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Moc08g41580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g41580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA double-strand break repair Rad50 ATPase
Genome locationchr8:31842056..31844621
RNA-Seq ExpressionMoc08g41580
SyntenyMoc08g41580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136915.2 uncharacterized protein LOC101209598 [Cucumis sativus]1.5e-9179.55Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG
        MEEV FDH SKEKIF+IF+EFMASVAKL+ELGTLGS+ LSG +QGLELLRRP+IN +SKLIE+VIE +NTENL+SY EAGCINTHDG QSTKKLHTCR+G
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG

Query:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV
        LDDHLKKARSLIDELE L N+ NI LETEN    ST+SDED+ELDEEEATVP +K DAN+YA+ MGI+K M+KK++IMQEKIISGLSLKSSSGELETYC+
Subjt:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV

Query:  MWSLRPYIDDEIIRRAWKLV
        MWSL+PYIDDEI+R AWKLV
Subjt:  MWSLRPYIDDEIIRRAWKLV

XP_008455091.1 PREDICTED: uncharacterized protein LOC103495347 isoform X3 [Cucumis melo]4.4e-9179.09Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG
        MEEV FDH SKEKIF+IF+EFMASVAKL+ELGT GS+ LSG +QGLELLRRP+IN +SKLIE+VIET+NTENL++Y EAGCINTHDG QSTKKLHTCR+G
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG

Query:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV
        LDDHLKKARSLIDELE L N+ NI LETEN    ST+SDED+ELDEEEATVP +KLDAN+YAL MGI+K M+KK++IMQEKIISGLSLKSSSGELETYC+
Subjt:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV

Query:  MWSLRPYIDDEIIRRAWKLV
        MWSL+PYIDD I+  AWKLV
Subjt:  MWSLRPYIDDEIIRRAWKLV

XP_016901720.1 PREDICTED: uncharacterized protein LOC103495347 isoform X2 [Cucumis melo]4.1e-8976.99Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGL------ELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKL
        MEEV FDH SKEKIF+IF+EFMASVAKL+ELGT GS+ LSG +QGL      ELLRRP+IN +SKLIE+VIET+NTENL++Y EAGCINTHDG QSTKKL
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGL------ELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKL

Query:  HTCRIGLDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGE
        HTCR+GLDDHLKKARSLIDELE L N+ NI LETEN    ST+SDED+ELDEEEATVP +KLDAN+YAL MGI+K M+KK++IMQEKIISGLSLKSSSGE
Subjt:  HTCRIGLDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGE

Query:  LETYCVMWSLRPYIDDEIIRRAWKLV
        LETYC+MWSL+PYIDD I+  AWKLV
Subjt:  LETYCVMWSLRPYIDDEIIRRAWKLV

XP_022150735.1 uncharacterized protein LOC111018794 [Momordica charantia]8.0e-117100Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG
        MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG

Query:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV
        LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV
Subjt:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV

Query:  MWSLRPYIDDEIIRRAWKLVL
        MWSLRPYIDDEIIRRAWKLVL
Subjt:  MWSLRPYIDDEIIRRAWKLVL

XP_038887975.1 uncharacterized protein LOC120077932 isoform X1 [Benincasa hispida]2.8e-9381.36Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG
        MEEV FD  SKEKIF+IF+EFMASVAKLEELGTLGS+ LSG QQGLELLRRPAINR+SKLIE+VIETNNTE+L+SY EAGCINTHD VQSTKKLH+CR+G
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG

Query:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV
        LDDHLKKARS+ID+LE LLN+ NIALETEN P +STVSDED+E +E+EATVP++K DANEYAL MGIIK MVKK++ MQEKIISGLSLKSSSGELETYC+
Subjt:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV

