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Moc08g43460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc08g43460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionE3 ubiquitin-protein ligase EL5
Genome locationchr8:33403156..33404645
RNA-Seq ExpressionMoc08g43460
SyntenyMoc08g43460
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030344.1 putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-6674.09Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSS--TQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVR
        MAGMLPGVECARRRRFHQSIT SD+PSTAAKLGSTRRPSFCLYTSNRDFH+TSSS  +QQRS S+QA+QN+KLGEIAREAKERLDERL+T R+PE     
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSS--TQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVR

Query:  KSRSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFP
          R K  E +  K S ++ E  KGKEE   KK  +WG   KWKA EQ+ECAVCLEGFR GEP+VHLPCAHKFHS+CLVPWLQTN+HCP CRFP
Subjt:  KSRSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFP

XP_004139268.1 probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus]5.6e-6670Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHL-TSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRK
        MAGMLPGVECARRRRFHQSI SSDSP TA K GSTRRPSFCLYTSNRDFHL +SSS+QQRS +NQA+QNDKLGEIAREAKERLDERL+T R+PE    + 
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHL-TSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRK

Query:  SRSK---REEEVRSKGSEKEGEMTKGKEEERKKKLMSWG----KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP
        +  +   +E   ++ G +KE + TKGKEEE KK+  SWG    KWKA EQ+EC+VCLE FR  EP++HLPCAHKFHS+CLVPWLQ N+HCP CRFPI+ P
Subjt:  SRSK---REEEVRSKGSEKEGEMTKGKEEERKKKLMSWG----KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP

XP_022143236.1 E3 ubiquitin-protein ligase EL5 [Momordica charantia]8.2e-102100Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS
        MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS

Query:  RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP
        RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP
Subjt:  RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP

XP_022946687.1 probable E3 ubiquitin-protein ligase RHY1A [Cucurbita moschata]1.4e-6472.02Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSS--TQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVR
        MAGMLPGVECARRRRFHQSITSSD+PSTAAKLGSTRRPSFCLYTSNRDFH+TSSS  +QQRS S+QA+QN+KLGEIAREAKERLDERL+T R+PE     
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSS--TQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVR

Query:  KSRSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFP
                       +K GE    KEE   KK  +WG   KWKA EQ+ECAVCLEGFR GEP+VHLPCAHKFHS+CLVPWLQTN+HCP CRFP
Subjt:  KSRSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFP

XP_022965966.1 probable E3 ubiquitin-protein ligase RHY1A isoform X1 [Cucurbita maxima]8.0e-6571.65Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS
        MAGMLPGVECARRRRFHQSITSS+S STAAKLGSTRR SFCLYTSNRDFHLTSSS+QQR  SN A+QN+KLG+ AREAKERLDERL+T R+PE    + S
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS

Query:  RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISA
             EEVR K      E  KGKEE   KK  SWG   KWKA EQ+EC VCLE FR  EP+VHLPCAHKFHS CLVPWLQ N+HCP CR+PI A
Subjt:  RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISA

TrEMBL top hitse value%identityAlignment
A0A0A0LG47 RING-type domain-containing protein2.7e-6670Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHL-TSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRK
        MAGMLPGVECARRRRFHQSI SSDSP TA K GSTRRPSFCLYTSNRDFHL +SSS+QQRS +NQA+QNDKLGEIAREAKERLDERL+T R+PE    + 
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHL-TSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRK

Query:  SRSK---REEEVRSKGSEKEGEMTKGKEEERKKKLMSWG----KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP
        +  +   +E   ++ G +KE + TKGKEEE KK+  SWG    KWKA EQ+EC+VCLE FR  EP++HLPCAHKFHS+CLVPWLQ N+HCP CRFPI+ P
Subjt:  SRSK---REEEVRSKGSEKEGEMTKGKEEERKKKLMSWG----KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP

A0A1S3C563 RING-H2 finger protein ATL169.6e-6469.74Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHL-TSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRK
        MAGMLPGVECARRRRFH SI SSDSPSTAAK GSTRRPSFCLYTSNRDFHL +SSS+QQRS +N+A QN+KLGEIAREAKERLDERL+T R+PE    + 
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHL-TSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRK

