExpressionMoc08g40870
SyntenyMoc08g40870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156333.1 uncharacterized protein LOC111023254 [Momordica charantia]5.8e-4798.99Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRRILGFSDGEVMRSDATPC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_022937466.1 uncharacterized protein LOC111443868 [Cucurbita moschata]2.5e-4289.9Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_022969628.1 uncharacterized protein LOC111468599 [Cucurbita maxima]8.7e-4390.91Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_023538321.1 uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]1.9e-4289.9Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDG++MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_038889141.1 uncharacterized protein LOC120079031 [Benincasa hispida]5.5e-4594.95Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR LGFSDGEVMRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRKVV+
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

TrEMBL top hitse value%identityAlignment
A0A1S3BWM4 uncharacterized protein LOC1034939371.5e-4086.6Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A5D3BBN9 40S ribosomal protein S23-11.5e-4086.6Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A6J1DQC3 uncharacterized protein LOC1110232542.8e-4798.99Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRRILGFSDGEVMRSDATPC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

A0A6J1FAF1 uncharacterized protein LOC1114438681.2e-4289.9Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

A0A6J1I1J3 uncharacterized protein LOC1114685994.2e-4390.91Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G57540.1 unknown protein1.5e-3775Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G++MRSDA PC +LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.2 unknown protein1.5e-3775Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G++MRSDA PC +LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.3 unknown protein1.5e-3775Show/hide
Query:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G++MRSDA PC +LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGEVMRSDATPC-QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGGCTCAGCCACCCAGTGCTTGCCCTTGTCGCTGTCGCTCGGCCACACTTTTCGTGTGTCTTCCATCGCATCGTCCCCGTCCCGCCTCCTCCTACTGTCTCGAGC
CTTGAACACGCCGAACCACGAAAAGAGACACGAGGCCGACGATGACTTCCTTGGCTTCTGCTGCTTGTTGTTGCTGGATGCAGCCATGGAAGCCCTAGAAAAGGTTGCAG
AAGAAGAGGGGGATCTACGTTGGTCTTCGCTATTTTCTTGTCTTCTAATTGATATCATAAAAGGAGTAAAAGCCTCAAAGCTCATCTATCCTTTAGGAGGGGCAAAGTTT
TACATTCTCGCCTTATATATAGTATCTTTCAAGCTCCCAAGCGGCCTAGTTGGCAAGAGATTGGGATCTCTTGGTTATATTGGCTTAGAGGTTTCAAGTTCGAAACTTCT
GGTGAACTCTTCAAGAAATCTACAGATGGCACTTAGACGTATCTTAGGATTTTCAGATGGTGAGGTAATGAGGTCAGATGCTACACCCTGTCAGTTGATGAAACAGACTG
CTGGGTTATGTACTGTGGGAGGAGGACTTGCGTTCTGGATTCTCTGTAGATTACATTATGGTCCAAGAATCACAGTACCTAGGAGTCTCCGTTGGGCAGCTTGTGGAGCA
GTATCGATGAGTGCAACCTCGGCTTTGCTTGTTCGGTTATTCAGTCCAGAGTGTGAACCCCAGAATATAGCTGCTTATGATAAACGGAAAGTTGTAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGGCTCAGCCACCCAGTGCTTGCCCTTGTCGCTGTCGCTCGGCCACACTTTTCGTGTGTCTTCCATCGCATCGTCCCCGTCCCGCCTCCTCCTACTGTCTCGAGC
CTTGAACACGCCGAACCACGAAAAGAGACACGAGGCCGACGATGACTTCCTTGGCTTCTGCTGCTTGTTGTTGCTGGATGCAGCCATGGAAGCCCTAGAAAAGGTTGCAG
AAGAAGAGGGGGATCTACGTTGGTCTTCGCTATTTTCTTGTCTTCTAATTGATATCATAAAAGGAGTAAAAGCCTCAAAGCTCATCTATCCTTTAGGAGGGGCAAAGTTT
TACATTCTCGCCTTATATATAGTATCTTTCAAGCTCCCAAGCGGCCTAGTTGGCAAGAGATTGGGATCTCTTGGTTATATTGGCTTAGAGGTTTCAAGTTCGAAACTTCT
GGTGAACTCTTCAAGAAATCTACAGATGGCACTTAGACGTATCTTAGGATTTTCAGATGGTGAGGTAATGAGGTCAGATGCTACACCCTGTCAGTTGATGAAACAGACTG
CTGGGTTATGTACTGTGGGAGGAGGACTTGCGTTCTGGATTCTCTGTAGATTACATTATGGTCCAAGAATCACAGTACCTAGGAGTCTCCGTTGGGCAGCTTGTGGAGCA
GTATCGATGAGTGCAACCTCGGCTTTGCTTGTTCGGTTATTCAGTCCAGAGTGTGAACCCCAGAATATAGCTGCTTATGATAAACGGAAAGTTGTAAGGTGA
Protein sequenceShow/hide protein sequence
MPGSATQCLPLSLSLGHTFRVSSIASSPSRLLLLSRALNTPNHEKRHEADDDFLGFCCLLLLDAAMEALEKVAEEEGDLRWSSLFSCLLIDIIKGVKASKLIYPLGGAKF
YILALYIVSFKLPSGLVGKRLGSLGYIGLEVSSSKLLVNSSRNLQMALRRILGFSDGEVMRSDATPCQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA
VSMSATSALLVRLFSPECEPQNIAAYDKRKVVR