Query:  MWSLRPYIDDEIIRRAWKLV
        MWSL+PYIDDEI+ +AWKLV
Subjt:  MWSLRPYIDDEIIRRAWKLV

TrEMBL top hitse value%identityAlignment
A0A0A0K2B6 Uncharacterized protein7.3e-9279.55Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG
        MEEV FDH SKEKIF+IF+EFMASVAKL+ELGTLGS+ LSG +QGLELLRRP+IN +SKLIE+VIE +NTENL+SY EAGCINTHDG QSTKKLHTCR+G
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG

Query:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV
        LDDHLKKARSLIDELE L N+ NI LETEN    ST+SDED+ELDEEEATVP +K DAN+YA+ MGI+K M+KK++IMQEKIISGLSLKSSSGELETYC+
Subjt:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV

Query:  MWSLRPYIDDEIIRRAWKLV
        MWSL+PYIDDEI+R AWKLV
Subjt:  MWSLRPYIDDEIIRRAWKLV

A0A1S3C033 uncharacterized protein LOC103495347 isoform X17.1e-8770.16Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGL----------------------------ELLRRPAINRSSKLIEDVIETNNTEN
        MEEV FDH SKEKIF+IF+EFMASVAKL+ELGT GS+ LSG +QGL                            ELLRRP+IN +SKLIE+VIET+NTEN
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGL----------------------------ELLRRPAINRSSKLIEDVIETNNTEN

Query:  LKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMV
        L++Y EAGCINTHDG QSTKKLHTCR+GLDDHLKKARSLIDELE L N+ NI LETEN    ST+SDED+ELDEEEATVP +KLDAN+YAL MGI+K M+
Subjt:  LKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMV

Query:  KKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
        KK++IMQEKIISGLSLKSSSGELETYC+MWSL+PYIDD I+  AWKLV
Subjt:  KKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV

A0A1S3C0U3 uncharacterized protein LOC103495347 isoform X32.1e-9179.09Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG
        MEEV FDH SKEKIF+IF+EFMASVAKL+ELGT GS+ LSG +QGLELLRRP+IN +SKLIE+VIET+NTENL++Y EAGCINTHDG QSTKKLHTCR+G
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG

Query:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV
        LDDHLKKARSLIDELE L N+ NI LETEN    ST+SDED+ELDEEEATVP +KLDAN+YAL MGI+K M+KK++IMQEKIISGLSLKSSSGELETYC+
Subjt:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV

Query:  MWSLRPYIDDEIIRRAWKLV
        MWSL+PYIDD I+  AWKLV
Subjt:  MWSLRPYIDDEIIRRAWKLV

A0A1S4E157 uncharacterized protein LOC103495347 isoform X22.0e-8976.99Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGL------ELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKL
        MEEV FDH SKEKIF+IF+EFMASVAKL+ELGT GS+ LSG +QGL      ELLRRP+IN +SKLIE+VIET+NTENL++Y EAGCINTHDG QSTKKL
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGL------ELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKL

Query:  HTCRIGLDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGE
        HTCR+GLDDHLKKARSLIDELE L N+ NI LETEN    ST+SDED+ELDEEEATVP +KLDAN+YAL MGI+K M+KK++IMQEKIISGLSLKSSSGE
Subjt:  HTCRIGLDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGE

Query:  LETYCVMWSLRPYIDDEIIRRAWKLV
        LETYC+MWSL+PYIDD I+  AWKLV
Subjt:  LETYCVMWSLRPYIDDEIIRRAWKLV

A0A6J1D9B8 uncharacterized protein LOC1110187943.9e-117100Show/hide
Query:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG
        MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG
Subjt:  MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIG

Query:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV
        LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV
Subjt:  LDDHLKKARSLIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCV

Query:  MWSLRPYIDDEIIRRAWKLVL
        MWSLRPYIDDEIIRRAWKLVL
Subjt:  MWSLRPYIDDEIIRRAWKLVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G49645.1 unknown protein5.1e-5351.42Show/hide
Query:  KEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARS
        K+KI +IF++FM  + +LEELG   + FL  FQQGL  L+RP I  SSKLIE++I+ N T  LKSY EAGCIN HD  QST+ LHT   GL DHL KA++
Subjt:  KEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARS

Query:  LIDELEHLLNNANIALETENS-PRASTVSDEDVELDEEEATVP-DEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYI
        L+ ELE L + A +A+E+     + S+   + V  DEE  TV   +  +  EYA  + +I  M+K++Y+MQ+KI+  LSLKSSSGELETY +MWSLRP++
Subjt:  LIDELEHLLNNANIALETENS-PRASTVSDEDVELDEEEATVP-DEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYI

Query:  DDEIIRRAWKLV
        +DEI+ RAWK +
Subjt:  DDEIIRRAWKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGTTACATTTGATCACAGGTCGAAAGAGAAGATTTTCAAGATTTTTGAAGAATTCATGGCTAGTGTTGCGAAGCTCGAGGAATTGGGGACTCTAGGAAGCGA
GTTTCTTTCTGGCTTTCAGCAAGGGCTTGAGCTTCTTCGACGACCTGCTATAAATAGATCATCAAAATTGATTGAGGATGTCATAGAAACTAACAATACGGAGAATCTTA
AATCATACTTTGAAGCTGGATGCATCAACACTCATGATGGTGTCCAAAGTACAAAAAAGTTGCATACATGCCGGATTGGACTGGATGATCATTTGAAAAAAGCAAGGAGC
TTAATTGATGAACTCGAACACCTACTCAATAATGCGAATATTGCATTGGAAACTGAAAATTCACCGCGTGCTTCAACTGTCTCCGATGAAGATGTAGAATTGGATGAAGA
AGAAGCAACCGTTCCAGATGAGAAACTTGATGCTAATGAATATGCTTTATTTATGGGGATCATCAAATTTATGGTCAAGAAAGACTACATAATGCAGGAGAAGATTATTT
CTGGTCTAAGTCTCAAATCATCCTCCGGGGAACTCGAAACGTACTGCGTCATGTGGTCGCTACGACCCTATATTGACGATGAAATCATACGTCGAGCTTGGAAGCTCGTT
CTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGTTACATTTGATCACAGGTCGAAAGAGAAGATTTTCAAGATTTTTGAAGAATTCATGGCTAGTGTTGCGAAGCTCGAGGAATTGGGGACTCTAGGAAGCGA
GTTTCTTTCTGGCTTTCAGCAAGGGCTTGAGCTTCTTCGACGACCTGCTATAAATAGATCATCAAAATTGATTGAGGATGTCATAGAAACTAACAATACGGAGAATCTTA
AATCATACTTTGAAGCTGGATGCATCAACACTCATGATGGTGTCCAAAGTACAAAAAAGTTGCATACATGCCGGATTGGACTGGATGATCATTTGAAAAAAGCAAGGAGC
TTAATTGATGAACTCGAACACCTACTCAATAATGCGAATATTGCATTGGAAACTGAAAATTCACCGCGTGCTTCAACTGTCTCCGATGAAGATGTAGAATTGGATGAAGA
AGAAGCAACCGTTCCAGATGAGAAACTTGATGCTAATGAATATGCTTTATTTATGGGGATCATCAAATTTATGGTCAAGAAAGACTACATAATGCAGGAGAAGATTATTT
CTGGTCTAAGTCTCAAATCATCCTCCGGGGAACTCGAAACGTACTGCGTCATGTGGTCGCTACGACCCTATATTGACGATGAAATCATACGTCGAGCTTGGAAGCTCGTT
CTGTGA
Protein sequenceShow/hide protein sequence
MEEVTFDHRSKEKIFKIFEEFMASVAKLEELGTLGSEFLSGFQQGLELLRRPAINRSSKLIEDVIETNNTENLKSYFEAGCINTHDGVQSTKKLHTCRIGLDDHLKKARS
LIDELEHLLNNANIALETENSPRASTVSDEDVELDEEEATVPDEKLDANEYALFMGIIKFMVKKDYIMQEKIISGLSLKSSSGELETYCVMWSLRPYIDDEIIRRAWKLV
L