Query:  SRSK----REEEVRSKGSEKEGEMTKGKEEERKKKLMSWG----KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCR
        S+++    +E   ++ G  KE   TKGKEEE +K+  SWG    KWKA EQ EC+VCLE FR GEP++HLPCAHKFHS+CLVPWLQ N+HCP CR
Subjt:  SRSK----REEEVRSKGSEKEGEMTKGKEEERKKKLMSWG----KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCR

A0A6J1CPN1 E3 ubiquitin-protein ligase EL54.0e-102100Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS
        MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS

Query:  RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP
        RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP
Subjt:  RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP

A0A6J1G4D6 probable E3 ubiquitin-protein ligase RHY1A6.6e-6572.02Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSS--TQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVR
        MAGMLPGVECARRRRFHQSITSSD+PSTAAKLGSTRRPSFCLYTSNRDFH+TSSS  +QQRS S+QA+QN+KLGEIAREAKERLDERL+T R+PE     
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSS--TQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVR

Query:  KSRSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFP
                       +K GE    KEE   KK  +WG   KWKA EQ+ECAVCLEGFR GEP+VHLPCAHKFHS+CLVPWLQTN+HCP CRFP
Subjt:  KSRSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFP

A0A6J1HQI5 probable E3 ubiquitin-protein ligase RHY1A isoform X13.9e-6571.65Show/hide
Query:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS
        MAGMLPGVECARRRRFHQSITSS+S STAAKLGSTRR SFCLYTSNRDFHLTSSS+QQR  SN A+QN+KLG+ AREAKERLDERL+T R+PE    + S
Subjt:  MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKS

Query:  RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISA
             EEVR K      E  KGKEE   KK  SWG   KWKA EQ+EC VCLE FR  EP+VHLPCAHKFHS CLVPWLQ N+HCP CR+PI A
Subjt:  RSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWG---KWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISA

SwissProt top hitse value%identityAlignment
Q852U6 Probable E3 ubiquitin-protein ligase RHY1A2.0e-1050Show/hide
Query:  EQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPIS
        E ++C++CLE F  G+ ++ LPC H FHSSCL PWL+    CP CR  I+
Subjt:  EQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPIS

Q8BP31 RING finger protein 1223.8e-0945.31Show/hide
Query:  KKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP
        KKL  +G       + CAVCLE F+G + +  LPC H FH  CLV WL+    CP C  PI+ P
Subjt:  KKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP

Q8LPN7 E3 ubiquitin-protein ligase RING1-like5.9e-1046.94Show/hide
Query:  EQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPI
        E  +CAVC++ F  G  V  +PC H FH  CL+PWL+ ++ CP CRF +
Subjt:  EQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPI

Q91YL2 E3 ubiquitin-protein ligase RNF1261.1e-0855.81Show/hide
Query:  ECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCR
        EC VC E +  GE V  LPC H FH SC+VPWL+ +  CP CR
Subjt:  ECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCR

Q9H9V4 RING finger protein 1222.9e-0945.31Show/hide
Query:  KKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP
        KKL  +G       + CAVCLE F+G + +  LPC H FH  CLV WL+    CP C  PI++P
Subjt:  KKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP

Arabidopsis top hitse value%identityAlignment
AT1G49850.1 RING/U-box superfamily protein1.4e-1150Show/hide
Query:  EQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPIS
        E ++C++CLE F  G+ ++ LPC H FHSSCL PWL+    CP CR  I+
Subjt:  EQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPIS

AT2G15580.1 RING/U-box superfamily protein1.2e-3447.72Show/hide
Query:  MAGMLPGVECARRRRFH---QSITSSDSPSTAAKLGS--TRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQND---KLGEIAREAKERLDERLKTRRRP
        MAGMLPGVECARRRRFH     I SS++ S AA  G   TRRPSF LYT+N + H    S  +RS  N+++  D   KL   A+EAK+RL++RL  R  P
Subjt:  MAGMLPGVECARRRRFH---QSITSSDSPSTAAKLGS--TRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQND---KLGEIAREAKERLDERLKTRRRP

Query:  ETETVRKSRSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPI
         T    K +  + E+ + K          G ++ R  +LM W K +  EQ++CA+CL+ F+ GE +VHLPCAHKFHS CL+PWL TN +CP CR  I
Subjt:  ETETVRKSRSKREEEVRSKGSEKEGEMTKGKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPI

AT2G15580.2 RING/U-box superfamily protein9.0e-1447.71Show/hide
Query:  MAGMLPGVECARRRRFH---QSITSSDSPSTAAKLGS--TRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQND---KLGEIAREAKERLDERLKTRRRP
        MAGMLPGVECARRRRFH     I SS++ S AA  G   TRRPSF LYT+N + H    S  +RS  N+++  D   KL   A+EAK+RL++RL+   R 
Subjt:  MAGMLPGVECARRRRFH---QSITSSDSPSTAAKLGS--TRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQND---KLGEIAREAKERLDERLKTRRRP

Query:  ETETVRKSR
         +  + K++
Subjt:  ETETVRKSR

AT3G19950.1 RING/U-box superfamily protein4.2e-1146.94Show/hide
Query:  EQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPI
        E  +CAVC++ F  G  V  +PC H FH  CL+PWL+ ++ CP CRF +
Subjt:  EQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPI

AT3G58720.1 RING/U-box superfamily protein7.1e-1143.66Show/hide
Query:  GKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP
        G E  R  + +S  +    + K C+VCLE F   E V+  PC H FH  C+VPWL+T   CP CRF I  P
Subjt:  GKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAATGTTGCCGGGAGTCGAATGCGCGAGAAGGCGGCGGTTCCACCAGAGCATAACCTCGTCGGACTCGCCGTCCACGGCGGCGAAACTGGGATCCACCAGAAG
GCCCTCCTTCTGTTTGTACACCAGCAACCGCGATTTCCACCTCACTTCATCTTCTACACAGCAACGGAGCTGGTCGAATCAAGCTTTCCAGAACGATAAACTGGGTGAAA
TTGCGAGAGAAGCCAAAGAGAGGTTGGATGAGAGGTTGAAGACACGCAGAAGACCAGAGACTGAAACTGTAAGGAAGAGTAGGAGTAAGAGGGAAGAAGAAGTAAGGTCA
AAAGGGTCAGAAAAGGAAGGGGAAATGACAAAAGGCAAAGAAGAAGAGAGAAAGAAGAAGTTGATGAGTTGGGGAAAGTGGAAGGCGTGGGAGCAAAAGGAGTGCGCCGT
TTGCCTAGAAGGGTTCAGGGGTGGCGAGCCGGTGGTCCATCTGCCATGCGCCCACAAGTTCCATTCCTCCTGCCTCGTCCCTTGGCTCCAAACCAACTCCCATTGCCCTT
CTTGCAGATTCCCCATTTCCGCTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGAATGTTGCCGGGAGTCGAATGCGCGAGAAGGCGGCGGTTCCACCAGAGCATAACCTCGTCGGACTCGCCGTCCACGGCGGCGAAACTGGGATCCACCAGAAG
GCCCTCCTTCTGTTTGTACACCAGCAACCGCGATTTCCACCTCACTTCATCTTCTACACAGCAACGGAGCTGGTCGAATCAAGCTTTCCAGAACGATAAACTGGGTGAAA
TTGCGAGAGAAGCCAAAGAGAGGTTGGATGAGAGGTTGAAGACACGCAGAAGACCAGAGACTGAAACTGTAAGGAAGAGTAGGAGTAAGAGGGAAGAAGAAGTAAGGTCA
AAAGGGTCAGAAAAGGAAGGGGAAATGACAAAAGGCAAAGAAGAAGAGAGAAAGAAGAAGTTGATGAGTTGGGGAAAGTGGAAGGCGTGGGAGCAAAAGGAGTGCGCCGT
TTGCCTAGAAGGGTTCAGGGGTGGCGAGCCGGTGGTCCATCTGCCATGCGCCCACAAGTTCCATTCCTCCTGCCTCGTCCCTTGGCTCCAAACCAACTCCCATTGCCCTT
CTTGCAGATTCCCCATTTCCGCTCCTTAA
Protein sequenceShow/hide protein sequence
MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSTQQRSWSNQAFQNDKLGEIAREAKERLDERLKTRRRPETETVRKSRSKREEEVRS
KGSEKEGEMTKGKEEERKKKLMSWGKWKAWEQKECAVCLEGFRGGEPVVHLPCAHKFHSSCLVPWLQTNSHCPSCRFPISAP